RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FLNAP21333 2647 aaKnown RBP4.72□□□□□ -1.65
VCAN-203ENST00000343200 CRYGAP11844 174 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 RNF185Q96GF1 192 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 C17orf58Q2M2W7 97 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 IGHV4-30-2A0A087WSY4 118 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 C19orf71A6NCJ1 209 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 INSL3P51460 131 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 CD164Q04900 197 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 LINC00269Q8N2A0 174 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 COL4A4P53420 1690 aaPredicted RBP4.71□□□□□ -1.66
VCAN-203ENST00000343200 TRBV7-7A0A0K0K1E9 115 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 SPRY2O43597 315 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 ZNF883P0CG24 379 aa4.71□□□□□ -1.66
VCAN-203ENST00000343200 TEP1Q99973 2627 aaKnown RBP4.71□□□□□ -1.66
VCAN-203ENST00000343200 A0A096LPF7 62 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 HILS1P60008 231 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 E9PLN8 166 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 ITPR3Q14573 2671 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 MBD3L4A6NDZ8 208 aaPredicted RBP4.7□□□□□ -1.66
VCAN-203ENST00000343200 MBD3L3A6NE82 208 aaPredicted RBP4.7□□□□□ -1.66
VCAN-203ENST00000343200 MBD3L5A6NJ08 208 aaPredicted RBP4.7□□□□□ -1.66
VCAN-203ENST00000343200 PRM2P04554 102 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 C1orf147Q96MC9 270 aaPredicted RBP4.7□□□□□ -1.66
VCAN-203ENST00000343200 ZFAND2AQ8N6M9 145 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 KMT2BQ9UMN6 2715 aaPredicted RBP4.7□□□□□ -1.66
VCAN-203ENST00000343200 IGHV4-61A0A0C4DH41 118 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 A0A0J9YX75 114 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 EIF4EBP1Q13541 118 aaPredicted RBP4.7□□□□□ -1.66
VCAN-203ENST00000343200 ITPR1Q14643 2758 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 BRD3OSQ6XYD6 125 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 ITPR2Q14571 2701 aa4.7□□□□□ -1.66
VCAN-203ENST00000343200 TRBV10-1A0A0K0K1A3 114 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 C20orf203Q8NBC4 194 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 NSD1Q96L73 2696 aaPredicted RBP4.69□□□□□ -1.66
VCAN-203ENST00000343200 IGHV4-38-2P0DP08 117 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 TRANK1O15050 2925 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 LINC00208Q96KT6 92 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 FOXL2NBQ6ZUU3 175 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 PLA2G2AP14555 144 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 Q6ZQY7 126 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 ARTNQ5T4W7 220 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 TPSG1Q9NRR2 321 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 SLPIP03973 132 aa4.69□□□□□ -1.66
VCAN-203ENST00000343200 hDV103S1A0JD37 113 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 CHD9Q3L8U1 2897 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 LYNX1G3V0Z9 82 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 G3V318 75 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 LYNX1P0DP58 116 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 CCL24O00175 119 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 Q8N3U1 123 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 MSRB1Q9NZV6 116 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 HIGD2AQ9BW72 106 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 MUC7Q8TAX7 377 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 COL4A1P02462 1669 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 WFDC13Q8IUB5 93 aa4.68□□□□□ -1.66
VCAN-203ENST00000343200 IGHV4-30-4P0DP06 118 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 IGHV4-31P0DP07 118 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 DEFB121Q5J5C9 76 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 PYGO1Q9Y3Y4 419 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 A0A0C4DFX4 3053 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 PATE3B3GLJ2 98 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 Q6ZVQ6 151 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 MDFIQ99750 246 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 COL8A2P25067 703 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 RETNLBQ9BQ08 111 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 ZNF706Q9Y5V0 76 aaPredicted RBP4.67□□□□□ -1.66
VCAN-203ENST00000343200 ATP1A1-AS1Q5TC04 95 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 SPINT4Q6UDR6 99 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 ZNRD1Q9P1U0 126 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 LYPD2Q6UXB3 125 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 NPBQ8NG41 125 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 CCL18P55774 89 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 FHL1Q13642 323 aa4.67□□□□□ -1.66
VCAN-203ENST00000343200 Q8N9W7 124 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 A0A0G2JNJ9 132 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 Q9UFV3 132 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 IGLV3-19P01714 112 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 CSRP2Q16527 193 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.66□□□□□ -1.66
VCAN-203ENST00000343200 FLVCR1-AS1Q8TAF5 88 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 ODF3Q96PU9 254 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 SPART-AS1P0CW21 52 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 POM121L12Q8N7R1 296 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 LINC00467Q9BRT7 94 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 IGKV1-17P01599 117 aa4.66□□□□□ -1.66
VCAN-203ENST00000343200 K7EIM0 57 aa4.65□□□□□ -1.66
VCAN-203ENST00000343200 I3L2K1 104 aa4.65□□□□□ -1.66
VCAN-203ENST00000343200 CTSGP08311 255 aa4.65□□□□□ -1.66
VCAN-203ENST00000343200 C10orf25Q5T742 122 aa4.65□□□□□ -1.66
VCAN-203ENST00000343200 Q8N814 137 aa4.65□□□□□ -1.66
VCAN-203ENST00000343200 MSMBP08118 114 aa4.65□□□□□ -1.66
VCAN-203ENST00000343200 KLK5Q9Y337 293 aaPredicted RBP4.65□□□□□ -1.66
VCAN-203ENST00000343200 H0Y9P7 68 aa4.65□□□□□ -1.67
VCAN-203ENST00000343200 GDF5OSQ5U4N7 250 aa4.65□□□□□ -1.67
VCAN-203ENST00000343200 NTM-AS1Q6ZSK4 140 aa4.65□□□□□ -1.67
VCAN-203ENST00000343200 TFF2Q03403 129 aa4.65□□□□□ -1.67
VCAN-203ENST00000343200 SMIM11BQ8TCY0 68 aa4.65□□□□□ -1.67
VCAN-203ENST00000343200 CSRP1P21291 193 aaKnown RBP4.65□□□□□ -1.67
VCAN-203ENST00000343200 BEAN1Q3B7T3 259 aa4.65□□□□□ -1.67
VCAN-203ENST00000343200 KAAG1Q9UBP8 84 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms