RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ZNF727A8MUV8 499 aa9.86□□□□□ -0.83
DDX55-202ENST00000354291 HIGD1CA8MV81 97 aa9.86□□□□□ -0.83
DDX55-202ENST00000354291 FGF6P10767 208 aa9.86□□□□□ -0.83
DDX55-202ENST00000354291 ZNF25P17030 456 aaPredicted RBP9.86□□□□□ -0.83
DDX55-202ENST00000354291 TMEM191AQ9H0A3 160 aa9.86□□□□□ -0.83
DDX55-202ENST00000354291 ST20Q9HBF5 79 aa9.86□□□□□ -0.83
DDX55-202ENST00000354291 OSTCQ9NRP0 149 aa9.86□□□□□ -0.83
DDX55-202ENST00000354291 STPG4Q8N801 248 aa9.85□□□□□ -0.83
DDX55-202ENST00000354291 CHCHD10Q8WYQ3 142 aaPredicted RBP9.85□□□□□ -0.83
DDX55-202ENST00000354291 BTF3L4Q96K17 158 aa9.85□□□□□ -0.83
DDX55-202ENST00000354291 SRP19P09132 144 aaKnown RBP9.84□□□□□ -0.83
DDX55-202ENST00000354291 SRSF9Q13242 221 aaKnown RBP eCLIP9.84□□□□□ -0.831e-6■■■■□ 21.5
DDX55-202ENST00000354291 TMEM101Q96IK0 257 aa9.84□□□□□ -0.83
DDX55-202ENST00000354291 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
DDX55-202ENST00000354291 OR5A1Q8NGJ0 315 aa9.83□□□□□ -0.84
DDX55-202ENST00000354291 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
DDX55-202ENST00000354291 ESDP10768 282 aa9.82□□□□□ -0.84
DDX55-202ENST00000354291 RAB4AP20338 218 aa9.82□□□□□ -0.84
DDX55-202ENST00000354291 RPS10P46783 165 aaKnown RBP9.82□□□□□ -0.84
DDX55-202ENST00000354291 FAM74A3Q4VXF1 159 aa9.82□□□□□ -0.84
DDX55-202ENST00000354291 PRSS3P2Q8NHM4 247 aa9.82□□□□□ -0.84
DDX55-202ENST00000354291 TRBV27A0A0K0K1C4 114 aa9.81□□□□□ -0.84
DDX55-202ENST00000354291 TSHBP01222 138 aa9.81□□□□□ -0.84
DDX55-202ENST00000354291 POLR2KP53803 58 aaKnown RBP9.81□□□□□ -0.84
DDX55-202ENST00000354291 RIGQ13278 110 aa9.81□□□□□ -0.84
DDX55-202ENST00000354291 TMEM241Q24JQ0 296 aa9.81□□□□□ -0.84
DDX55-202ENST00000354291 V9GYV3 84 aa9.81□□□□□ -0.84
DDX55-202ENST00000354291 PPP1R17O96001 155 aa9.8□□□□□ -0.84
DDX55-202ENST00000354291 HIGD2BQ4VC39 106 aa9.8□□□□□ -0.84
DDX55-202ENST00000354291 AMN1Q8IY45 258 aa9.8□□□□□ -0.84
DDX55-202ENST00000354291 TMEM242Q9NWH2 141 aa9.8□□□□□ -0.84
DDX55-202ENST00000354291 GVQW2A0A096LPI5 108 aaPredicted RBP9.79□□□□□ -0.84
DDX55-202ENST00000354291 LINC00959A0A1B0GUT2 108 aa9.79□□□□□ -0.84
DDX55-202ENST00000354291 VCYO14598 125 aa9.79□□□□□ -0.84
DDX55-202ENST00000354291 FOXI1Q12951 378 aa9.79□□□□□ -0.84
DDX55-202ENST00000354291 MRPL52Q86TS9 123 aaKnown RBP9.79□□□□□ -0.84
DDX55-202ENST00000354291 NUP35Q8NFH5 326 aa9.79□□□□□ -0.84
DDX55-202ENST00000354291 ISOC2Q96AB3 205 aa9.79□□□□□ -0.84
DDX55-202ENST00000354291 NAT8BQ9UHF3 227 aa9.79□□□□□ -0.84
DDX55-202ENST00000354291 XCL1P47992 114 aa9.78□□□□□ -0.84
DDX55-202ENST00000354291 SS18Q15532 418 aa9.78□□□□□ -0.84
DDX55-202ENST00000354291 LCE2AQ5TA79 106 aaPredicted RBP9.78□□□□□ -0.84
DDX55-202ENST00000354291 Q6ZRP5 223 aa9.78□□□□□ -0.84
DDX55-202ENST00000354291 CDC42SE2Q9NRR3 84 aa9.78□□□□□ -0.84
DDX55-202ENST00000354291 C7orf77A4D0Y5 90 aa9.77□□□□□ -0.85
DDX55-202ENST00000354291 CCL25O15444 150 aa9.77□□□□□ -0.85
DDX55-202ENST00000354291 RPL23P62829 140 aaKnown RBP9.77□□□□□ -0.85
DDX55-202ENST00000354291 SMAGPQ0VAQ4 97 aa9.77□□□□□ -0.85
DDX55-202ENST00000354291 FCER1GP30273 86 aa9.76□□□□□ -0.85
DDX55-202ENST00000354291 ZNF664Q8N3J9 261 aa9.76□□□□□ -0.85
DDX55-202ENST00000354291 KIR2DL4Q99706 377 aa9.76□□□□□ -0.85
DDX55-202ENST00000354291 NAT8Q9UHE5 227 aa9.76□□□□□ -0.85
DDX55-202ENST00000354291 IGHV1-58A0A0C4DH39 117 aa9.75□□□□□ -0.85
DDX55-202ENST00000354291 A0A1B0GVG6 124 aa9.75□□□□□ -0.85
DDX55-202ENST00000354291 SMKR1H3BMG3 65 aa9.75□□□□□ -0.85
DDX55-202ENST00000354291 PPP1R2P9O14990 202 aa9.75□□□□□ -0.85
DDX55-202ENST00000354291 SUMO2P61956 95 aaKnown RBP9.75□□□□□ -0.85
DDX55-202ENST00000354291 PEA15Q15121 130 aa9.75□□□□□ -0.85
DDX55-202ENST00000354291 ADIRFQ15847 76 aa9.75□□□□□ -0.85
DDX55-202ENST00000354291 PRR4Q16378 134 aa9.75□□□□□ -0.85
DDX55-202ENST00000354291 CD164L2Q6UWJ8 174 aa9.75□□□□□ -0.85
DDX55-202ENST00000354291 SMDT1Q9H4I9 107 aa9.75□□□□□ -0.85
DDX55-202ENST00000354291 PKIGQ9Y2B9 76 aa9.75□□□□□ -0.85
DDX55-202ENST00000354291 CSDC2Q9Y534 153 aaKnown RBP9.75□□□□□ -0.85
DDX55-202ENST00000354291 A0A096LNI7 61 aa9.74□□□□□ -0.85
DDX55-202ENST00000354291 A0A1B0GW15 77 aa9.74□□□□□ -0.85
DDX55-202ENST00000354291 SMIM27A0A1W2PRY6 76 aa9.74□□□□□ -0.85
DDX55-202ENST00000354291 LINC00862A6NCI5 91 aa9.74□□□□□ -0.85
DDX55-202ENST00000354291 FAM104BQ5XKR9 115 aa9.74□□□□□ -0.85
DDX55-202ENST00000354291 NRACQ8N912 160 aa9.74□□□□□ -0.85
DDX55-202ENST00000354291 C1orf196B1AJZ1 125 aa9.73□□□□□ -0.85
DDX55-202ENST00000354291 LINC00474Q9P2X8 69 aa9.73□□□□□ -0.85
DDX55-202ENST00000354291 C9JQL5 133 aa9.72□□□□□ -0.85
DDX55-202ENST00000354291 ZNF561-AS1K7EIQ3 104 aa9.72□□□□□ -0.85
DDX55-202ENST00000354291 CAMPP49913 170 aa9.72□□□□□ -0.85
DDX55-202ENST00000354291 MRPL51Q4U2R6 128 aaKnown RBP9.72□□□□□ -0.85
DDX55-202ENST00000354291 TMEM18Q96B42 140 aa9.72□□□□□ -0.85
DDX55-202ENST00000354291 C20orf78Q9BR46 151 aa9.72□□□□□ -0.85
DDX55-202ENST00000354291 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
DDX55-202ENST00000354291 TRBV24-1A0A075B6N3 115 aa9.71□□□□□ -0.86
DDX55-202ENST00000354291 TCAPO15273 167 aa9.71□□□□□ -0.86
DDX55-202ENST00000354291 CKS2P33552 79 aa9.71□□□□□ -0.86
DDX55-202ENST00000354291 PRR26Q8N8Z3 221 aa9.71□□□□□ -0.86
DDX55-202ENST00000354291 UBE2D4Q9Y2X8 147 aa9.71□□□□□ -0.86
DDX55-202ENST00000354291 S100A8P05109 93 aa9.7□□□□□ -0.86
DDX55-202ENST00000354291 MALP21145 153 aa9.7□□□□□ -0.86
DDX55-202ENST00000354291 SRSF3P84103 164 aaKnown RBP9.7□□□□□ -0.86
DDX55-202ENST00000354291 CARD19Q96LW7 228 aa9.7□□□□□ -0.86
DDX55-202ENST00000354291 F8W036 122 aa9.69□□□□□ -0.86
DDX55-202ENST00000354291 COX7A2LO14548 114 aa9.69□□□□□ -0.86
DDX55-202ENST00000354291 RPL32P62910 135 aaKnown RBP9.69□□□□□ -0.86
DDX55-202ENST00000354291 SYCNQ0VAF6 134 aa9.69□□□□□ -0.86
DDX55-202ENST00000354291 LINC00526Q96FQ7 95 aa9.69□□□□□ -0.86
DDX55-202ENST00000354291 TIMM21Q9BVV7 248 aa9.69□□□□□ -0.86
DDX55-202ENST00000354291 TRAV13-1A0A0B4J241 112 aa9.67□□□□□ -0.86
DDX55-202ENST00000354291 TNFRSF6BO95407 300 aa9.67□□□□□ -0.86
DDX55-202ENST00000354291 HBBP68871 147 aa9.67□□□□□ -0.86
DDX55-202ENST00000354291 PPBPP02775 128 aa9.66□□□□□ -0.86
DDX55-202ENST00000354291 RNASE13Q5GAN3 156 aaKnown RBP9.66□□□□□ -0.86
DDX55-202ENST00000354291 MRPL54Q6P161 138 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms