RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 LINC00643Q86TS7 51 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 ZNF561-AS1K7EIQ3 104 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 TIMM17BO60830 172 aa10.85□□□□□ -0.67
NUP50-201ENST00000347635 Q9HAA7 133 aa10.85□□□□□ -0.67
NUP50-201ENST00000347635 HIST2H2BDQ6DRA6 164 aa10.85□□□□□ -0.67
NUP50-201ENST00000347635 MRAPQ8TCY5 172 aa10.85□□□□□ -0.67
NUP50-201ENST00000347635 DSCAML1Q8TD84 2053 aa10.85□□□□□ -0.67
NUP50-201ENST00000347635 GYPEP15421 78 aa10.85□□□□□ -0.67
NUP50-201ENST00000347635 LECT2O14960 151 aa10.85□□□□□ -0.67
NUP50-201ENST00000347635 HAMPP81172 84 aa10.85□□□□□ -0.67
NUP50-201ENST00000347635 DSCR8Q96T75 97 aa10.85□□□□□ -0.67
NUP50-201ENST00000347635 UBE2D4Q9Y2X8 147 aa10.84□□□□□ -0.67
NUP50-201ENST00000347635 IGKV3D-7A0A0C4DH55 119 aa10.84□□□□□ -0.67
NUP50-201ENST00000347635 CEP295Q9C0D2 2601 aa10.84□□□□□ -0.67
NUP50-201ENST00000347635 EDN2P20800 178 aa10.84□□□□□ -0.67
NUP50-201ENST00000347635 Q6ZTI0 123 aa10.84□□□□□ -0.67
NUP50-201ENST00000347635 IL17DQ8TAD2 202 aa10.84□□□□□ -0.67
NUP50-201ENST00000347635 ARHGAP32A7KAX9 2087 aa10.83□□□□□ -0.67
NUP50-201ENST00000347635 AVPP01185 164 aa10.83□□□□□ -0.68
NUP50-201ENST00000347635 MRPS36P82909 103 aaKnown RBP10.83□□□□□ -0.68
NUP50-201ENST00000347635 ANKRD11Q6UB99 2663 aaPredicted RBP10.83□□□□□ -0.68
NUP50-201ENST00000347635 LST1O00453 97 aa10.82□□□□□ -0.68
NUP50-201ENST00000347635 PKIGQ9Y2B9 76 aa10.82□□□□□ -0.68
NUP50-201ENST00000347635 A0A1B0GX51 115 aa10.81□□□□□ -0.68
NUP50-201ENST00000347635 CCL18P55774 89 aa10.81□□□□□ -0.68
NUP50-201ENST00000347635 RBMY1FQ15415 496 aaKnown RBP10.81□□□□□ -0.68
NUP50-201ENST00000347635 DEFB135Q30KP9 77 aa10.8□□□□□ -0.68
NUP50-201ENST00000347635 H7C423 109 aa10.8□□□□□ -0.68
NUP50-201ENST00000347635 C14orf132Q9NPU4 83 aa10.8□□□□□ -0.68
NUP50-201ENST00000347635 CCDC168Q8NDH2 2452 aa10.79□□□□□ -0.68
NUP50-201ENST00000347635 PTPRBP23467 1997 aa10.79□□□□□ -0.68
NUP50-201ENST00000347635 PIK3CD-AS1Q5SR53 167 aa10.78□□□□□ -0.68
NUP50-201ENST00000347635 IGLV10-54A0A075B6I4 117 aa10.78□□□□□ -0.68
NUP50-201ENST00000347635 JMJD7-PLA2G4BH0Y9G9 81 aa10.78□□□□□ -0.68
NUP50-201ENST00000347635 C16orf95Q9H693 158 aa10.78□□□□□ -0.68
NUP50-201ENST00000347635 LYRM9A8MSI8 78 aa10.78□□□□□ -0.68
NUP50-201ENST00000347635 KLK5Q9Y337 293 aaPredicted RBP10.77□□□□□ -0.68
NUP50-201ENST00000347635 PRO0255Q9UI72 69 aa10.77□□□□□ -0.69
NUP50-201ENST00000347635 PRM2P04554 102 aa10.77□□□□□ -0.69
NUP50-201ENST00000347635 CITED1Q99966 193 aa10.77□□□□□ -0.69
NUP50-201ENST00000347635 POM121L12Q8N7R1 296 aa10.76□□□□□ -0.69
NUP50-201ENST00000347635 CXCL5P42830 114 aa10.76□□□□□ -0.69
NUP50-201ENST00000347635 NCR3O14931 201 aa10.75□□□□□ -0.69
NUP50-201ENST00000347635 KIF25-AS1Q9Y6Z4 181 aa10.75□□□□□ -0.69
NUP50-201ENST00000347635 BRCA2P51587 3418 aa10.75□□□□□ -0.69
NUP50-201ENST00000347635 CHD9Q3L8U1 2897 aa10.75□□□□□ -0.69
NUP50-201ENST00000347635 PRRC2AP48634 2157 aaKnown RBP10.75□□□□□ -0.69
NUP50-201ENST00000347635 J3KT08 172 aa10.74□□□□□ -0.69
NUP50-201ENST00000347635 C1orf43Q9BWL3 253 aa10.74□□□□□ -0.69
NUP50-201ENST00000347635 TMEM256-PLSCR3K7ERE1 68 aa10.73□□□□□ -0.69
NUP50-201ENST00000347635 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.73□□□□□ -0.69
NUP50-201ENST00000347635 AMELXQ99217 191 aa10.73□□□□□ -0.69
NUP50-201ENST00000347635 MIFP14174 115 aa10.73□□□□□ -0.69
NUP50-201ENST00000347635 Q6Q795 121 aa10.73□□□□□ -0.69
NUP50-201ENST00000347635 SPTBN4Q9H254 2564 aa10.73□□□□□ -0.69
NUP50-201ENST00000347635 C18orf65Q6ZTR6 163 aa10.73□□□□□ -0.69
NUP50-201ENST00000347635 CCDC179H3BU77 68 aa10.73□□□□□ -0.69
NUP50-201ENST00000347635 UQCRQO14949 82 aa10.73□□□□□ -0.69
NUP50-201ENST00000347635 NKAPP1Q8N9T2 125 aa10.73□□□□□ -0.69
NUP50-201ENST00000347635 CHCHD7Q9BUK0 85 aa10.73□□□□□ -0.69
NUP50-201ENST00000347635 IBA57-AS1B1ANH7 110 aa10.72□□□□□ -0.69
NUP50-201ENST00000347635 FAM222AQ5U5X8 452 aa10.72□□□□□ -0.69
NUP50-201ENST00000347635 KIR2DL5BQ8NHK3 375 aa10.72□□□□□ -0.69
NUP50-201ENST00000347635 IMUPQ9GZP8 106 aa10.72□□□□□ -0.69
NUP50-201ENST00000347635 ADAMTSL4-AS1Q5T5F5 129 aa10.71□□□□□ -0.69
NUP50-201ENST00000347635 CDIP1Q9H305 208 aa10.71□□□□□ -0.69
NUP50-201ENST00000347635 FAM19A4Q96LR4 140 aa10.71□□□□□ -0.69
NUP50-201ENST00000347635 CLUHP3Q96NS8 147 aa10.71□□□□□ -0.69
NUP50-201ENST00000347635 SDIM1Q6ZPB5 146 aa10.71□□□□□ -0.69
NUP50-201ENST00000347635 HIVEP3Q5T1R4 2406 aa10.71□□□□□ -0.7
NUP50-201ENST00000347635 PRO0461Q9UI25 63 aa10.71□□□□□ -0.7
NUP50-201ENST00000347635 IGKV2D-24A0A075B6R9 120 aa10.71□□□□□ -0.7
NUP50-201ENST00000347635 FAM240AA0A1B0GVK7 77 aa10.71□□□□□ -0.7
NUP50-201ENST00000347635 TRBV6-4A0A1B0GX49 114 aa10.71□□□□□ -0.7
NUP50-201ENST00000347635 C3orf22Q8N5N4 141 aa10.71□□□□□ -0.7
NUP50-201ENST00000347635 M0QXV9 152 aa10.7□□□□□ -0.7
NUP50-201ENST00000347635 C11orf45Q8TAV5 145 aa10.7□□□□□ -0.7
NUP50-201ENST00000347635 ESM1Q9NQ30 184 aa10.7□□□□□ -0.7
NUP50-201ENST00000347635 TRBV6-8A0A0A6YYG3 113 aa10.69□□□□□ -0.7
NUP50-201ENST00000347635 LINC00315P59091 139 aa10.69□□□□□ -0.7
NUP50-201ENST00000347635 F8WEM9 126 aa10.69□□□□□ -0.7
NUP50-201ENST00000347635 H3BQ85 93 aa10.69□□□□□ -0.7
NUP50-201ENST00000347635 hADV29S1A0JD25 119 aa10.69□□□□□ -0.7
NUP50-201ENST00000347635 LINC00242Q5T6M2 205 aa10.69□□□□□ -0.7
NUP50-201ENST00000347635 NACAE9PAV3 2078 aa10.68□□□□□ -0.7
NUP50-201ENST00000347635 SMCPP49901 116 aaPredicted RBP10.68□□□□□ -0.7
NUP50-201ENST00000347635 RBM3P98179 157 aaKnown RBP10.68□□□□□ -0.7
NUP50-201ENST00000347635 A0A0C4DFX4 3053 aa10.67□□□□□ -0.7
NUP50-201ENST00000347635 SLPIP03973 132 aa10.67□□□□□ -0.7
NUP50-201ENST00000347635 SPAG11BQ08648 103 aa10.67□□□□□ -0.7
NUP50-201ENST00000347635 SMR3AQ99954 134 aa10.67□□□□□ -0.7
NUP50-201ENST00000347635 CDC42SE2Q9NRR3 84 aa10.67□□□□□ -0.7
NUP50-201ENST00000347635 COX6A2Q02221 97 aa10.66□□□□□ -0.7
NUP50-201ENST00000347635 CAMK2N2Q96S95 79 aa10.66□□□□□ -0.7
NUP50-201ENST00000347635 SMIM1B2RUZ4 78 aa10.65□□□□□ -0.7
NUP50-201ENST00000347635 LINC00269Q8N2A0 174 aa10.65□□□□□ -0.71
NUP50-201ENST00000347635 SONP18583 2426 aaKnown RBP10.65□□□□□ -0.71
NUP50-201ENST00000347635 DEFB4AO15263 64 aa10.64□□□□□ -0.71
NUP50-201ENST00000347635 LOC100131303A0A0U1RQF7 123 aa10.64□□□□□ -0.71
NUP50-201ENST00000347635 SMIM11BQ8TCY0 68 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms