RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 NCOR2Q9Y618 2525 aa0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 ASXL3Q9C0F0 2248 aa0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 UBE2L5PA0A1B0GUS4 154 aa0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 LOC285095A0A1B0GVY8 99 aa0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 IGLC7A0M8Q6 106 aa0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 CORTO00230 105 aa0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 GNG4P50150 75 aa0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 UBE2L3P68036 154 aaKnown RBP0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 TMEM170BQ5T4T1 132 aa0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 MYOZ3Q8TDC0 251 aa0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 LINC01558Q9Y6Z2 57 aa0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 HRNRQ86YZ3 2850 aaPredicted RBP0.12□□□□□ -2.39
RNU6-28P-201ENST00000362378 WDR7Q9Y4E6 1490 aa0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 LINC00587B1AMM8 73 aa0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 F6UZH7 168 aa0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 BCE1O60756 84 aa0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 APOC3P02656 99 aa0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 ATP5EP56381 51 aaPredicted RBP0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 HAMPP81172 84 aa0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 TMEM203Q969S6 136 aa0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 DPH3P1Q9H4G8 78 aa0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 SPCS1Q9Y6A9 102 aa0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 SSPOA2VEC9 5147 aa0.11□□□□□ -2.39
RNU6-28P-201ENST00000362378 UNC79Q9P2D8 2635 aa0.1□□□□□ -2.39
RNU6-28P-201ENST00000362378 FAM24AA6NFZ4 105 aa0.1□□□□□ -2.39
RNU6-28P-201ENST00000362378 C10orf71Q711Q0 1435 aa0.1□□□□□ -2.39
RNU6-28P-201ENST00000362378 IGSF10Q6WRI0 2623 aa0.1□□□□□ -2.39
RNU6-28P-201ENST00000362378 NHSL1Q5SYE7 1610 aa0.09□□□□□ -2.39
RNU6-28P-201ENST00000362378 TRAV22A0A0B4J277 110 aa0.09□□□□□ -2.4
RNU6-28P-201ENST00000362378 PPP3R1P63098 170 aa0.09□□□□□ -2.4
RNU6-28P-201ENST00000362378 ERCC6L2Q5T890 1561 aa0.09□□□□□ -2.4
RNU6-28P-201ENST00000362378 PSME4Q14997 1843 aa0.08□□□□□ -2.4
RNU6-28P-201ENST00000362378 SBF2Q86WG5 1849 aa0.08□□□□□ -2.4
RNU6-28P-201ENST00000362378 ARHGEF5Q12774 1597 aa0.08□□□□□ -2.4
RNU6-28P-201ENST00000362378 CACNA1CQ13936 2221 aa0.08□□□□□ -2.4
RNU6-28P-201ENST00000362378 S100A3P33764 101 aa0.08□□□□□ -2.4
RNU6-28P-201ENST00000362378 Q6JHZ5 121 aa0.08□□□□□ -2.4
RNU6-28P-201ENST00000362378 CDC42SE2Q9NRR3 84 aa0.08□□□□□ -2.4
RNU6-28P-201ENST00000362378 GNG8Q9UK08 70 aa0.08□□□□□ -2.4
RNU6-28P-201ENST00000362378 HIVEP3Q5T1R4 2406 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 NRKQ7Z2Y5 1582 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 NCOA3Q9Y6Q9 1424 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 CHKB-CPT1BH3BT56 60 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 M0R3E3 92 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 SFT2D2O95562 160 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 WFDC2Q14508 124 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 Q8IZM0 81 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 SVBPQ8N300 66 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 FAM167A-AS1Q96KT0 104 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 AHCTF1Q8WYP5 2266 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 MAPKBP1O60336 1514 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 FAM135AQ9P2D6 1515 aa0.07□□□□□ -2.4
RNU6-28P-201ENST00000362378 RAPGEF6Q8TEU7 1601 aa0.06□□□□□ -2.4
RNU6-28P-201ENST00000362378 SCAPERQ9BY12 1400 aa0.06□□□□□ -2.4
RNU6-28P-201ENST00000362378 PZPP20742 1482 aa0.06□□□□□ -2.4
RNU6-28P-201ENST00000362378 I3L2K1 104 aa0.06□□□□□ -2.4
RNU6-28P-201ENST00000362378 IFITM1P13164 125 aa0.06□□□□□ -2.4
RNU6-28P-201ENST00000362378 DCDP81605 110 aaKnown RBP0.06□□□□□ -2.4
RNU6-28P-201ENST00000362378 TP53AIP1Q9HCN2 124 aa0.06□□□□□ -2.4
RNU6-28P-201ENST00000362378 UQCR10Q9UDW1 63 aa0.06□□□□□ -2.4
RNU6-28P-201ENST00000362378 SPTBN2O15020 2390 aa0.06□□□□□ -2.4
RNU6-28P-201ENST00000362378 SHANK2Q9UPX8 1470 aa0.05□□□□□ -2.4
RNU6-28P-201ENST00000362378 CFDP00746 253 aaPredicted RBP0.05□□□□□ -2.4
RNU6-28P-201ENST00000362378 S100A1P23297 94 aa0.05□□□□□ -2.4
RNU6-28P-201ENST00000362378 MRPS10P82664 201 aaKnown RBP0.05□□□□□ -2.4
RNU6-28P-201ENST00000362378 CELSR1Q9NYQ6 3014 aa0.05□□□□□ -2.4
RNU6-28P-201ENST00000362378 TET3O43151 1660 aa0.05□□□□□ -2.4
RNU6-28P-201ENST00000362378 GNG11P61952 73 aa0.04□□□□□ -2.4
RNU6-28P-201ENST00000362378 NXT2Q9NPJ8 142 aaKnown RBP0.04□□□□□ -2.4
RNU6-28P-201ENST00000362378 ZNF292O60281 2723 aa0.04□□□□□ -2.4
RNU6-28P-201ENST00000362378 CSMD3Q7Z407 3707 aa0.03□□□□□ -2.4
RNU6-28P-201ENST00000362378 HMGXB3Q12766 1538 aa0.03□□□□□ -2.4
RNU6-28P-201ENST00000362378 MGPP08493 103 aa0.03□□□□□ -2.4
RNU6-28P-201ENST00000362378 Q5VSD8 79 aa0.03□□□□□ -2.4
RNU6-28P-201ENST00000362378 SPRR4Q96PI1 79 aa0.03□□□□□ -2.4
RNU6-28P-201ENST00000362378 DSTQ03001 7570 aaKnown RBP0.03□□□□□ -2.4
RNU6-28P-201ENST00000362378 EHBP1L1Q8N3D4 1523 aa0.03□□□□□ -2.41
RNU6-28P-201ENST00000362378 C2CD3Q4AC94 2353 aa0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 H3BQ15 152 aa0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 IGLC1P0CG04 106 aa0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 UBE2D3P61077 147 aa0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 UBE2D2P62837 147 aa0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 NSD3Q9BZ95 1437 aa0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 HUWE1Q7Z6Z7 4374 aaKnown RBP0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 ARHGAP5Q13017 1502 aa0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 DIP2CQ9Y2E4 1556 aa0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 KDM5AP29375 1690 aaKnown RBP0.02□□□□□ -2.41
RNU6-28P-201ENST00000362378 SPHKAPQ2M3C7 1700 aa0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 Q0VG73 95 aa0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 TMEM263Q8WUH6 116 aaKnown RBP0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 PAPPAQ13219 1627 aa0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 PPRC1Q5VV67 1664 aaKnown RBP0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 TCHHQ07283 1943 aa0.01□□□□□ -2.41
RNU6-28P-201ENST00000362378 UBR5O95071 2799 aaPredicted RBP0□□□□□ -2.41
RNU6-28P-201ENST00000362378 NAP1L6A6NFF2 107 aa0□□□□□ -2.41
RNU6-28P-201ENST00000362378 WHAMMP3Q1A5X7 153 aa0□□□□□ -2.41
RNU6-28P-201ENST00000362378 FAM223AQ8IWN6 122 aa0□□□□□ -2.41
RNU6-28P-201ENST00000362378 FAIMQ9NVQ4 179 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms