RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 K7ERJ3 54 aa12.63□□□□□ -0.39
NPAS3-202ENST00000356141 TMEM170BQ5T4T1 132 aa12.63□□□□□ -0.39
NPAS3-202ENST00000356141 C11orf86A6NJI1 115 aa12.63□□□□□ -0.39
NPAS3-202ENST00000356141 F8VRH5 84 aa12.63□□□□□ -0.39
NPAS3-202ENST00000356141 H3BMG7 143 aa12.63□□□□□ -0.39
NPAS3-202ENST00000356141 IGIPA6NJ69 53 aa12.62□□□□□ -0.39
NPAS3-202ENST00000356141 TMEM263Q8WUH6 116 aaKnown RBP12.62□□□□□ -0.39
NPAS3-202ENST00000356141 SMIM13P0DJ93 91 aa12.62□□□□□ -0.39
NPAS3-202ENST00000356141 A0A096LPF7 62 aa12.61□□□□□ -0.39
NPAS3-202ENST00000356141 GCSHP23434 173 aa12.61□□□□□ -0.39
NPAS3-202ENST00000356141 SLC25A29Q8N8R3 303 aa12.61□□□□□ -0.39
NPAS3-202ENST00000356141 CSNK1G2-AS1Q8NCQ2 148 aa12.61□□□□□ -0.39
NPAS3-202ENST00000356141 ZMAT4Q9H898 229 aa12.61□□□□□ -0.39
NPAS3-202ENST00000356141 PLAC8L1A1L4L8 177 aa12.61□□□□□ -0.39
NPAS3-202ENST00000356141 KRTAP24-1Q3LI83 254 aa12.61□□□□□ -0.39
NPAS3-202ENST00000356141 LINC00467Q9BRT7 94 aa12.6□□□□□ -0.39
NPAS3-202ENST00000356141 TRBV6-5A0A0K0K1A5 114 aa12.6□□□□□ -0.39
NPAS3-202ENST00000356141 F8W1H4 67 aa12.59□□□□□ -0.39
NPAS3-202ENST00000356141 C20orf203Q8NBC4 194 aa12.59□□□□□ -0.39
NPAS3-202ENST00000356141 A0A0J9YXV3 536 aa12.59□□□□□ -0.39
NPAS3-202ENST00000356141 RS1O15537 224 aa12.59□□□□□ -0.39
NPAS3-202ENST00000356141 TIRAPP58753 221 aa12.58□□□□□ -0.4
NPAS3-202ENST00000356141 IGLV4-69A0A075B6H9 119 aa12.58□□□□□ -0.4
NPAS3-202ENST00000356141 XGP55808 180 aa12.58□□□□□ -0.4
NPAS3-202ENST00000356141 NBEAL1Q6ZS30 2694 aa12.58□□□□□ -0.4
NPAS3-202ENST00000356141 A0A1B0GWB2 263 aa12.57□□□□□ -0.4
NPAS3-202ENST00000356141 C9orf66Q5T8R8 295 aa12.57□□□□□ -0.4
NPAS3-202ENST00000356141 TRGV4A0A0C4DH28 118 aa12.57□□□□□ -0.4
NPAS3-202ENST00000356141 IGKV3OR2-268A0A0C4DH90 116 aa12.57□□□□□ -0.4
NPAS3-202ENST00000356141 CCDC179H3BU77 68 aa12.57□□□□□ -0.4
NPAS3-202ENST00000356141 PMVKQ15126 192 aa12.57□□□□□ -0.4
NPAS3-202ENST00000356141 APOMO95445 188 aa12.57□□□□□ -0.4
NPAS3-202ENST00000356141 PRADC1Q9BSG0 188 aa12.57□□□□□ -0.4
NPAS3-202ENST00000356141 F5H768 121 aa12.56□□□□□ -0.4
NPAS3-202ENST00000356141 LINC00694P0DN24 101 aa12.56□□□□□ -0.4
NPAS3-202ENST00000356141 PLNP26678 52 aa12.56□□□□□ -0.4
NPAS3-202ENST00000356141 CDIP1Q9H305 208 aa12.56□□□□□ -0.4
NPAS3-202ENST00000356141 Q6ZUT4 128 aa12.56□□□□□ -0.4
NPAS3-202ENST00000356141 TENM3Q9P273 2699 aa12.55□□□□□ -0.4
NPAS3-202ENST00000356141 IGLV4-3A0A075B6K6 122 aa12.55□□□□□ -0.4
NPAS3-202ENST00000356141 TRBV25-1A0A075B6N4 114 aa12.55□□□□□ -0.4
NPAS3-202ENST00000356141 SMIM9A6NGZ8 99 aa12.55□□□□□ -0.4
NPAS3-202ENST00000356141 A8MZ25 164 aa12.55□□□□□ -0.4
NPAS3-202ENST00000356141 PRB2P02812 416 aaPredicted RBP12.55□□□□□ -0.4
NPAS3-202ENST00000356141 FXYD2P54710 66 aa12.55□□□□□ -0.4
NPAS3-202ENST00000356141 CHAC1Q9BUX1 264 aa12.55□□□□□ -0.4
NPAS3-202ENST00000356141 TM2D2Q9BX73 214 aa12.55□□□□□ -0.4
NPAS3-202ENST00000356141 NHP2Q9NX24 153 aaKnown RBP12.55□□□□□ -0.4
NPAS3-202ENST00000356141 C16orf74Q96GX8 76 aa12.54□□□□□ -0.4
NPAS3-202ENST00000356141 CHCHD7Q9BUK0 85 aa12.54□□□□□ -0.4
NPAS3-202ENST00000356141 TRAV12-1A0A0B4J245 112 aa12.54□□□□□ -0.4
NPAS3-202ENST00000356141 IL17DQ8TAD2 202 aa12.54□□□□□ -0.4
NPAS3-202ENST00000356141 K7EQD1 137 aa12.53□□□□□ -0.4
NPAS3-202ENST00000356141 RHODO00212 210 aa12.53□□□□□ -0.4
NPAS3-202ENST00000356141 PLEKHB2Q96CS7 222 aa12.53□□□□□ -0.4
NPAS3-202ENST00000356141 MGAM2Q2M2H8 2515 aa12.53□□□□□ -0.4
NPAS3-202ENST00000356141 TRBV20-1A0A075B6N2 111 aa12.53□□□□□ -0.4
NPAS3-202ENST00000356141 NHLRC4P0CG21 123 aaPredicted RBP12.53□□□□□ -0.4
NPAS3-202ENST00000356141 HTN3P15516 51 aa12.53□□□□□ -0.4
NPAS3-202ENST00000356141 TSPEAR-AS2P59090 65 aa12.53□□□□□ -0.4
NPAS3-202ENST00000356141 C3orf56Q8N813 242 aa12.52□□□□□ -0.4
NPAS3-202ENST00000356141 FAM104AQ969W3 186 aa12.52□□□□□ -0.41
NPAS3-202ENST00000356141 CMYA5Q8N3K9 4069 aa12.52□□□□□ -0.41
NPAS3-202ENST00000356141 TRBV7-3A0A075B6L6 115 aa12.52□□□□□ -0.41
NPAS3-202ENST00000356141 A0A0J9YY99 117 aa12.52□□□□□ -0.41
NPAS3-202ENST00000356141 CMC4P56277 68 aaPredicted RBP12.52□□□□□ -0.41
NPAS3-202ENST00000356141 DNHD1Q96M86 4753 aa12.51□□□□□ -0.41
NPAS3-202ENST00000356141 TRAV8-3A0A0A6YYJ7 113 aa12.51□□□□□ -0.41
NPAS3-202ENST00000356141 ZNF815PA8K554 130 aa12.51□□□□□ -0.41
NPAS3-202ENST00000356141 RHOHQ15669 191 aa12.51□□□□□ -0.41
NPAS3-202ENST00000356141 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
NPAS3-202ENST00000356141 NTM-AS1Q6ZSK4 140 aa12.51□□□□□ -0.41
NPAS3-202ENST00000356141 RETNQ9HD89 108 aa12.51□□□□□ -0.41
NPAS3-202ENST00000356141 ZFAND6Q6FIF0 208 aa12.51□□□□□ -0.41
NPAS3-202ENST00000356141 PRIMA1Q86XR5 153 aa12.51□□□□□ -0.41
NPAS3-202ENST00000356141 TIMM17AQ99595 171 aa12.51□□□□□ -0.41
NPAS3-202ENST00000356141 RPL36AP83881 106 aaKnown RBP12.5□□□□□ -0.41
NPAS3-202ENST00000356141 SCGB1D4Q6XE38 83 aa12.5□□□□□ -0.41
NPAS3-202ENST00000356141 RPL36ALQ969Q0 106 aaKnown RBP12.5□□□□□ -0.41
NPAS3-202ENST00000356141 TRAV4A0A0B4J268 109 aa12.5□□□□□ -0.41
NPAS3-202ENST00000356141 FOXI1Q12951 378 aa12.5□□□□□ -0.41
NPAS3-202ENST00000356141 FAM222AQ5U5X8 452 aa12.5□□□□□ -0.41
NPAS3-202ENST00000356141 X6R8D5 127 aa12.5□□□□□ -0.41
NPAS3-202ENST00000356141 A0A0U1RRA0 63 aa12.49□□□□□ -0.41
NPAS3-202ENST00000356141 TMEM141Q96I45 108 aa12.49□□□□□ -0.41
NPAS3-202ENST00000356141 TRAV13-1A0A0B4J241 112 aa12.49□□□□□ -0.41
NPAS3-202ENST00000356141 IGHV4-30-4P0DP06 118 aa12.49□□□□□ -0.41
NPAS3-202ENST00000356141 UBE2D4Q9Y2X8 147 aa12.48□□□□□ -0.41
NPAS3-202ENST00000356141 DAZ2Q13117 558 aaKnown RBP12.48□□□□□ -0.41
NPAS3-202ENST00000356141 HIST1H4GQ99525 98 aa12.48□□□□□ -0.41
NPAS3-202ENST00000356141 SFTA2Q6UW10 78 aa12.47□□□□□ -0.41
NPAS3-202ENST00000356141 CELA1Q9UNI1 258 aa12.47□□□□□ -0.41
NPAS3-202ENST00000356141 MYMXA0A1B0GTQ4 84 aa12.46□□□□□ -0.42
NPAS3-202ENST00000356141 KRTAP10-11P60412 298 aa12.46□□□□□ -0.42
NPAS3-202ENST00000356141 FHL2Q14192 279 aa12.46□□□□□ -0.42
NPAS3-202ENST00000356141 IGLL5B9A064 214 aa12.45□□□□□ -0.42
NPAS3-202ENST00000356141 IGHV4-28A0A0C4DH34 117 aa12.45□□□□□ -0.42
NPAS3-202ENST00000356141 ZNF22P17026 224 aaPredicted RBP12.45□□□□□ -0.42
NPAS3-202ENST00000356141 NFE4Q86UQ8 179 aa12.44□□□□□ -0.42
NPAS3-202ENST00000356141 E9PLD3 99 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms