RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 TRGV1A0A0A0MS02 117 aa5.98□□□□□ -1.45
CD46-208ENST00000367042 NDUFA7O95182 113 aa5.98□□□□□ -1.45
CD46-208ENST00000367042 MRPS36P82909 103 aaKnown RBP5.98□□□□□ -1.45
CD46-208ENST00000367042 A0A1W2PRX2 142 aa5.97□□□□□ -1.45
CD46-208ENST00000367042 TMEM61Q8N0U2 210 aa5.97□□□□□ -1.45
CD46-208ENST00000367042 ODF3Q96PU9 254 aa5.97□□□□□ -1.45
CD46-208ENST00000367042 CHCHD5Q9BSY4 110 aa5.97□□□□□ -1.45
CD46-208ENST00000367042 UBE2D4Q9Y2X8 147 aa5.97□□□□□ -1.45
CD46-208ENST00000367042 FN1P02751 2386 aaKnown RBP5.97□□□□□ -1.45
CD46-208ENST00000367042 CFAP46Q8IYW2 2715 aa5.97□□□□□ -1.45
CD46-208ENST00000367042 CITED1Q99966 193 aa5.97□□□□□ -1.45
CD46-208ENST00000367042 TINCRA0A1B0GVN0 87 aa5.96□□□□□ -1.45
CD46-208ENST00000367042 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.45
CD46-208ENST00000367042 LITAFQ99732 161 aa5.96□□□□□ -1.45
CD46-208ENST00000367042 SPANXA1Q9NS26 97 aa5.96□□□□□ -1.45
CD46-208ENST00000367042 PYGO1Q9Y3Y4 419 aa5.96□□□□□ -1.45
CD46-208ENST00000367042 TMEM101Q96IK0 257 aa5.96□□□□□ -1.46
CD46-208ENST00000367042 H3BT86 120 aa5.96□□□□□ -1.46
CD46-208ENST00000367042 CHCHD7Q9BUK0 85 aa5.96□□□□□ -1.46
CD46-208ENST00000367042 DOPEY1Q5JWR5 2465 aa5.95□□□□□ -1.46
CD46-208ENST00000367042 LST1O00453 97 aa5.95□□□□□ -1.46
CD46-208ENST00000367042 UBE2L6O14933 153 aa5.95□□□□□ -1.46
CD46-208ENST00000367042 COX6A2Q02221 97 aa5.95□□□□□ -1.46
CD46-208ENST00000367042 SPANXDQ9BXN6 97 aa5.95□□□□□ -1.46
CD46-208ENST00000367042 SPANXCQ9NY87 97 aa5.95□□□□□ -1.46
CD46-208ENST00000367042 CHD6Q8TD26 2715 aa5.95□□□□□ -1.46
CD46-208ENST00000367042 RS1O15537 224 aa5.95□□□□□ -1.46
CD46-208ENST00000367042 NHLRC4P0CG21 123 aaPredicted RBP5.95□□□□□ -1.46
CD46-208ENST00000367042 FAM236AA0A1B0GUQ0 79 aa5.94□□□□□ -1.46
CD46-208ENST00000367042 FAM236BA0A1B0GV22 79 aa5.94□□□□□ -1.46
CD46-208ENST00000367042 BRI3O95415 125 aa5.94□□□□□ -1.46
CD46-208ENST00000367042 INSP01308 110 aa5.94□□□□□ -1.46
CD46-208ENST00000367042 PIK3CD-AS1Q5SR53 167 aa5.94□□□□□ -1.46
CD46-208ENST00000367042 STHQ8IWL8 128 aa5.94□□□□□ -1.46
CD46-208ENST00000367042 LINC00308Q8TCZ7 52 aa5.94□□□□□ -1.46
CD46-208ENST00000367042 RBMY1BA6NDE4 496 aaKnown RBP5.94□□□□□ -1.46
CD46-208ENST00000367042 RBMY1EA6NEQ0 496 aaKnown RBP5.94□□□□□ -1.46
CD46-208ENST00000367042 RBMY1DP0C7P1 496 aaKnown RBP5.94□□□□□ -1.46
CD46-208ENST00000367042 GAGE2AQ6NT46 116 aa5.94□□□□□ -1.46
CD46-208ENST00000367042 C11orf68Q9H3H3 251 aaKnown RBP5.94□□□□□ -1.46
CD46-208ENST00000367042 Q9HAA7 133 aa5.94□□□□□ -1.46
CD46-208ENST00000367042 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.93□□□□□ -1.46
CD46-208ENST00000367042 LINC01356Q8N9X3 169 aa5.93□□□□□ -1.46
CD46-208ENST00000367042 VPREB3Q9UKI3 123 aa5.93□□□□□ -1.46
CD46-208ENST00000367042 IGSF10Q6WRI0 2623 aa5.93□□□□□ -1.46
CD46-208ENST00000367042 LINC00694P0DN24 101 aa5.93□□□□□ -1.46
CD46-208ENST00000367042 HERVK_113P63121 156 aa5.93□□□□□ -1.46
CD46-208ENST00000367042 RPL36AP83881 106 aaKnown RBP5.93□□□□□ -1.46
CD46-208ENST00000367042 RPL36ALQ969Q0 106 aaKnown RBP5.93□□□□□ -1.46
CD46-208ENST00000367042 PEMTQ9UBM1 199 aa5.93□□□□□ -1.46
CD46-208ENST00000367042 FBN2P35556 2912 aa5.93□□□□□ -1.46
CD46-208ENST00000367042 FAM104AQ969W3 186 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 MTORP42345 2549 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 TRGV2A0A075B6R0 118 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 DNAL4O96015 105 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 BAALC-AS2P0C853 105 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 Q8N2B8 174 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 OR13C6PQ8NH95 151 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 MAP6D1Q9H9H5 199 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 MXRA5Q9NR99 2828 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 NDUFA1O15239 70 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 LINC00158P58513 81 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 DAZ2Q13117 558 aaKnown RBP5.92□□□□□ -1.46
CD46-208ENST00000367042 DAZ4Q86SG3 579 aaKnown RBP5.92□□□□□ -1.46
CD46-208ENST00000367042 DAZ3Q9NR90 486 aaKnown RBP5.92□□□□□ -1.46
CD46-208ENST00000367042 TEX15Q9BXT5 2789 aa5.92□□□□□ -1.46
CD46-208ENST00000367042 CITED2Q99967 270 aaPredicted RBP5.91□□□□□ -1.46
CD46-208ENST00000367042 M0QXV9 152 aa5.91□□□□□ -1.46
CD46-208ENST00000367042 LINC00242Q5T6M2 205 aa5.91□□□□□ -1.46
CD46-208ENST00000367042 CRPP02741 224 aa5.91□□□□□ -1.46
CD46-208ENST00000367042 PFN2P35080 140 aa5.91□□□□□ -1.46
CD46-208ENST00000367042 Q6ZTI0 123 aa5.91□□□□□ -1.46
CD46-208ENST00000367042 COPS9Q8WXC6 57 aa5.91□□□□□ -1.46
CD46-208ENST00000367042 TMEM89A2RUT3 159 aa5.9□□□□□ -1.46
CD46-208ENST00000367042 COX7A2LO14548 114 aa5.9□□□□□ -1.46
CD46-208ENST00000367042 NOP10Q9NPE3 64 aaKnown RBP5.9□□□□□ -1.46
CD46-208ENST00000367042 ZNF462Q96JM2 2506 aa5.9□□□□□ -1.46
CD46-208ENST00000367042 HERV-K104P63124 156 aa5.89□□□□□ -1.47
CD46-208ENST00000367042 ZNF702PQ9H963 129 aa5.89□□□□□ -1.47
CD46-208ENST00000367042 NF1P21359 2839 aa5.89□□□□□ -1.47
CD46-208ENST00000367042 RPL35AP18077 110 aaKnown RBP5.89□□□□□ -1.47
CD46-208ENST00000367042 SOSTDC1Q6X4U4 206 aa5.89□□□□□ -1.47
CD46-208ENST00000367042 DNAJC30Q96LL9 226 aa5.89□□□□□ -1.47
CD46-208ENST00000367042 SMIM1B2RUZ4 78 aa5.89□□□□□ -1.47
CD46-208ENST00000367042 TIRAPP58753 221 aa5.89□□□□□ -1.47
CD46-208ENST00000367042 C9orf153Q5TBE3 101 aa5.89□□□□□ -1.47
CD46-208ENST00000367042 Q6Q795 121 aa5.89□□□□□ -1.47
CD46-208ENST00000367042 MIR7-3HGQ8N6C7 128 aa5.89□□□□□ -1.47
CD46-208ENST00000367042 PAX4O43316 350 aa5.88□□□□□ -1.47
CD46-208ENST00000367042 RNASE1P07998 156 aaKnown RBP5.88□□□□□ -1.47
CD46-208ENST00000367042 ACANP16112 2415 aa5.88□□□□□ -1.47
CD46-208ENST00000367042 TRGV4A0A0C4DH28 118 aa5.88□□□□□ -1.47
CD46-208ENST00000367042 K7EQD1 137 aa5.88□□□□□ -1.47
CD46-208ENST00000367042 TIMM17BO60830 172 aa5.88□□□□□ -1.47
CD46-208ENST00000367042 ATP5G1P05496 136 aa5.88□□□□□ -1.47
CD46-208ENST00000367042 LOC100131303A0A0U1RQF7 123 aa5.87□□□□□ -1.47
CD46-208ENST00000367042 C11orf72Q8NBR9 251 aa5.87□□□□□ -1.47
CD46-208ENST00000367042 C5orf38Q86SI9 138 aa5.87□□□□□ -1.47
CD46-208ENST00000367042 TMEM243Q9BU79 118 aa5.87□□□□□ -1.47
CD46-208ENST00000367042 SND1-IT1Q9HBX3 110 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms