RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 C1orf43Q9BWL3 253 aa4.48□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 Q9HAA7 133 aa4.48□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 CDC42SE2Q9NRR3 84 aa4.48□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 UBE2D4Q9Y2X8 147 aa4.48□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 TGP01266 2768 aa4.48□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 DYNC2H1Q8NCM8 4307 aaKnown RBP4.48□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 STAB2Q8WWQ8 2551 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 IGLV4-60A0A075B6I1 120 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 IGKV2D-24A0A075B6R9 120 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST1H2BKO60814 126 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST1H2BJP06899 126 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST1H2BOP23527 126 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST1H2BBP33778 126 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST1H2BDP58876 126 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST1H2BCP62807 126 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 MRPS36P82909 103 aaKnown RBP4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST2H2BEQ16778 126 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 TEX43Q6ZNM6 134 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST1H2BHQ93079 126 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 TIMM17AQ99595 171 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST1H2BNQ99877 126 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HIST1H2BMQ99879 126 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 HSPB8Q9UJY1 196 aa4.47□□□□□ -1.69
VTRNA3-1P-201ENST00000362552 TRAV13-1A0A0B4J241 112 aa4.46□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 EREGO14944 169 aa4.46□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 SERF1AO75920 110 aa4.46□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 LEPROTL1O95214 131 aa4.46□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 PRSS1P07477 247 aa4.46□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 CLPSL2Q6UWE3 100 aa4.46□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 ENHOQ6UWT2 76 aa4.46□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 Q6ZR54 194 aa4.46□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 Q8N3U1 123 aa4.46□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 DNAH7Q8WXX0 4024 aa4.46□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 IGLV4-3A0A075B6K6 122 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 LINC00959A0A1B0GUT2 108 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 IGIPA6NJ69 53 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 IFITM10A6NMD0 228 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 S100A2P29034 98 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 SEC11AP67812 179 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 PMCHL1Q16048 86 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 CFAP161Q6P656 301 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 Q6ZUT4 128 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 FAM19A2Q8N3H0 131 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 IFI27L1Q96BM0 104 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 URB1-AS1Q96HZ7 61 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 PRR34Q9NV39 138 aa4.45□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 IGLV10-54A0A075B6I4 117 aa4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 GAGE12HA6NDE8 117 aa4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 FABP4P15090 132 aa4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 PMVKQ15126 192 aa4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 PDZD11Q5EBL8 140 aa4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 RNASE13Q5GAN3 156 aaKnown RBP4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 LINC00336Q6ZUF6 198 aa4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 CHCHD10Q8WYQ3 142 aaPredicted RBP4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 OPRPNQ99935 248 aaPredicted RBP4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 MAP1LC3CQ9BXW4 147 aa4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 GEMIN7Q9H840 131 aaKnown RBP4.44□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 PLECQ15149 4684 aaKnown RBP4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 NUPR1O60356 82 aa4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 APOMO95445 188 aa4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 MALP21145 153 aa4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 XCL1P47992 114 aa4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 C14orf177Q52M58 125 aa4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 COA6Q5JTJ3 125 aaKnown RBP4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 BAALCQ8WXS3 180 aa4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 PACRGQ96M98 296 aaPredicted RBP4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 AMELXQ99217 191 aa4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 KRTAP1-5Q9BYS1 174 aa4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 CST9LQ9H4G1 147 aa4.43□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 PRSS29PA6NIE9 313 aa4.42□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 H0Y8G0 127 aa4.42□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 COX7A2LO14548 114 aa4.42□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 HERVK_113P63121 156 aa4.42□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 A0A096LNJ9 63 aa4.41□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 H3BRM9 83 aa4.41□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 UBE2D1P51668 147 aa4.41□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 ZC2HC1BQ5TFG8 222 aa4.41□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 C5orf38Q86SI9 138 aa4.41□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 CHTOPQ9Y3Y2 248 aaKnown RBP4.41□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 STARD9Q9P2P6 4700 aa4.41□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 VPS13DQ5THJ4 4388 aa4.41□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 ALMS1Q8TCU4 4167 aa4.4□□□□□ -1.7
VTRNA3-1P-201ENST00000362552 TRAV12-1A0A0B4J245 112 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 IGHV1-58A0A0C4DH39 117 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 A0A0J9YXV3 536 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 TMEM238LA0A1B0GVL6 79 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 TINCRA0A1B0GVN0 87 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 C20orf202A1L168 122 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 ZNF561-AS1K7EIQ3 104 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 RTL8CO15255 209 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 AKR1D1P51857 326 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 LINC00310P59036 64 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 SNRPEP62304 92 aaKnown RBP4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 FOXI1Q12951 378 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 CSMD3Q7Z407 3707 aa4.39□□□□□ -1.71
VTRNA3-1P-201ENST00000362552 A0A087WTM6 91 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms