RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 SMIM24O75264 130 aa-1.61□□□□□ -2.67
RNU6-553P-201ENST00000364047 MT-ND4LP03901 98 aa-1.61□□□□□ -2.67
RNU6-553P-201ENST00000364047 PAEPP09466 180 aa-1.61□□□□□ -2.67
RNU6-553P-201ENST00000364047 HLA-DRB4P13762 266 aa-1.61□□□□□ -2.67
RNU6-553P-201ENST00000364047 RPS29P62273 56 aaKnown RBP-1.61□□□□□ -2.67
RNU6-553P-201ENST00000364047 SAMD13Q5VXD3 122 aa-1.61□□□□□ -2.67
RNU6-553P-201ENST00000364047 ATP11AUNQ6ZP68 121 aa-1.61□□□□□ -2.67
RNU6-553P-201ENST00000364047 HLA-DRB4X5D2U9 266 aa-1.61□□□□□ -2.67
RNU6-553P-201ENST00000364047 PLXNA2O75051 1894 aa-1.61□□□□□ -2.67
RNU6-553P-201ENST00000364047 TRAV1-2A0A0B4J238 106 aa-1.62□□□□□ -2.67
RNU6-553P-201ENST00000364047 J3QLW9 94 aa-1.62□□□□□ -2.67
RNU6-553P-201ENST00000364047 EDDM3BP56851 147 aa-1.62□□□□□ -2.67
RNU6-553P-201ENST00000364047 DEFB112Q30KQ8 113 aa-1.62□□□□□ -2.67
RNU6-553P-201ENST00000364047 TMEM128Q5BJH2 165 aa-1.62□□□□□ -2.67
RNU6-553P-201ENST00000364047 Q5VV11 94 aa-1.62□□□□□ -2.67
RNU6-553P-201ENST00000364047 TOMM20LQ6UXN7 152 aa-1.62□□□□□ -2.67
RNU6-553P-201ENST00000364047 BANF2Q9H503 90 aa-1.62□□□□□ -2.67
RNU6-553P-201ENST00000364047 IQSEC2Q5JU85 1478 aa-1.63□□□□□ -2.67
RNU6-553P-201ENST00000364047 OVOS2A0A0G2JMS6 1433 aa-1.63□□□□□ -2.67
RNU6-553P-201ENST00000364047 GNG10P50151 68 aa-1.63□□□□□ -2.67
RNU6-553P-201ENST00000364047 OR8I2Q8N0Y5 310 aa-1.63□□□□□ -2.67
RNU6-553P-201ENST00000364047 CDC26Q8NHZ8 85 aa-1.63□□□□□ -2.67
RNU6-553P-201ENST00000364047 K7EP34 96 aa-1.64□□□□□ -2.67
RNU6-553P-201ENST00000364047 YPEL1O60688 119 aa-1.64□□□□□ -2.67
RNU6-553P-201ENST00000364047 CLLU1Q5K131 121 aa-1.64□□□□□ -2.67
RNU6-553P-201ENST00000364047 WFDC6Q9BQY6 131 aa-1.64□□□□□ -2.67
RNU6-553P-201ENST00000364047 AGPAT4-IT1Q9H0P7 198 aa-1.64□□□□□ -2.67
RNU6-553P-201ENST00000364047 TSC2P49815 1807 aa-1.64□□□□□ -2.67
RNU6-553P-201ENST00000364047 KDM5CP41229 1560 aa-1.64□□□□□ -2.67
RNU6-553P-201ENST00000364047 PLXNA1Q9UIW2 1896 aa-1.65□□□□□ -2.67
RNU6-553P-201ENST00000364047 KIF13AQ9H1H9 1805 aa-1.65□□□□□ -2.67
RNU6-553P-201ENST00000364047 M0R2P5 195 aa-1.65□□□□□ -2.67
RNU6-553P-201ENST00000364047 TMEM244Q5VVB8 128 aa-1.65□□□□□ -2.67
RNU6-553P-201ENST00000364047 SPCS1Q9Y6A9 102 aa-1.65□□□□□ -2.67
RNU6-553P-201ENST00000364047 TIAM2Q8IVF5 1701 aa-1.66□□□□□ -2.67
RNU6-553P-201ENST00000364047 AKAP11Q9UKA4 1901 aa-1.66□□□□□ -2.67
RNU6-553P-201ENST00000364047 USF3Q68DE3 2245 aa-1.66□□□□□ -2.68
RNU6-553P-201ENST00000364047 KNDC1Q76NI1 1749 aa-1.66□□□□□ -2.68
RNU6-553P-201ENST00000364047 ZMYM4Q5VZL5 1548 aa-1.66□□□□□ -2.68
RNU6-553P-201ENST00000364047 IBTKQ9P2D0 1353 aaPredicted RBP-1.67□□□□□ -2.68
RNU6-553P-201ENST00000364047 MYH9P35579 1960 aaKnown RBP-1.67□□□□□ -2.68
RNU6-553P-201ENST00000364047 J3KT08 172 aa-1.68□□□□□ -2.68
RNU6-553P-201ENST00000364047 WFDC9Q8NEX5 89 aa-1.68□□□□□ -2.68
RNU6-553P-201ENST00000364047 PHIPQ8WWQ0 1821 aa-1.68□□□□□ -2.68
RNU6-553P-201ENST00000364047 A0A1B0GV72 72 aa-1.69□□□□□ -2.68
RNU6-553P-201ENST00000364047 SPAARA0A1B0GVQ0 90 aa-1.69□□□□□ -2.68
RNU6-553P-201ENST00000364047 NDUFA12Q9UI09 145 aa-1.69□□□□□ -2.68
RNU6-553P-201ENST00000364047 S4R3F8 94 aa-1.69□□□□□ -2.68
RNU6-553P-201ENST00000364047 NPFFO15130 113 aa-1.7□□□□□ -2.68
RNU6-553P-201ENST00000364047 RPS28P62857 69 aaKnown RBP-1.7□□□□□ -2.68
RNU6-553P-201ENST00000364047 LINC01545Q5VT33 79 aa-1.7□□□□□ -2.68
RNU6-553P-201ENST00000364047 NRXN2Q9P2S2 1712 aa-1.7□□□□□ -2.68
RNU6-553P-201ENST00000364047 LSM2Q9Y333 95 aaKnown RBP-1.7□□□□□ -2.68
RNU6-553P-201ENST00000364047 GOLGB1Q14789 3259 aaKnown RBP-1.71□□□□□ -2.68
RNU6-553P-201ENST00000364047 S100GP29377 79 aa-1.71□□□□□ -2.68
RNU6-553P-201ENST00000364047 MAGOHBQ96A72 148 aaKnown RBP-1.71□□□□□ -2.68
RNU6-553P-201ENST00000364047 SCN3BQ9NY72 215 aa-1.71□□□□□ -2.68
RNU6-553P-201ENST00000364047 SMPXQ9UHP9 88 aa-1.71□□□□□ -2.68
RNU6-553P-201ENST00000364047 BCL9LQ86UU0 1499 aa-1.72□□□□□ -2.68
RNU6-553P-201ENST00000364047 C10orf71Q711Q0 1435 aa-1.73□□□□□ -2.69
RNU6-553P-201ENST00000364047 FAM92AA1XBS5 289 aa-1.73□□□□□ -2.69
RNU6-553P-201ENST00000364047 APOC4-APOC2K7ER74 178 aa-1.73□□□□□ -2.69
RNU6-553P-201ENST00000364047 BCE1O60756 84 aa-1.73□□□□□ -2.69
RNU6-553P-201ENST00000364047 SMIM6P0DI80 62 aa-1.73□□□□□ -2.69
RNU6-553P-201ENST00000364047 TFAMQ00059 246 aaKnown RBP-1.73□□□□□ -2.69
RNU6-553P-201ENST00000364047 CFAP126Q5VTH2 177 aa-1.73□□□□□ -2.69
RNU6-553P-201ENST00000364047 PPP1R2P3Q6NXS1 205 aa-1.73□□□□□ -2.69
RNU6-553P-201ENST00000364047 NPVFQ9HCQ7 196 aa-1.73□□□□□ -2.69
RNU6-553P-201ENST00000364047 TRAV36DV7A0A075B6V5 113 aa-1.74□□□□□ -2.69
RNU6-553P-201ENST00000364047 CLPSL1A2RUU4 121 aa-1.74□□□□□ -2.69
RNU6-553P-201ENST00000364047 TCTE3Q8IZS6 198 aa-1.74□□□□□ -2.69
RNU6-553P-201ENST00000364047 TNFSF15O95150 251 aa-1.75□□□□□ -2.69
RNU6-553P-201ENST00000364047 CMPK1P30085 196 aa-1.75□□□□□ -2.69
RNU6-553P-201ENST00000364047 BAGE3Q86Y29 109 aa-1.75□□□□□ -2.69
RNU6-553P-201ENST00000364047 C10orf82Q8WW14 230 aa-1.75□□□□□ -2.69
RNU6-553P-201ENST00000364047 RPRMQ9NS64 109 aa-1.75□□□□□ -2.69
RNU6-553P-201ENST00000364047 ERCC6Q03468 1493 aa-1.75□□□□□ -2.69
RNU6-553P-201ENST00000364047 FYCO1Q9BQS8 1478 aa-1.75□□□□□ -2.69
RNU6-553P-201ENST00000364047 BICRAQ9NZM4 1560 aa-1.76□□□□□ -2.69
RNU6-553P-201ENST00000364047 LOC730098B7Z3J9 87 aa-1.76□□□□□ -2.69
RNU6-553P-201ENST00000364047 SCTP09683 121 aa-1.76□□□□□ -2.69
RNU6-553P-201ENST00000364047 UBE2D1P51668 147 aa-1.76□□□□□ -2.69
RNU6-553P-201ENST00000364047 C9orf116Q5BN46 136 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-553P-201ENST00000364047 SKA2Q8WVK7 121 aaPredicted RBP-1.76□□□□□ -2.69
RNU6-553P-201ENST00000364047 CENPHQ9H3R5 247 aa-1.76□□□□□ -2.69
RNU6-553P-201ENST00000364047 ARHGEF5Q12774 1597 aa-1.76□□□□□ -2.69
RNU6-553P-201ENST00000364047 FXYD6-FXYD2A0A087WZ82 144 aa-1.77□□□□□ -2.69
RNU6-553P-201ENST00000364047 HAMPP81172 84 aa-1.77□□□□□ -2.69
RNU6-553P-201ENST00000364047 SPANXN1Q5VSR9 72 aa-1.77□□□□□ -2.69
RNU6-553P-201ENST00000364047 RPL7L1Q6DKI1 246 aaKnown RBP-1.77□□□□□ -2.69
RNU6-553P-201ENST00000364047 COX6B2Q6YFQ2 88 aa-1.77□□□□□ -2.69
RNU6-553P-201ENST00000364047 HIGD1AQ9Y241 93 aa-1.77□□□□□ -2.69
RNU6-553P-201ENST00000364047 NKTRP30414 1462 aaKnown RBP-1.77□□□□□ -2.69
RNU6-553P-201ENST00000364047 CICQ96RK0 1608 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-553P-201ENST00000364047 TET3O43151 1660 aa-1.77□□□□□ -2.69
RNU6-553P-201ENST00000364047 LINC00959A0A1B0GUT2 108 aa-1.78□□□□□ -2.69
RNU6-553P-201ENST00000364047 A0A1B0GX51 115 aa-1.78□□□□□ -2.69
RNU6-553P-201ENST00000364047 LYNX1G3V0Z9 82 aa-1.78□□□□□ -2.69
RNU6-553P-201ENST00000364047 H3BNG1 76 aa-1.78□□□□□ -2.69
RNU6-553P-201ENST00000364047 DCDP81605 110 aaKnown RBP-1.78□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms