RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CFAP126Q5VTH2 177 aa6.65□□□□□ -1.35
ATG4A-202ENST00000345734 A8MWV9 139 aa6.64□□□□□ -1.35
ATG4A-202ENST00000345734 VCYO14598 125 aa6.64□□□□□ -1.35
ATG4A-202ENST00000345734 TOMM6Q96B49 74 aa6.64□□□□□ -1.35
ATG4A-202ENST00000345734 PRO0461Q9UI25 63 aa6.64□□□□□ -1.35
ATG4A-202ENST00000345734 ATP5LO75964 103 aa6.64□□□□□ -1.35
ATG4A-202ENST00000345734 C2orf66Q6UXQ4 117 aa6.64□□□□□ -1.35
ATG4A-202ENST00000345734 OR13C6PQ8NH95 151 aa6.64□□□□□ -1.35
ATG4A-202ENST00000345734 RAB37Q96AX2 223 aa6.64□□□□□ -1.35
ATG4A-202ENST00000345734 HIGD1BQ9P298 99 aa6.64□□□□□ -1.35
ATG4A-202ENST00000345734 Q9UF83 564 aa6.64□□□□□ -1.35
ATG4A-202ENST00000345734 STAB1Q9NY15 2570 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 TRBV27A0A0K0K1C4 114 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 A0A1B0GX51 115 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 K7EMI3 77 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 IFITM1P13164 125 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 ANK2Q01484 3957 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 PIK3CD-AS1Q5SR53 167 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 C9orf66Q5T8R8 295 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 ZFP2Q6ZN57 461 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 CSNK1G2-AS1Q8NCQ2 148 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 SCGB3A1Q96QR1 104 aa6.63□□□□□ -1.35
ATG4A-202ENST00000345734 TRGV1A0A0A0MS02 117 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 CCDC179H3BU77 68 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 SH2D6Q7Z4S9 175 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 KIR2DL4Q99706 377 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 NAA38Q9BRA0 125 aaKnown RBP6.62□□□□□ -1.35
ATG4A-202ENST00000345734 PKD1L1Q8TDX9 2849 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 RS1O15537 224 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 INSL3P51460 131 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 RPL39P62891 51 aaKnown RBP6.62□□□□□ -1.35
ATG4A-202ENST00000345734 GAGE2BQ13066 116 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 GAGE2EQ4V326 116 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 Q6ZTI0 123 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 TMEM263Q8WUH6 116 aaKnown RBP6.62□□□□□ -1.35
ATG4A-202ENST00000345734 PPDPFLQ8WWR9 84 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 GAGE2DQ9UEU5 116 aa6.62□□□□□ -1.35
ATG4A-202ENST00000345734 A0A1B0GWB2 263 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 J3KT08 172 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 TSHBP01222 138 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 TTC32Q5I0X7 151 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 GTSCR1Q86UQ5 136 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 PHLDA1Q8WV24 401 aaPredicted RBP6.61□□□□□ -1.35
ATG4A-202ENST00000345734 EDA2RQ9HAV5 297 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 NOP10Q9NPE3 64 aaKnown RBP6.61□□□□□ -1.35
ATG4A-202ENST00000345734 TP53TG1Q9Y2A0 90 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 DNAH3Q8TD57 4116 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 PLAC8L1A1L4L8 177 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 H7C1H1 209 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 KRTAP24-1Q3LI83 254 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 SPANXDQ9BXN6 97 aa6.61□□□□□ -1.35
ATG4A-202ENST00000345734 MRPL35Q9NZE8 188 aaKnown RBP6.61□□□□□ -1.35
ATG4A-202ENST00000345734 I3L3M4 83 aa6.6□□□□□ -1.35
ATG4A-202ENST00000345734 NEXN-AS1Q8NBZ9 246 aa6.6□□□□□ -1.35
ATG4A-202ENST00000345734 BAALCQ8WXS3 180 aa6.6□□□□□ -1.35
ATG4A-202ENST00000345734 MAST4O15021 2626 aa6.6□□□□□ -1.35
ATG4A-202ENST00000345734 DPM2O94777 84 aa6.59□□□□□ -1.35
ATG4A-202ENST00000345734 IGHV3-53P01767 116 aa6.59□□□□□ -1.35
ATG4A-202ENST00000345734 IGKCP01834 107 aa6.59□□□□□ -1.35
ATG4A-202ENST00000345734 RPS28P62857 69 aaKnown RBP6.59□□□□□ -1.35
ATG4A-202ENST00000345734 ZC2HC1BQ5TFG8 222 aa6.59□□□□□ -1.35
ATG4A-202ENST00000345734 C16orf74Q96GX8 76 aa6.59□□□□□ -1.35
ATG4A-202ENST00000345734 HHLA3Q9XRX5 114 aa6.59□□□□□ -1.35
ATG4A-202ENST00000345734 IGIPA6NJ69 53 aa6.59□□□□□ -1.35
ATG4A-202ENST00000345734 PRYO14603 147 aa6.59□□□□□ -1.35
ATG4A-202ENST00000345734 MEIG1Q5JSS6 88 aa6.59□□□□□ -1.35
ATG4A-202ENST00000345734 KRTAP3-1Q9BYR8 98 aa6.59□□□□□ -1.35
ATG4A-202ENST00000345734 TRAV12-1A0A0B4J245 112 aa6.58□□□□□ -1.36
ATG4A-202ENST00000345734 IGLL5B9A064 214 aa6.58□□□□□ -1.36
ATG4A-202ENST00000345734 F5H768 121 aa6.58□□□□□ -1.36
ATG4A-202ENST00000345734 SNCGO76070 127 aa6.58□□□□□ -1.36
ATG4A-202ENST00000345734 DAZ2Q13117 558 aaKnown RBP6.58□□□□□ -1.36
ATG4A-202ENST00000345734 RHOHQ15669 191 aa6.58□□□□□ -1.36
ATG4A-202ENST00000345734 TAL2Q16559 108 aa6.58□□□□□ -1.36
ATG4A-202ENST00000345734 RRN3P1Q2M238 152 aa6.58□□□□□ -1.36
ATG4A-202ENST00000345734 WFDC9Q8NEX5 89 aa6.58□□□□□ -1.36
ATG4A-202ENST00000345734 IGHV3-38A0A0C4DH36 116 aa6.58□□□□□ -1.36
ATG4A-202ENST00000345734 IGKV2D-26A0A0A0MRZ7 120 aa6.57□□□□□ -1.36
ATG4A-202ENST00000345734 F8VRH5 84 aa6.57□□□□□ -1.36
ATG4A-202ENST00000345734 NMUP48645 174 aa6.57□□□□□ -1.36
ATG4A-202ENST00000345734 EMP1P54849 157 aa6.57□□□□□ -1.36
ATG4A-202ENST00000345734 TEN1Q86WV5 123 aa6.57□□□□□ -1.36
ATG4A-202ENST00000345734 PCP2Q8IVA1 136 aa6.57□□□□□ -1.36
ATG4A-202ENST00000345734 C20orf203Q8NBC4 194 aa6.57□□□□□ -1.36
ATG4A-202ENST00000345734 OPRPNQ99935 248 aaPredicted RBP6.57□□□□□ -1.36
ATG4A-202ENST00000345734 TRAV4A0A0B4J268 109 aa6.56□□□□□ -1.36
ATG4A-202ENST00000345734 LYRM7Q5U5X0 104 aa6.56□□□□□ -1.36
ATG4A-202ENST00000345734 ZNRF2Q8NHG8 242 aa6.56□□□□□ -1.36
ATG4A-202ENST00000345734 KIR2DL5BQ8NHK3 375 aa6.56□□□□□ -1.36
ATG4A-202ENST00000345734 TIMM17AQ99595 171 aa6.56□□□□□ -1.36
ATG4A-202ENST00000345734 OVOL2Q9BRP0 275 aa6.56□□□□□ -1.36
ATG4A-202ENST00000345734 COL6A5A8TX70 2615 aa6.56□□□□□ -1.36
ATG4A-202ENST00000345734 TMEM141Q96I45 108 aa6.56□□□□□ -1.36
ATG4A-202ENST00000345734 TRGV2A0A075B6R0 118 aa6.55□□□□□ -1.36
ATG4A-202ENST00000345734 PLNP26678 52 aa6.55□□□□□ -1.36
ATG4A-202ENST00000345734 MRPL23Q16540 153 aaKnown RBP6.55□□□□□ -1.36
ATG4A-202ENST00000345734 PRIMA1Q86XR5 153 aa6.55□□□□□ -1.36
ATG4A-202ENST00000345734 TTTY13Q9BZ97 58 aa6.55□□□□□ -1.36
ATG4A-202ENST00000345734 LINC01549A6NIU2 74 aa6.55□□□□□ -1.36
ATG4A-202ENST00000345734 K7EQD1 137 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms