RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 PAX4O43316 350 aa7.61□□□□□ -1.19
TRAPPC4-201ENST00000359005 NHLRC4P0CG21 123 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC4-201ENST00000359005 COX8AP10176 69 aa7.61□□□□□ -1.19
TRAPPC4-201ENST00000359005 ZC2HC1BQ5TFG8 222 aa7.61□□□□□ -1.19
TRAPPC4-201ENST00000359005 Q8NAQ8 132 aa7.61□□□□□ -1.19
TRAPPC4-201ENST00000359005 PHLDA1Q8WV24 401 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC4-201ENST00000359005 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
TRAPPC4-201ENST00000359005 LINC00587B1AMM8 73 aa7.6□□□□□ -1.19
TRAPPC4-201ENST00000359005 ATP6V0E2Q8NHE4 81 aa7.6□□□□□ -1.19
TRAPPC4-201ENST00000359005 C14orf144Q96I85 54 aa7.6□□□□□ -1.19
TRAPPC4-201ENST00000359005 CHCHD7Q9BUK0 85 aa7.6□□□□□ -1.19
TRAPPC4-201ENST00000359005 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
TRAPPC4-201ENST00000359005 TRAV26-1A0A087WT03 109 aa7.59□□□□□ -1.19
TRAPPC4-201ENST00000359005 IGHV3-38A0A0C4DH36 116 aa7.59□□□□□ -1.19
TRAPPC4-201ENST00000359005 C11orf86A6NJI1 115 aa7.59□□□□□ -1.19
TRAPPC4-201ENST00000359005 NMUP48645 174 aa7.59□□□□□ -1.19
TRAPPC4-201ENST00000359005 MAJINQ3KP22 176 aa7.59□□□□□ -1.19
TRAPPC4-201ENST00000359005 OR5A1Q8NGJ0 315 aa7.59□□□□□ -1.19
TRAPPC4-201ENST00000359005 SPATA25Q9BR10 227 aa7.59□□□□□ -1.19
TRAPPC4-201ENST00000359005 UBE2D4Q9Y2X8 147 aa7.59□□□□□ -1.19
TRAPPC4-201ENST00000359005 H3BRM9 83 aa7.58□□□□□ -1.2
TRAPPC4-201ENST00000359005 GYPEP15421 78 aa7.58□□□□□ -1.2
TRAPPC4-201ENST00000359005 MRPL23Q16540 153 aaKnown RBP7.58□□□□□ -1.2
TRAPPC4-201ENST00000359005 NFE4Q86UQ8 179 aa7.58□□□□□ -1.2
TRAPPC4-201ENST00000359005 AMELXQ99217 191 aa7.58□□□□□ -1.2
TRAPPC4-201ENST00000359005 NACAE9PAV3 2078 aa7.58□□□□□ -1.2
TRAPPC4-201ENST00000359005 TRBV6-8A0A0A6YYG3 113 aa7.57□□□□□ -1.2
TRAPPC4-201ENST00000359005 F5H768 121 aa7.57□□□□□ -1.2
TRAPPC4-201ENST00000359005 H3BNG1 76 aa7.57□□□□□ -1.2
TRAPPC4-201ENST00000359005 FGF6P10767 208 aa7.57□□□□□ -1.2
TRAPPC4-201ENST00000359005 TMEM170BQ5T4T1 132 aa7.57□□□□□ -1.2
TRAPPC4-201ENST00000359005 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
TRAPPC4-201ENST00000359005 STPG4Q8N801 248 aa7.57□□□□□ -1.2
TRAPPC4-201ENST00000359005 CHAC1Q9BUX1 264 aa7.57□□□□□ -1.2
TRAPPC4-201ENST00000359005 GEMIN7Q9H840 131 aaKnown RBP7.57□□□□□ -1.2
TRAPPC4-201ENST00000359005 ICOSQ9Y6W8 199 aa7.57□□□□□ -1.2
TRAPPC4-201ENST00000359005 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC4-201ENST00000359005 TINCRA0A1B0GVN0 87 aa7.56□□□□□ -1.2
TRAPPC4-201ENST00000359005 IGKV2-29A2NJV5 120 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC4-201ENST00000359005 E9PLD3 99 aa7.56□□□□□ -1.2
TRAPPC4-201ENST00000359005 LINC00694P0DN24 101 aa7.56□□□□□ -1.2
TRAPPC4-201ENST00000359005 HERVK_113P63121 156 aa7.56□□□□□ -1.2
TRAPPC4-201ENST00000359005 TM2D3Q9BRN9 247 aa7.56□□□□□ -1.2
TRAPPC4-201ENST00000359005 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
TRAPPC4-201ENST00000359005 HYDINQ4G0P3 5121 aa7.55□□□□□ -1.2
TRAPPC4-201ENST00000359005 CCL25O15444 150 aa7.55□□□□□ -1.2
TRAPPC4-201ENST00000359005 CTAG1AP78358 180 aa7.55□□□□□ -1.2
TRAPPC4-201ENST00000359005 ANKRD39Q53RE8 183 aa7.55□□□□□ -1.2
TRAPPC4-201ENST00000359005 DEFB104AQ8WTQ1 72 aa7.55□□□□□ -1.2
TRAPPC4-201ENST00000359005 PLEKHB2Q96CS7 222 aa7.55□□□□□ -1.2
TRAPPC4-201ENST00000359005 HIGD1BQ9P298 99 aa7.55□□□□□ -1.2
TRAPPC4-201ENST00000359005 LYSTQ99698 3801 aa7.55□□□□□ -1.2
TRAPPC4-201ENST00000359005 DEFB4AO15263 64 aa7.54□□□□□ -1.2
TRAPPC4-201ENST00000359005 TIRAPP58753 221 aa7.54□□□□□ -1.2
TRAPPC4-201ENST00000359005 RETNQ9HD89 108 aa7.54□□□□□ -1.2
TRAPPC4-201ENST00000359005 EPPK1P58107 5090 aaKnown RBP7.53□□□□□ -1.2
TRAPPC4-201ENST00000359005 IGLV4-69A0A075B6H9 119 aa7.53□□□□□ -1.2
TRAPPC4-201ENST00000359005 LGALS3P17931 250 aaKnown RBP7.53□□□□□ -1.2
TRAPPC4-201ENST00000359005 Q9UF83 564 aa7.53□□□□□ -1.2
TRAPPC4-201ENST00000359005 TRAV8-6A0A0B4J262 113 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 A0A1B0GUV1 79 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 LEPROTO15243 131 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 HTN3P15516 51 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 HSD52Q0P140 79 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 TAL2Q16559 108 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 COL5A1-AS1Q5SY13 56 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 CASC10Q5T4H9 136 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 NTM-AS1Q6ZSK4 140 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 FAM19A3Q7Z5A8 133 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 C11orf45Q8TAV5 145 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 MUC7Q8TAX7 377 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 OPRPNQ99935 248 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
TRAPPC4-201ENST00000359005 A0A0J9YXV3 536 aa7.51□□□□□ -1.21
TRAPPC4-201ENST00000359005 LOC100131303A0A0U1RQF7 123 aa7.51□□□□□ -1.21
TRAPPC4-201ENST00000359005 MYMXA0A1B0GTQ4 84 aa7.51□□□□□ -1.21
TRAPPC4-201ENST00000359005 A6NDN8 102 aa7.51□□□□□ -1.21
TRAPPC4-201ENST00000359005 TMEM262E9PQX1 116 aa7.51□□□□□ -1.21
TRAPPC4-201ENST00000359005 UBE2D1P51668 147 aa7.51□□□□□ -1.21
TRAPPC4-201ENST00000359005 SCGB1D4Q6XE38 83 aa7.51□□□□□ -1.21
TRAPPC4-201ENST00000359005 Q6ZUT4 128 aa7.51□□□□□ -1.21
TRAPPC4-201ENST00000359005 LINC00469Q8N7U9 141 aa7.51□□□□□ -1.21
TRAPPC4-201ENST00000359005 CELA1Q9UNI1 258 aa7.51□□□□□ -1.21
TRAPPC4-201ENST00000359005 ALMS1Q8TCU4 4167 aa7.5□□□□□ -1.21
TRAPPC4-201ENST00000359005 A0A0J9YY99 117 aa7.5□□□□□ -1.21
TRAPPC4-201ENST00000359005 TMEM223A0PJW6 202 aa7.5□□□□□ -1.21
TRAPPC4-201ENST00000359005 C3orf84H3BNL1 204 aa7.5□□□□□ -1.21
TRAPPC4-201ENST00000359005 ZNF22P17026 224 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC4-201ENST00000359005 GCSHP23434 173 aa7.5□□□□□ -1.21
TRAPPC4-201ENST00000359005 GAGE6Q13070 117 aa7.5□□□□□ -1.21
TRAPPC4-201ENST00000359005 C12orf74Q32Q52 190 aa7.5□□□□□ -1.21
TRAPPC4-201ENST00000359005 ZFAND6Q6FIF0 208 aa7.5□□□□□ -1.21
TRAPPC4-201ENST00000359005 CEMP1Q6PRD7 247 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC4-201ENST00000359005 ZNF815PA8K554 130 aa7.49□□□□□ -1.21
TRAPPC4-201ENST00000359005 J3QQQ9 107 aa7.49□□□□□ -1.21
TRAPPC4-201ENST00000359005 SS18Q15532 418 aa7.49□□□□□ -1.21
TRAPPC4-201ENST00000359005 BATFQ16520 125 aa7.49□□□□□ -1.21
TRAPPC4-201ENST00000359005 LELP1Q5T871 98 aa7.49□□□□□ -1.21
TRAPPC4-201ENST00000359005 PCP2Q8IVA1 136 aa7.49□□□□□ -1.21
TRAPPC4-201ENST00000359005 VSIG2Q96IQ7 327 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms