RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 DEFB131BA0A096LNP1 70 aa13.88□□□□□ -0.19
UBE3C-201ENST00000348165 LYRM9A8MSI8 78 aa13.87□□□□□ -0.19
UBE3C-201ENST00000348165 HCFC1P51610 2035 aa13.87□□□□□ -0.19
UBE3C-201ENST00000348165 C3orf22Q8N5N4 141 aa13.87□□□□□ -0.19
UBE3C-201ENST00000348165 V9GYY9 64 aa13.87□□□□□ -0.19
UBE3C-201ENST00000348165 AVPP01185 164 aa13.87□□□□□ -0.19
UBE3C-201ENST00000348165 PROK1P58294 105 aa13.86□□□□□ -0.19
UBE3C-201ENST00000348165 SHISA2Q6UWI4 295 aa13.86□□□□□ -0.19
UBE3C-201ENST00000348165 WFDC9Q8NEX5 89 aa13.86□□□□□ -0.19
UBE3C-201ENST00000348165 NFE4Q86UQ8 179 aa13.86□□□□□ -0.19
UBE3C-201ENST00000348165 CDKN2A-AS1Q9UH64 79 aa13.86□□□□□ -0.19
UBE3C-201ENST00000348165 SVIPQ8NHG7 77 aa13.86□□□□□ -0.19
UBE3C-201ENST00000348165 WFDC10AQ9H1F0 79 aa13.85□□□□□ -0.19
UBE3C-201ENST00000348165 DIRC1Q969H9 104 aa13.85□□□□□ -0.19
UBE3C-201ENST00000348165 NEXN-AS1Q8NBZ9 246 aa13.85□□□□□ -0.19
UBE3C-201ENST00000348165 MTORP42345 2549 aa13.84□□□□□ -0.19
UBE3C-201ENST00000348165 KRTAP10-9P60411 292 aa13.84□□□□□ -0.19
UBE3C-201ENST00000348165 PRB2P02812 416 aaPredicted RBP13.84□□□□□ -0.19
UBE3C-201ENST00000348165 CFAP126Q5VTH2 177 aa13.84□□□□□ -0.19
UBE3C-201ENST00000348165 SPATA25Q9BR10 227 aa13.84□□□□□ -0.19
UBE3C-201ENST00000348165 MRPL55Q7Z7F7 128 aaKnown RBP13.84□□□□□ -0.19
UBE3C-201ENST00000348165 TEX49A0A1B0GTD5 131 aa13.83□□□□□ -0.19
UBE3C-201ENST00000348165 JMJD7-PLA2G4BH0Y9G9 81 aa13.83□□□□□ -0.19
UBE3C-201ENST00000348165 Q8N976 141 aa13.83□□□□□ -0.2
UBE3C-201ENST00000348165 CHCHD10Q8WYQ3 142 aaPredicted RBP13.83□□□□□ -0.2
UBE3C-201ENST00000348165 M0QY20 66 aa13.82□□□□□ -0.2
UBE3C-201ENST00000348165 A0A0U1RQV1 116 aa13.82□□□□□ -0.2
UBE3C-201ENST00000348165 NREPQ16612 68 aa13.81□□□□□ -0.2
UBE3C-201ENST00000348165 FAM236DA0A1B0GTK5 79 aa13.81□□□□□ -0.2
UBE3C-201ENST00000348165 PRM2P04554 102 aa13.81□□□□□ -0.2
UBE3C-201ENST00000348165 FAM236CP0DP71 79 aa13.81□□□□□ -0.2
UBE3C-201ENST00000348165 HILS1P60008 231 aa13.81□□□□□ -0.2
UBE3C-201ENST00000348165 A0A0J9YXY3 114 aa13.81□□□□□ -0.2
UBE3C-201ENST00000348165 IGLV2-11P01706 119 aa13.81□□□□□ -0.2
UBE3C-201ENST00000348165 C20orf197Q8N268 126 aa13.81□□□□□ -0.2
UBE3C-201ENST00000348165 TNRC6BQ9UPQ9 1833 aaKnown RBP13.8□□□□□ -0.2
UBE3C-201ENST00000348165 IL17DQ8TAD2 202 aa13.8□□□□□ -0.2
UBE3C-201ENST00000348165 IGLV4-3A0A075B6K6 122 aa13.8□□□□□ -0.2
UBE3C-201ENST00000348165 CRYGDP07320 174 aa13.8□□□□□ -0.2
UBE3C-201ENST00000348165 SMR3AQ99954 134 aa13.8□□□□□ -0.2
UBE3C-201ENST00000348165 NDUFA7O95182 113 aa13.79□□□□□ -0.2
UBE3C-201ENST00000348165 MIFP14174 115 aa13.79□□□□□ -0.2
UBE3C-201ENST00000348165 MIAQ16674 131 aa13.79□□□□□ -0.2
UBE3C-201ENST00000348165 PLA2G2AP14555 144 aa13.78□□□□□ -0.2
UBE3C-201ENST00000348165 IGLV1-40P01703 118 aa13.78□□□□□ -0.2
UBE3C-201ENST00000348165 PRR9Q5T870 116 aa13.78□□□□□ -0.2
UBE3C-201ENST00000348165 BBC3Q96PG8 261 aaPredicted RBP13.78□□□□□ -0.2
UBE3C-201ENST00000348165 CCDC179H3BU77 68 aa13.78□□□□□ -0.2
UBE3C-201ENST00000348165 TRAV23DV6A0A075B6W5 121 aa13.78□□□□□ -0.2
UBE3C-201ENST00000348165 TRBV6-8A0A0A6YYG3 113 aa13.77□□□□□ -0.2
UBE3C-201ENST00000348165 UFSP1Q6NVU6 142 aa13.77□□□□□ -0.2
UBE3C-201ENST00000348165 RNF185Q96GF1 192 aa13.77□□□□□ -0.2
UBE3C-201ENST00000348165 C11orf21Q9P2W6 132 aa13.77□□□□□ -0.2
UBE3C-201ENST00000348165 MP68P56378 58 aa13.77□□□□□ -0.2
UBE3C-201ENST00000348165 A0A1W2PPR1 153 aa13.77□□□□□ -0.21
UBE3C-201ENST00000348165 ZNF22P17026 224 aaPredicted RBP13.77□□□□□ -0.21
UBE3C-201ENST00000348165 HIGD2AQ9BW72 106 aa13.76□□□□□ -0.21
UBE3C-201ENST00000348165 NDUFB1O75438 58 aa13.76□□□□□ -0.21
UBE3C-201ENST00000348165 RNASE3P12724 160 aaKnown RBP13.76□□□□□ -0.21
UBE3C-201ENST00000348165 TRBV6-4A0A1B0GX49 114 aa13.76□□□□□ -0.21
UBE3C-201ENST00000348165 C14orf132Q9NPU4 83 aa13.75□□□□□ -0.21
UBE3C-201ENST00000348165 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.75□□□□□ -0.21
UBE3C-201ENST00000348165 FAM240AA0A1B0GVK7 77 aa13.75□□□□□ -0.21
UBE3C-201ENST00000348165 COX7BP24311 80 aa13.75□□□□□ -0.21
UBE3C-201ENST00000348165 MPLKIPQ8TAP9 179 aa13.75□□□□□ -0.21
UBE3C-201ENST00000348165 XGP55808 180 aa13.74□□□□□ -0.21
UBE3C-201ENST00000348165 IGKV2D-26A0A0A0MRZ7 120 aa13.74□□□□□ -0.21
UBE3C-201ENST00000348165 SDIM1Q6ZPB5 146 aa13.74□□□□□ -0.21
UBE3C-201ENST00000348165 XAGE1AQ9HD64 81 aa13.73□□□□□ -0.21
UBE3C-201ENST00000348165 M0QXV9 152 aa13.73□□□□□ -0.21
UBE3C-201ENST00000348165 C4orf48Q5BLP8 95 aa13.73□□□□□ -0.21
UBE3C-201ENST00000348165 POLQO75417 2590 aa13.73□□□□□ -0.21
UBE3C-201ENST00000348165 NDUFC2-KCTD14E9PQ53 114 aa13.72□□□□□ -0.21
UBE3C-201ENST00000348165 C14orf177Q52M58 125 aa13.72□□□□□ -0.21
UBE3C-201ENST00000348165 DCANP1Q8TF63 244 aa13.72□□□□□ -0.21
UBE3C-201ENST00000348165 C2orf91Q6ZV80 131 aa13.72□□□□□ -0.21
UBE3C-201ENST00000348165 LRP4O75096 1905 aa13.72□□□□□ -0.21
UBE3C-201ENST00000348165 SPTSSBQ8NFR3 76 aa13.72□□□□□ -0.21
UBE3C-201ENST00000348165 KLLNB2CW77 178 aa13.71□□□□□ -0.21
UBE3C-201ENST00000348165 OXLD1Q5BKU9 147 aa13.71□□□□□ -0.21
UBE3C-201ENST00000348165 PTPRSQ13332 1948 aa13.71□□□□□ -0.22
UBE3C-201ENST00000348165 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.71□□□□□ -0.22
UBE3C-201ENST00000348165 A0A096LNI7 61 aa13.71□□□□□ -0.22
UBE3C-201ENST00000348165 TRBV27A0A0K0K1C4 114 aa13.71□□□□□ -0.22
UBE3C-201ENST00000348165 LOC100131303A0A0U1RQF7 123 aa13.71□□□□□ -0.22
UBE3C-201ENST00000348165 TMEM256-PLSCR3K7ERE1 68 aa13.71□□□□□ -0.22
UBE3C-201ENST00000348165 UPK3BQ9BT76 320 aa13.71□□□□□ -0.22
UBE3C-201ENST00000348165 H3BQ85 93 aa13.7□□□□□ -0.22
UBE3C-201ENST00000348165 PIK3CD-AS1Q5SR53 167 aa13.7□□□□□ -0.22
UBE3C-201ENST00000348165 H7C423 109 aa13.7□□□□□ -0.22
UBE3C-201ENST00000348165 EDN2P20800 178 aa13.7□□□□□ -0.22
UBE3C-201ENST00000348165 TMEM223A0PJW6 202 aa13.7□□□□□ -0.22
UBE3C-201ENST00000348165 IMUPQ9GZP8 106 aa13.69□□□□□ -0.22
UBE3C-201ENST00000348165 MAPKAPK5-AS1Q8N8E1 139 aa13.69□□□□□ -0.22
UBE3C-201ENST00000348165 A8MZ25 164 aa13.68□□□□□ -0.22
UBE3C-201ENST00000348165 U3KQK5 164 aa13.68□□□□□ -0.22
UBE3C-201ENST00000348165 LINC00526Q96FQ7 95 aa13.67□□□□□ -0.22
UBE3C-201ENST00000348165 GAS8-AS1O95177 125 aa13.67□□□□□ -0.22
UBE3C-201ENST00000348165 IGLV2-18A0A075B6J9 118 aa13.67□□□□□ -0.22
UBE3C-201ENST00000348165 MRPS12O15235 138 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms