RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 RPL32P62910 135 aaKnown RBP12.08□□□□□ -0.48
SCAF1-201ENST00000360565 UBE2DNLQ8IWF7 75 aa12.08□□□□□ -0.48
SCAF1-201ENST00000360565 PTPRBP23467 1997 aa12.08□□□□□ -0.48
SCAF1-201ENST00000360565 LRRC75A-AS1Q8N1F1 130 aa12.08□□□□□ -0.48
SCAF1-201ENST00000360565 C9orf85Q96MD7 179 aa12.08□□□□□ -0.48
SCAF1-201ENST00000360565 AGRNO00468 2067 aa12.08□□□□□ -0.48
SCAF1-201ENST00000360565 A0A0B4J2C4 111 aa12.07□□□□□ -0.48
SCAF1-201ENST00000360565 H0YGX0 51 aa12.07□□□□□ -0.48
SCAF1-201ENST00000360565 H3BT86 120 aa12.07□□□□□ -0.48
SCAF1-201ENST00000360565 A8MZ25 164 aa12.07□□□□□ -0.48
SCAF1-201ENST00000360565 PSCAO43653 123 aa12.06□□□□□ -0.48
SCAF1-201ENST00000360565 ORMDL1Q9P0S3 153 aa12.06□□□□□ -0.48
SCAF1-201ENST00000360565 NKAPP1Q8N9T2 125 aa12.05□□□□□ -0.48
SCAF1-201ENST00000360565 PRO0255Q9UI72 69 aa12.05□□□□□ -0.48
SCAF1-201ENST00000360565 XIRP2A4UGR9 3374 aa12.05□□□□□ -0.48
SCAF1-201ENST00000360565 B5MCH6 92 aa12.05□□□□□ -0.48
SCAF1-201ENST00000360565 LECT2O14960 151 aa12.04□□□□□ -0.48
SCAF1-201ENST00000360565 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
SCAF1-201ENST00000360565 CRIP2P52943 208 aaPredicted RBP12.04□□□□□ -0.48
SCAF1-201ENST00000360565 IGKV2D-24A0A075B6R9 120 aa12.03□□□□□ -0.48
SCAF1-201ENST00000360565 PYGO1Q9Y3Y4 419 aa12.03□□□□□ -0.48
SCAF1-201ENST00000360565 IGIPA6NJ69 53 aa12.03□□□□□ -0.48
SCAF1-201ENST00000360565 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
SCAF1-201ENST00000360565 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
SCAF1-201ENST00000360565 Q9HAA7 133 aa12.03□□□□□ -0.48
SCAF1-201ENST00000360565 ACYP1P07311 99 aa12.02□□□□□ -0.48
SCAF1-201ENST00000360565 ZNF843Q8N446 348 aa12.02□□□□□ -0.48
SCAF1-201ENST00000360565 DSCR8Q96T75 97 aa12.02□□□□□ -0.49
SCAF1-201ENST00000360565 KLK12Q9UKR0 248 aa12.01□□□□□ -0.49
SCAF1-201ENST00000360565 TEX49A0A1B0GTD5 131 aa12□□□□□ -0.49
SCAF1-201ENST00000360565 TRIAP1O43715 76 aa12□□□□□ -0.49
SCAF1-201ENST00000360565 C1orf43Q9BWL3 253 aa12□□□□□ -0.49
SCAF1-201ENST00000360565 WFDC10AQ9H1F0 79 aa12□□□□□ -0.49
SCAF1-201ENST00000360565 WDFY4Q6ZS81 3184 aa12□□□□□ -0.49
SCAF1-201ENST00000360565 CAMK2N2Q96S95 79 aa12□□□□□ -0.49
SCAF1-201ENST00000360565 IGLV2-18A0A075B6J9 118 aa11.99□□□□□ -0.49
SCAF1-201ENST00000360565 KRTAP10-9P60411 292 aa11.99□□□□□ -0.49
SCAF1-201ENST00000360565 F8WEM9 126 aa11.99□□□□□ -0.49
SCAF1-201ENST00000360565 LINC00308Q8TCZ7 52 aa11.99□□□□□ -0.49
SCAF1-201ENST00000360565 TIRAPP58753 221 aa11.98□□□□□ -0.49
SCAF1-201ENST00000360565 SPAG11BQ08648 103 aa11.98□□□□□ -0.49
SCAF1-201ENST00000360565 PIK3CD-AS1Q5SR53 167 aa11.98□□□□□ -0.49
SCAF1-201ENST00000360565 FAM222AQ5U5X8 452 aa11.98□□□□□ -0.49
SCAF1-201ENST00000360565 MT-ATP8P03928 68 aa11.98□□□□□ -0.49
SCAF1-201ENST00000360565 LINC01006Q8NI28 216 aa11.97□□□□□ -0.49
SCAF1-201ENST00000360565 SPANXCQ9NY87 97 aa11.97□□□□□ -0.49
SCAF1-201ENST00000360565 CENPEQ02224 2701 aa11.97□□□□□ -0.49
SCAF1-201ENST00000360565 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
SCAF1-201ENST00000360565 IGKV3D-7A0A0C4DH55 119 aa11.96□□□□□ -0.49
SCAF1-201ENST00000360565 INSL3P51460 131 aa11.96□□□□□ -0.49
SCAF1-201ENST00000360565 MRAPQ8TCY5 172 aa11.96□□□□□ -0.49
SCAF1-201ENST00000360565 UBE2D4Q9Y2X8 147 aa11.96□□□□□ -0.5
SCAF1-201ENST00000360565 FAM236AA0A1B0GUQ0 79 aa11.95□□□□□ -0.5
SCAF1-201ENST00000360565 FAM236BA0A1B0GV22 79 aa11.95□□□□□ -0.5
SCAF1-201ENST00000360565 NDUFA1O15239 70 aa11.95□□□□□ -0.5
SCAF1-201ENST00000360565 LINC00269Q8N2A0 174 aa11.95□□□□□ -0.5
SCAF1-201ENST00000360565 UFSP1Q6NVU6 142 aa11.95□□□□□ -0.5
SCAF1-201ENST00000360565 NCR3O14931 201 aa11.95□□□□□ -0.5
SCAF1-201ENST00000360565 SPANXDQ9BXN6 97 aa11.95□□□□□ -0.5
SCAF1-201ENST00000360565 TRBV6-8A0A0A6YYG3 113 aa11.94□□□□□ -0.5
SCAF1-201ENST00000360565 LINC00482Q8N8I6 264 aa11.94□□□□□ -0.5
SCAF1-201ENST00000360565 TRBV30A0A0K0K1B3 111 aa11.94□□□□□ -0.5
SCAF1-201ENST00000360565 ODF3L2Q3SX64 289 aa11.94□□□□□ -0.5
SCAF1-201ENST00000360565 TMEM126AQ9H061 195 aa11.94□□□□□ -0.5
SCAF1-201ENST00000360565 MGAQ8IWI9 3026 aa11.94□□□□□ -0.5
SCAF1-201ENST00000360565 TRBV6-4A0A1B0GX49 114 aa11.93□□□□□ -0.5
SCAF1-201ENST00000360565 BRI3O95415 125 aa11.93□□□□□ -0.5
SCAF1-201ENST00000360565 CXCL5P42830 114 aa11.93□□□□□ -0.5
SCAF1-201ENST00000360565 IGLV4-69A0A075B6H9 119 aa11.93□□□□□ -0.5
SCAF1-201ENST00000360565 LOC100131303A0A0U1RQF7 123 aa11.93□□□□□ -0.5
SCAF1-201ENST00000360565 SS18L2Q9UHA2 77 aa11.92□□□□□ -0.5
SCAF1-201ENST00000360565 VPS13AQ96RL7 3174 aa11.92□□□□□ -0.5
SCAF1-201ENST00000360565 MRPS36P82909 103 aaKnown RBP11.92□□□□□ -0.5
SCAF1-201ENST00000360565 TSPEAR-AS2P59090 65 aa11.91□□□□□ -0.5
SCAF1-201ENST00000360565 POM121L12Q8N7R1 296 aa11.91□□□□□ -0.5
SCAF1-201ENST00000360565 DEFB105AQ8NG35 78 aa11.91□□□□□ -0.5
SCAF1-201ENST00000360565 C14orf132Q9NPU4 83 aa11.9□□□□□ -0.5
SCAF1-201ENST00000360565 REG3AQ06141 175 aa11.9□□□□□ -0.51
SCAF1-201ENST00000360565 UBE2D1P51668 147 aa11.89□□□□□ -0.51
SCAF1-201ENST00000360565 RMI2Q96E14 147 aa11.89□□□□□ -0.51
SCAF1-201ENST00000360565 SZT2Q5T011 3432 aa11.89□□□□□ -0.51
SCAF1-201ENST00000360565 NDUFA7O95182 113 aa11.88□□□□□ -0.51
SCAF1-201ENST00000360565 CHCHD10Q8WYQ3 142 aaPredicted RBP11.88□□□□□ -0.51
SCAF1-201ENST00000360565 H7C423 109 aa11.88□□□□□ -0.51
SCAF1-201ENST00000360565 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
SCAF1-201ENST00000360565 INAFM1C9JVW0 142 aa11.87□□□□□ -0.51
SCAF1-201ENST00000360565 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
SCAF1-201ENST00000360565 RPL18AQ02543 176 aaKnown RBP11.87□□□□□ -0.51
SCAF1-201ENST00000360565 ZNF580Q9UK33 172 aa11.87□□□□□ -0.51
SCAF1-201ENST00000360565 TIMM17BO60830 172 aa11.87□□□□□ -0.51
SCAF1-201ENST00000360565 BBC3Q96PG8 261 aaPredicted RBP11.87□□□□□ -0.51
SCAF1-201ENST00000360565 JMJD7-PLA2G4BH0Y9G9 81 aa11.87□□□□□ -0.51
SCAF1-201ENST00000360565 LYRM9A8MSI8 78 aa11.86□□□□□ -0.51
SCAF1-201ENST00000360565 TRACP01848 142 aa11.86□□□□□ -0.51
SCAF1-201ENST00000360565 LINC00242Q5T6M2 205 aa11.85□□□□□ -0.51
SCAF1-201ENST00000360565 RNF183Q96D59 192 aa11.85□□□□□ -0.51
SCAF1-201ENST00000360565 A0A1B0GX51 115 aa11.85□□□□□ -0.51
SCAF1-201ENST00000360565 LINC00643Q86TS7 51 aa11.85□□□□□ -0.51
SCAF1-201ENST00000360565 KIF25-AS1Q9Y6Z4 181 aa11.85□□□□□ -0.51
SCAF1-201ENST00000360565 FLNBO75369 2602 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms