RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 HINT1P49773 126 aaPredicted RBP5.82□□□□□ -1.48
CD44-205ENST00000352818 RPL39P62891 51 aaKnown RBP5.82□□□□□ -1.48
CD44-205ENST00000352818 BATFQ16520 125 aa5.82□□□□□ -1.48
CD44-205ENST00000352818 BVES-AS1Q5T3Y7 98 aa5.82□□□□□ -1.48
CD44-205ENST00000352818 WFDC10AQ9H1F0 79 aa5.82□□□□□ -1.48
CD44-205ENST00000352818 CST9LQ9H4G1 147 aa5.82□□□□□ -1.48
CD44-205ENST00000352818 TP73-AS1Q9UF72 201 aa5.82□□□□□ -1.48
CD44-205ENST00000352818 IGLV4-69A0A075B6H9 119 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 IGKV2D-26A0A0A0MRZ7 120 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 TRGV1A0A0A0MS02 117 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 E9PLD3 99 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 NMUP48645 174 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 SEC11AP67812 179 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 HSD52Q0P140 79 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 MPV17L2Q567V2 206 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 TMEM97Q5BJF2 176 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 GTSCR1Q86UQ5 136 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 NFE4Q86UQ8 179 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 PCP2Q8IVA1 136 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 OR4C5Q8NGB2 326 aa5.81□□□□□ -1.48
CD44-205ENST00000352818 IGLV4-3A0A075B6K6 122 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 IGHV3OR16-12A0A075B7B8 117 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 IGHV3-73A0A0B4J1V6 119 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 C11orf86A6NJI1 115 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 K7EQD1 137 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 RPL35AP18077 110 aaKnown RBP5.8□□□□□ -1.48
CD44-205ENST00000352818 RRN3P1Q2M238 152 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 Q6ZSN1 163 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 Q6ZTI0 123 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 CHCHD7Q9BUK0 85 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 TIMM21Q9BVV7 248 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 SPANXA1Q9NS26 97 aa5.8□□□□□ -1.48
CD44-205ENST00000352818 SMIM9A6NGZ8 99 aa5.79□□□□□ -1.48
CD44-205ENST00000352818 HERVK_113P61574 105 aa5.79□□□□□ -1.48
CD44-205ENST00000352818 GAGE1Q13065 139 aa5.79□□□□□ -1.48
CD44-205ENST00000352818 COTL1Q14019 142 aa5.79□□□□□ -1.48
CD44-205ENST00000352818 TAL2Q16559 108 aa5.79□□□□□ -1.48
CD44-205ENST00000352818 LINC00612Q8N6U2 182 aa5.79□□□□□ -1.48
CD44-205ENST00000352818 OR11H2Q8NH07 326 aa5.79□□□□□ -1.48
CD44-205ENST00000352818 AMELXQ99217 191 aa5.79□□□□□ -1.48
CD44-205ENST00000352818 TRBV7-3A0A075B6L6 115 aa5.78□□□□□ -1.48
CD44-205ENST00000352818 TRBV25-1A0A075B6N4 114 aa5.78□□□□□ -1.48
CD44-205ENST00000352818 TRBV6-4A0A1B0GX49 114 aa5.78□□□□□ -1.48
CD44-205ENST00000352818 MRPS36P82909 103 aaKnown RBP5.78□□□□□ -1.48
CD44-205ENST00000352818 RPL36AP83881 106 aaKnown RBP5.78□□□□□ -1.48
CD44-205ENST00000352818 DAZ4Q86SG3 579 aaKnown RBP5.78□□□□□ -1.48
CD44-205ENST00000352818 KIR2DL5BQ8NHK3 375 aa5.78□□□□□ -1.48
CD44-205ENST00000352818 ORAOV1Q8WV07 137 aa5.78□□□□□ -1.48
CD44-205ENST00000352818 RPL36ALQ969Q0 106 aaKnown RBP5.78□□□□□ -1.48
CD44-205ENST00000352818 CHAC1Q9BUX1 264 aa5.78□□□□□ -1.48
CD44-205ENST00000352818 NOP10Q9NPE3 64 aaKnown RBP5.78□□□□□ -1.48
CD44-205ENST00000352818 DAZ3Q9NR90 486 aaKnown RBP5.78□□□□□ -1.48
CD44-205ENST00000352818 COX11Q9Y6N1 276 aa5.78□□□□□ -1.48
CD44-205ENST00000352818 MYMXA0A1B0GTQ4 84 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 A6NDN8 102 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 INAFM2P0DMQ5 153 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 UBE2D3P61077 147 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 UBE2D2P62837 147 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 SMAGPQ0VAQ4 97 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 FAM104AQ969W3 186 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 ZNF479Q96JC4 524 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 PRADC1Q9BSG0 188 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 GTSF1LQ9H1H1 148 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 UBE2D4Q9Y2X8 147 aa5.77□□□□□ -1.49
CD44-205ENST00000352818 KLK5Q9Y337 293 aaPredicted RBP5.77□□□□□ -1.49
CD44-205ENST00000352818 TAX1BP3O14907 124 aa5.76□□□□□ -1.49
CD44-205ENST00000352818 LINC00694P0DN24 101 aa5.76□□□□□ -1.49
CD44-205ENST00000352818 APOC4P55056 127 aa5.76□□□□□ -1.49
CD44-205ENST00000352818 SLC25A29Q8N8R3 303 aa5.76□□□□□ -1.49
CD44-205ENST00000352818 ZNRF2Q8NHG8 242 aa5.76□□□□□ -1.49
CD44-205ENST00000352818 TM2D2Q9BX73 214 aa5.76□□□□□ -1.49
CD44-205ENST00000352818 VCX2Q9H322 139 aa5.76□□□□□ -1.49
CD44-205ENST00000352818 Q9UF83 564 aa5.76□□□□□ -1.49
CD44-205ENST00000352818 CSDC2Q9Y534 153 aaKnown RBP5.76□□□□□ -1.49
CD44-205ENST00000352818 X6R8D5 127 aa5.76□□□□□ -1.49
CD44-205ENST00000352818 TRGV2A0A075B6R0 118 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 TRAV8-6A0A0B4J262 113 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 KRTAP9-6A0A140TA67 174 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 TINCRA0A1B0GVN0 87 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 TMEM223A0PJW6 202 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 GAGE12BA1L429 117 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 LEPROTO15243 131 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 GAGE7O76087 117 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 GAGE12FP0CL80 117 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 GAGE12GP0CL81 117 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 GAGE12IP0CL82 117 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 ZNF22P17026 224 aaPredicted RBP5.75□□□□□ -1.49
CD44-205ENST00000352818 TCTAP57738 103 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 TTTY13Q9BZ97 58 aa5.75□□□□□ -1.49
CD44-205ENST00000352818 A0A0J9YWU9 116 aa5.74□□□□□ -1.49
CD44-205ENST00000352818 LYRM9A8MSI8 78 aa5.74□□□□□ -1.49
CD44-205ENST00000352818 H3BRM9 83 aa5.74□□□□□ -1.49
CD44-205ENST00000352818 H7C423 109 aa5.74□□□□□ -1.49
CD44-205ENST00000352818 ZNF25P17030 456 aaPredicted RBP5.74□□□□□ -1.49
CD44-205ENST00000352818 FAM19A3Q7Z5A8 133 aa5.74□□□□□ -1.49
CD44-205ENST00000352818 CEND1Q8N111 149 aa5.74□□□□□ -1.49
CD44-205ENST00000352818 DEFB104AQ8WTQ1 72 aa5.74□□□□□ -1.49
CD44-205ENST00000352818 PHLDA1Q8WV24 401 aaPredicted RBP5.74□□□□□ -1.49
CD44-205ENST00000352818 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms