RNA–Protein interactions for RNA: ENST00000343638.9

UBTF-202, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 4,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-202ENST00000343638 C1orf43Q9BWL3 253 aa13.81□□□□□ -0.2
UBTF-202ENST00000343638 COX7B2Q8TF08 81 aa13.81□□□□□ -0.2
UBTF-202ENST00000343638 IGKV2D-26A0A0A0MRZ7 120 aa13.8□□□□□ -0.2
UBTF-202ENST00000343638 TRAV13-2A0A0B4J235 113 aa13.8□□□□□ -0.2
UBTF-202ENST00000343638 TINCRA0A1B0GVN0 87 aa13.8□□□□□ -0.2
UBTF-202ENST00000343638 IGLL5B9A064 214 aa13.8□□□□□ -0.2
UBTF-202ENST00000343638 RMI2Q96E14 147 aa13.8□□□□□ -0.2
UBTF-202ENST00000343638 K7EP13 123 aa13.8□□□□□ -0.2
UBTF-202ENST00000343638 Q9HAA7 133 aa13.79□□□□□ -0.2
UBTF-202ENST00000343638 TAX1BP3O14907 124 aa13.79□□□□□ -0.2
UBTF-202ENST00000343638 PYGO1Q9Y3Y4 419 aa13.79□□□□□ -0.2
UBTF-202ENST00000343638 HELZ2Q9BYK8 2649 aaKnown RBP13.78□□□□□ -0.2
UBTF-202ENST00000343638 F8W1H4 67 aa13.78□□□□□ -0.2
UBTF-202ENST00000343638 KIR2DL5BQ8NHK3 375 aa13.78□□□□□ -0.2
UBTF-202ENST00000343638 KLK12Q9UKR0 248 aa13.78□□□□□ -0.2
UBTF-202ENST00000343638 CELSR3Q9NYQ7 3312 aa13.78□□□□□ -0.2
UBTF-202ENST00000343638 ZNF22P17026 224 aaPredicted RBP13.78□□□□□ -0.2
UBTF-202ENST00000343638 CCL18P55774 89 aa13.78□□□□□ -0.2
UBTF-202ENST00000343638 CDKN2A-AS1Q9UH64 79 aa13.78□□□□□ -0.2
UBTF-202ENST00000343638 CCL25O15444 150 aa13.78□□□□□ -0.2
UBTF-202ENST00000343638 TTC32Q5I0X7 151 aa13.78□□□□□ -0.2
UBTF-202ENST00000343638 PCP4P48539 62 aa13.77□□□□□ -0.2
UBTF-202ENST00000343638 C1orf158Q8N1D5 194 aa13.77□□□□□ -0.21
UBTF-202ENST00000343638 FLNAP21333 2647 aaKnown RBP13.77□□□□□ -0.21
UBTF-202ENST00000343638 DAND5Q8N907 189 aa13.77□□□□□ -0.21
UBTF-202ENST00000343638 TRAV8-4A0A0B4J246 113 aa13.76□□□□□ -0.21
UBTF-202ENST00000343638 USP24Q9UPU5 2620 aa13.76□□□□□ -0.21
UBTF-202ENST00000343638 GTSF1LQ9H1H1 148 aa13.76□□□□□ -0.21
UBTF-202ENST00000343638 TRBV6-8A0A0A6YYG3 113 aa13.76□□□□□ -0.21
UBTF-202ENST00000343638 OCIAD2Q56VL3 154 aa13.76□□□□□ -0.21
UBTF-202ENST00000343638 Q8N976 141 aa13.76□□□□□ -0.21
UBTF-202ENST00000343638 SCGB1A1P11684 91 aa13.75□□□□□ -0.21
UBTF-202ENST00000343638 C10orf126Q8N4M7 172 aa13.75□□□□□ -0.21
UBTF-202ENST00000343638 IGHV4-28A0A0C4DH34 117 aa13.74□□□□□ -0.21
UBTF-202ENST00000343638 C11orf45Q8TAV5 145 aa13.74□□□□□ -0.21
UBTF-202ENST00000343638 OXLD1Q5BKU9 147 aa13.74□□□□□ -0.21
UBTF-202ENST00000343638 ITPR3Q14573 2671 aa13.73□□□□□ -0.21
UBTF-202ENST00000343638 H7C423 109 aa13.73□□□□□ -0.21
UBTF-202ENST00000343638 MAPKAPK5-AS1Q8N8E1 139 aa13.73□□□□□ -0.21
UBTF-202ENST00000343638 TSPAN13O95857 204 aa13.73□□□□□ -0.21
UBTF-202ENST00000343638 SND1-IT1Q9HBX3 110 aa13.73□□□□□ -0.21
UBTF-202ENST00000343638 A0A096LNT2 108 aa13.73□□□□□ -0.21
UBTF-202ENST00000343638 SIGMAR1Q99720 223 aa13.72□□□□□ -0.21
UBTF-202ENST00000343638 TMEM223A0PJW6 202 aa13.72□□□□□ -0.21
UBTF-202ENST00000343638 FAM110AQ9BQ89 295 aa13.72□□□□□ -0.21
UBTF-202ENST00000343638 SPTBN5Q9NRC6 3674 aaKnown RBP13.72□□□□□ -0.21
UBTF-202ENST00000343638 A0A096LNJ9 63 aa13.71□□□□□ -0.21
UBTF-202ENST00000343638 EDA2RQ9HAV5 297 aa13.71□□□□□ -0.22
UBTF-202ENST00000343638 LAMTOR3Q9UHA4 124 aa13.71□□□□□ -0.22
UBTF-202ENST00000343638 LOC100131303A0A0U1RQF7 123 aa13.7□□□□□ -0.22
UBTF-202ENST00000343638 IGIPA6NJ69 53 aa13.7□□□□□ -0.22
UBTF-202ENST00000343638 A0A0J9YXY3 114 aa13.7□□□□□ -0.22
UBTF-202ENST00000343638 LINC00269Q8N2A0 174 aa13.7□□□□□ -0.22
UBTF-202ENST00000343638 CAMK2N2Q96S95 79 aa13.7□□□□□ -0.22
UBTF-202ENST00000343638 A0A1B0GV72 72 aa13.7□□□□□ -0.22
UBTF-202ENST00000343638 NKAPP1Q8N9T2 125 aa13.69□□□□□ -0.22
UBTF-202ENST00000343638 IGHV4-30-4P0DP06 118 aa13.69□□□□□ -0.22
UBTF-202ENST00000343638 TIRAPP58753 221 aa13.69□□□□□ -0.22
UBTF-202ENST00000343638 FRYLO94915 3013 aa13.69□□□□□ -0.22
UBTF-202ENST00000343638 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
UBTF-202ENST00000343638 UBE2D4Q9Y2X8 147 aa13.68□□□□□ -0.22
UBTF-202ENST00000343638 FAM19A4Q96LR4 140 aa13.68□□□□□ -0.22
UBTF-202ENST00000343638 IGLV2-18A0A075B6J9 118 aa13.68□□□□□ -0.22
UBTF-202ENST00000343638 RNASE8Q8TDE3 154 aaKnown RBP13.68□□□□□ -0.22
UBTF-202ENST00000343638 TM2D2Q9BX73 214 aa13.68□□□□□ -0.22
UBTF-202ENST00000343638 PPDPFLQ8WWR9 84 aa13.67□□□□□ -0.22
UBTF-202ENST00000343638 SPAG11BQ08648 103 aa13.67□□□□□ -0.22
UBTF-202ENST00000343638 MIR7-3HGQ8N6C7 128 aa13.67□□□□□ -0.22
UBTF-202ENST00000343638 UBE2D3P61077 147 aa13.67□□□□□ -0.22
UBTF-202ENST00000343638 UBE2D2P62837 147 aa13.67□□□□□ -0.22
UBTF-202ENST00000343638 REG3AQ06141 175 aa13.67□□□□□ -0.22
UBTF-202ENST00000343638 MAP1AP78559 2803 aaPredicted RBP13.67□□□□□ -0.22
UBTF-202ENST00000343638 CXCL5P42830 114 aa13.66□□□□□ -0.22
UBTF-202ENST00000343638 FHL3Q13643 280 aa13.66□□□□□ -0.22
UBTF-202ENST00000343638 DEFB131BA0A096LNP1 70 aa13.66□□□□□ -0.22
UBTF-202ENST00000343638 CLUHP3Q96NS8 147 aa13.66□□□□□ -0.22
UBTF-202ENST00000343638 BEAN1Q3B7T3 259 aa13.66□□□□□ -0.22
UBTF-202ENST00000343638 CARD19Q96LW7 228 aa13.65□□□□□ -0.22
UBTF-202ENST00000343638 C2orf91Q6ZV80 131 aa13.65□□□□□ -0.22
UBTF-202ENST00000343638 KIF25-AS1Q9Y6Z4 181 aa13.65□□□□□ -0.22
UBTF-202ENST00000343638 RBX1P62877 108 aa13.65□□□□□ -0.22
UBTF-202ENST00000343638 MIAQ16674 131 aa13.64□□□□□ -0.23
UBTF-202ENST00000343638 SPATA25Q9BR10 227 aa13.64□□□□□ -0.23
UBTF-202ENST00000343638 MRPS36P82909 103 aaKnown RBP13.64□□□□□ -0.23
UBTF-202ENST00000343638 NDUFA1O15239 70 aa13.63□□□□□ -0.23
UBTF-202ENST00000343638 IGSF10Q6WRI0 2623 aa13.63□□□□□ -0.23
UBTF-202ENST00000343638 GAGE12HA6NDE8 117 aa13.63□□□□□ -0.23
UBTF-202ENST00000343638 CHCHD10Q8WYQ3 142 aaPredicted RBP13.62□□□□□ -0.23
UBTF-202ENST00000343638 INAFM2P0DMQ5 153 aa13.62□□□□□ -0.23
UBTF-202ENST00000343638 RBMY1FQ15415 496 aaKnown RBP13.62□□□□□ -0.23
UBTF-202ENST00000343638 PTH2Q96A98 100 aa13.6□□□□□ -0.23
UBTF-202ENST00000343638 NTN5Q8WTR8 489 aaPredicted RBP13.6□□□□□ -0.23
UBTF-202ENST00000343638 SPEGQ15772 3267 aa13.6□□□□□ -0.23
UBTF-202ENST00000343638 SPANXB1Q9NS25 103 aaPredicted RBP13.6□□□□□ -0.23
UBTF-202ENST00000343638 A8MZ25 164 aa13.59□□□□□ -0.23
UBTF-202ENST00000343638 Q6ZSN1 163 aa13.59□□□□□ -0.23
UBTF-202ENST00000343638 GAGE2AQ6NT46 116 aa13.59□□□□□ -0.23
UBTF-202ENST00000343638 GAGE2EQ4V326 116 aa13.58□□□□□ -0.24
UBTF-202ENST00000343638 GAGE2DQ9UEU5 116 aa13.58□□□□□ -0.24
UBTF-202ENST00000343638 UBE2D1P51668 147 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms