RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 CRYBA4P53673 196 aa9.44□□□□□ -0.9
HERPUD1-202ENST00000344114 TCTAP57738 103 aa9.44□□□□□ -0.9
HERPUD1-202ENST00000344114 GAGE1Q13065 139 aa9.44□□□□□ -0.9
HERPUD1-202ENST00000344114 GAGE4Q13068 117 aa9.44□□□□□ -0.9
HERPUD1-202ENST00000344114 GAGE5Q13069 117 aa9.44□□□□□ -0.9
HERPUD1-202ENST00000344114 GAGE13Q4V321 117 aa9.44□□□□□ -0.9
HERPUD1-202ENST00000344114 MRPL52Q86TS9 123 aaKnown RBP9.44□□□□□ -0.9
HERPUD1-202ENST00000344114 SPANXA1Q9NS26 97 aa9.44□□□□□ -0.9
HERPUD1-202ENST00000344114 IGHV3-38A0A0C4DH36 116 aa9.43□□□□□ -0.9
HERPUD1-202ENST00000344114 PRSS29PA6NIE9 313 aa9.43□□□□□ -0.9
HERPUD1-202ENST00000344114 LINC00694P0DN24 101 aa9.43□□□□□ -0.9
HERPUD1-202ENST00000344114 SMAGPQ0VAQ4 97 aa9.43□□□□□ -0.9
HERPUD1-202ENST00000344114 ANKRD39Q53RE8 183 aa9.43□□□□□ -0.9
HERPUD1-202ENST00000344114 SLC25A34Q6PIV7 304 aa9.43□□□□□ -0.9
HERPUD1-202ENST00000344114 C14orf144Q96I85 54 aa9.43□□□□□ -0.9
HERPUD1-202ENST00000344114 GTSF1LQ9H1H1 148 aa9.43□□□□□ -0.9
HERPUD1-202ENST00000344114 C11orf68Q9H3H3 251 aaKnown RBP9.43□□□□□ -0.9
HERPUD1-202ENST00000344114 IGLV4-3A0A075B6K6 122 aa9.42□□□□□ -0.9
HERPUD1-202ENST00000344114 A0A1B0GVY2 172 aa9.42□□□□□ -0.9
HERPUD1-202ENST00000344114 COX8AP10176 69 aa9.42□□□□□ -0.9
HERPUD1-202ENST00000344114 HNRNPA3P51991 378 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-202ENST00000344114 NANOS2P60321 138 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-202ENST00000344114 DAD1P61803 113 aa9.42□□□□□ -0.9
HERPUD1-202ENST00000344114 LINC00336Q6ZUF6 198 aa9.42□□□□□ -0.9
HERPUD1-202ENST00000344114 TIMM21Q9BVV7 248 aa9.42□□□□□ -0.9
HERPUD1-202ENST00000344114 SPART-AS1P0CW21 52 aa9.41□□□□□ -0.9
HERPUD1-202ENST00000344114 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
HERPUD1-202ENST00000344114 ZC2HC1BQ5TFG8 222 aa9.41□□□□□ -0.9
HERPUD1-202ENST00000344114 STPG4Q8N801 248 aa9.41□□□□□ -0.9
HERPUD1-202ENST00000344114 C11orf45Q8TAV5 145 aa9.41□□□□□ -0.9
HERPUD1-202ENST00000344114 CST9LQ9H4G1 147 aa9.41□□□□□ -0.9
HERPUD1-202ENST00000344114 PRO0255Q9UI72 69 aa9.41□□□□□ -0.9
HERPUD1-202ENST00000344114 APLNQ9ULZ1 77 aa9.41□□□□□ -0.9
HERPUD1-202ENST00000344114 HHLA3Q9XRX5 114 aa9.41□□□□□ -0.9
HERPUD1-202ENST00000344114 UBE2D4Q9Y2X8 147 aa9.41□□□□□ -0.9
HERPUD1-202ENST00000344114 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.9
HERPUD1-202ENST00000344114 PKHD1P08F94 4074 aa9.4□□□□□ -0.9
HERPUD1-202ENST00000344114 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
HERPUD1-202ENST00000344114 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
HERPUD1-202ENST00000344114 ABCA13Q86UQ4 5058 aa9.4□□□□□ -0.91
HERPUD1-202ENST00000344114 IGLV4-69A0A075B6H9 119 aa9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 LOC100131303A0A0U1RQF7 123 aa9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 DEFB4AO15263 64 aa9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 AMELXQ99217 191 aa9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 VCX2Q9H322 139 aa9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 CELA1Q9UNI1 258 aa9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 MRPS16Q9Y3D3 137 aaKnown RBP9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 DNAH2Q9P225 4427 aa9.39□□□□□ -0.91
HERPUD1-202ENST00000344114 DNAH17Q9UFH2 4485 aa9.38□□□□□ -0.91
HERPUD1-202ENST00000344114 TRBV25-1A0A075B6N4 114 aa9.38□□□□□ -0.91
HERPUD1-202ENST00000344114 H7C423 109 aa9.38□□□□□ -0.91
HERPUD1-202ENST00000344114 DLEU1O43261 78 aa9.38□□□□□ -0.91
HERPUD1-202ENST00000344114 ATP5G1P05496 136 aa9.38□□□□□ -0.91
HERPUD1-202ENST00000344114 NTM-AS1Q6ZSK4 140 aa9.38□□□□□ -0.91
HERPUD1-202ENST00000344114 NFE4Q86UQ8 179 aa9.38□□□□□ -0.91
HERPUD1-202ENST00000344114 OPRPNQ99935 248 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 TMEM243Q9BU79 118 aa9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 CSDC2Q9Y534 153 aaKnown RBP9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 C11orf86A6NJI1 115 aa9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 PAX4O43316 350 aa9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 FGF6P10767 208 aa9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 GYPEP15421 78 aa9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 NMUP48645 174 aa9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 HERVK_113P61574 105 aa9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 BOD1L2Q8IYS8 172 aa9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 C2orf88Q9BSF0 95 aa9.37□□□□□ -0.91
HERPUD1-202ENST00000344114 IGLL5B9A064 214 aa9.36□□□□□ -0.91
HERPUD1-202ENST00000344114 M0R143 59 aa9.36□□□□□ -0.91
HERPUD1-202ENST00000344114 UBE2L6O14933 153 aa9.36□□□□□ -0.91
HERPUD1-202ENST00000344114 CTAG1AP78358 180 aa9.36□□□□□ -0.91
HERPUD1-202ENST00000344114 LBHQ53QV2 105 aaPredicted RBP9.36□□□□□ -0.91
HERPUD1-202ENST00000344114 DGAT2L7PQ6IED9 249 aa9.36□□□□□ -0.91
HERPUD1-202ENST00000344114 Q6ZUT4 128 aa9.36□□□□□ -0.91
HERPUD1-202ENST00000344114 ATP6V0E2Q8NHE4 81 aa9.36□□□□□ -0.91
HERPUD1-202ENST00000344114 FAM104AQ969W3 186 aa9.36□□□□□ -0.91
HERPUD1-202ENST00000344114 CHAC1Q9BUX1 264 aa9.36□□□□□ -0.91
HERPUD1-202ENST00000344114 IGKV2D-26A0A0A0MRZ7 120 aa9.35□□□□□ -0.91
HERPUD1-202ENST00000344114 TRBV6-8A0A0A6YYG3 113 aa9.35□□□□□ -0.91
HERPUD1-202ENST00000344114 E9PLD3 99 aa9.35□□□□□ -0.91
HERPUD1-202ENST00000344114 SIVA1O15304 175 aa9.35□□□□□ -0.91
HERPUD1-202ENST00000344114 ZNF25P17030 456 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-202ENST00000344114 AMMECR1LQ6DCA0 310 aa9.34□□□□□ -0.91
HERPUD1-202ENST00000344114 DYNC1H1Q14204 4646 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-202ENST00000344114 DNAH11Q96DT5 4516 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 TRAV26-1A0A087WT03 109 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 EREGO14944 169 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 TMEM170BQ5T4T1 132 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 PCP2Q8IVA1 136 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 TMEM101Q96IK0 257 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 SNHG12Q9BXW3 62 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 KRTAP4-5Q9BYR2 181 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 TP73-AS1Q9UF72 201 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 PKD1P98161 4303 aa9.33□□□□□ -0.92
HERPUD1-202ENST00000344114 TINCRA0A1B0GVN0 87 aa9.32□□□□□ -0.92
HERPUD1-202ENST00000344114 F5H768 121 aa9.32□□□□□ -0.92
HERPUD1-202ENST00000344114 RTL8CO15255 209 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms