RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ATRQ13535 2644 aa10.05□□□□□ -0.8
SMC6-201ENST00000351948 NCR3O14931 201 aa10.05□□□□□ -0.8
SMC6-201ENST00000351948 CRIP2P52943 208 aaPredicted RBP10.05□□□□□ -0.8
SMC6-201ENST00000351948 KIR2DL5BA0A0G2JN68 375 aa10.05□□□□□ -0.8
SMC6-201ENST00000351948 KIR2DL5BA0A0G2JPC4 375 aa10.05□□□□□ -0.8
SMC6-201ENST00000351948 CFC1BP0CG36 223 aa10.05□□□□□ -0.8
SMC6-201ENST00000351948 CFC1P0CG37 223 aa10.05□□□□□ -0.8
SMC6-201ENST00000351948 FXYD2P54710 66 aa10.05□□□□□ -0.8
SMC6-201ENST00000351948 KIR2DL5AQ8N109 375 aa10.05□□□□□ -0.8
SMC6-201ENST00000351948 OVOL2Q9BRP0 275 aa10.05□□□□□ -0.8
SMC6-201ENST00000351948 FLNAP21333 2647 aaKnown RBP10.05□□□□□ -0.8
SMC6-201ENST00000351948 IGLV1-51P01701 117 aa10.04□□□□□ -0.8
SMC6-201ENST00000351948 CDKN2A-AS1Q9UH64 79 aa10.04□□□□□ -0.8
SMC6-201ENST00000351948 MAST4O15021 2626 aa10.04□□□□□ -0.8
SMC6-201ENST00000351948 NANOS2P60321 138 aaKnown RBP10.04□□□□□ -0.8
SMC6-201ENST00000351948 ZFAND6Q6FIF0 208 aa10.04□□□□□ -0.8
SMC6-201ENST00000351948 MIR7-3HGQ8N6C7 128 aa10.04□□□□□ -0.8
SMC6-201ENST00000351948 MAP1AP78559 2803 aaPredicted RBP10.04□□□□□ -0.8
SMC6-201ENST00000351948 BRI3O95415 125 aa10.04□□□□□ -0.8
SMC6-201ENST00000351948 TINCRA0A1B0GVN0 87 aa10.04□□□□□ -0.8
SMC6-201ENST00000351948 A0A1W2PPM0 123 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 SIVA1O15304 175 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 CRYGDP07320 174 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 TIRAPP58753 221 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 E9PLD3 99 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 PCP4P48539 62 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 CARD19Q96LW7 228 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 A0A0J9YWU9 116 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 LECT2O14960 151 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 AGRNO00468 2067 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 RS1O15537 224 aa10.03□□□□□ -0.8
SMC6-201ENST00000351948 TRBV6-8A0A0A6YYG3 113 aa10.02□□□□□ -0.8
SMC6-201ENST00000351948 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.8
SMC6-201ENST00000351948 LINC00526Q96FQ7 95 aa10.02□□□□□ -0.8
SMC6-201ENST00000351948 ITPR3Q14573 2671 aa10.02□□□□□ -0.81
SMC6-201ENST00000351948 IGHV1-58A0A0C4DH39 117 aa10.02□□□□□ -0.81
SMC6-201ENST00000351948 PRSS47A8MTI9 375 aa10.02□□□□□ -0.81
SMC6-201ENST00000351948 M0R2N4 97 aa10.02□□□□□ -0.81
SMC6-201ENST00000351948 NPSP0C0P6 89 aa10.02□□□□□ -0.81
SMC6-201ENST00000351948 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.81
SMC6-201ENST00000351948 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
SMC6-201ENST00000351948 COL6A3P12111 3177 aa10.01□□□□□ -0.81
SMC6-201ENST00000351948 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
SMC6-201ENST00000351948 KPRPQ5T749 579 aaPredicted RBP10.01□□□□□ -0.81
SMC6-201ENST00000351948 TM2D2Q9BX73 214 aa10.01□□□□□ -0.81
SMC6-201ENST00000351948 RNF183Q96D59 192 aa10.01□□□□□ -0.81
SMC6-201ENST00000351948 CLUHP3Q96NS8 147 aa10.01□□□□□ -0.81
SMC6-201ENST00000351948 TRBV6-4A0A1B0GX49 114 aa10.01□□□□□ -0.81
SMC6-201ENST00000351948 IGLV2-33A0A075B6J2 118 aaPredicted RBP10□□□□□ -0.81
SMC6-201ENST00000351948 ETDCA0A1B0GVM5 59 aa10□□□□□ -0.81
SMC6-201ENST00000351948 CDK2AP2O75956 126 aa10□□□□□ -0.81
SMC6-201ENST00000351948 A8MZ25 164 aa10□□□□□ -0.81
SMC6-201ENST00000351948 AKAP13Q12802 2813 aa10□□□□□ -0.81
SMC6-201ENST00000351948 C9orf85Q96MD7 179 aa9.99□□□□□ -0.81
SMC6-201ENST00000351948 C16orf95Q9H693 158 aa9.99□□□□□ -0.81
SMC6-201ENST00000351948 NRACQ8N912 160 aa9.99□□□□□ -0.81
SMC6-201ENST00000351948 SOCS3O14543 225 aa9.99□□□□□ -0.81
SMC6-201ENST00000351948 K7EP34 96 aa9.98□□□□□ -0.81
SMC6-201ENST00000351948 RBX1P62877 108 aa9.98□□□□□ -0.81
SMC6-201ENST00000351948 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
SMC6-201ENST00000351948 KIR2DL5BQ8NHK3 375 aa9.98□□□□□ -0.81
SMC6-201ENST00000351948 YPEL4Q96NS1 127 aa9.98□□□□□ -0.81
SMC6-201ENST00000351948 SIGMAR1Q99720 223 aa9.98□□□□□ -0.81
SMC6-201ENST00000351948 LAMA1P25391 3075 aa9.98□□□□□ -0.81
SMC6-201ENST00000351948 CELSR3Q9NYQ7 3312 aa9.98□□□□□ -0.81
SMC6-201ENST00000351948 C1orf158Q8N1D5 194 aa9.97□□□□□ -0.81
SMC6-201ENST00000351948 TRAV10A0A0B4J240 114 aa9.97□□□□□ -0.81
SMC6-201ENST00000351948 TSHBP01222 138 aa9.97□□□□□ -0.81
SMC6-201ENST00000351948 TRBV27A0A0K0K1C4 114 aa9.96□□□□□ -0.81
SMC6-201ENST00000351948 IFITM1P13164 125 aa9.96□□□□□ -0.81
SMC6-201ENST00000351948 HAMPP81172 84 aa9.96□□□□□ -0.81
SMC6-201ENST00000351948 IL17DQ8TAD2 202 aa9.96□□□□□ -0.81
SMC6-201ENST00000351948 NTN5Q8WTR8 489 aaPredicted RBP9.96□□□□□ -0.81
SMC6-201ENST00000351948 ZNF22P17026 224 aaPredicted RBP9.96□□□□□ -0.82
SMC6-201ENST00000351948 TEP1Q99973 2627 aaKnown RBP9.96□□□□□ -0.82
SMC6-201ENST00000351948 XAGE1AQ9HD64 81 aa9.95□□□□□ -0.82
SMC6-201ENST00000351948 IGKV2D-26A0A0A0MRZ7 120 aa9.95□□□□□ -0.82
SMC6-201ENST00000351948 K7EP13 123 aa9.95□□□□□ -0.82
SMC6-201ENST00000351948 U3KQK5 164 aa9.94□□□□□ -0.82
SMC6-201ENST00000351948 BAALC-AS2P0C853 105 aa9.94□□□□□ -0.82
SMC6-201ENST00000351948 SPATA12Q7Z6I5 190 aa9.93□□□□□ -0.82
SMC6-201ENST00000351948 DSCR8Q96T75 97 aa9.93□□□□□ -0.82
SMC6-201ENST00000351948 A0A0J9YXY3 114 aa9.93□□□□□ -0.82
SMC6-201ENST00000351948 INAFM2P0DMQ5 153 aa9.93□□□□□ -0.82
SMC6-201ENST00000351948 CLEC2BQ92478 149 aa9.93□□□□□ -0.82
SMC6-201ENST00000351948 G3V4G9 280 aa9.92□□□□□ -0.82
SMC6-201ENST00000351948 CXCL5P42830 114 aa9.92□□□□□ -0.82
SMC6-201ENST00000351948 DNAH14Q0VDD8 3507 aa9.92□□□□□ -0.82
SMC6-201ENST00000351948 POLR2KP53803 58 aaKnown RBP9.92□□□□□ -0.82
SMC6-201ENST00000351948 Q6ZTC4 211 aa9.92□□□□□ -0.82
SMC6-201ENST00000351948 LY6G6CO95867 125 aa9.91□□□□□ -0.82
SMC6-201ENST00000351948 TRBV6-5A0A0K0K1A5 114 aa9.91□□□□□ -0.82
SMC6-201ENST00000351948 UBE2AP49459 152 aa9.91□□□□□ -0.82
SMC6-201ENST00000351948 PIK3CD-AS1Q5SR53 167 aa9.91□□□□□ -0.82
SMC6-201ENST00000351948 MAPKAPK5-AS1Q8N8E1 139 aa9.91□□□□□ -0.82
SMC6-201ENST00000351948 CRYBA4P53673 196 aa9.91□□□□□ -0.82
SMC6-201ENST00000351948 ANAPC13Q9BS18 74 aa9.91□□□□□ -0.82
SMC6-201ENST00000351948 ZNF580Q9UK33 172 aa9.91□□□□□ -0.82
SMC6-201ENST00000351948 F8W1H4 67 aa9.9□□□□□ -0.82
SMC6-201ENST00000351948 PPDPFLQ8WWR9 84 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms