RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 Q6ZSV7 163 aa10.93□□□□□ -0.66
RRP1B-201ENST00000340648 C3orf22Q8N5N4 141 aa10.93□□□□□ -0.66
RRP1B-201ENST00000340648 DEFB113Q30KQ7 82 aa10.93□□□□□ -0.66
RRP1B-201ENST00000340648 ZNF580Q9UK33 172 aa10.93□□□□□ -0.66
RRP1B-201ENST00000340648 hADV29S1A0JD25 119 aa10.92□□□□□ -0.66
RRP1B-201ENST00000340648 TMEM256-PLSCR3K7ERE1 68 aa10.92□□□□□ -0.66
RRP1B-201ENST00000340648 ADAMTS20P59510 1910 aa10.92□□□□□ -0.66
RRP1B-201ENST00000340648 DEFB4AO15263 64 aa10.92□□□□□ -0.66
RRP1B-201ENST00000340648 TIMM17BO60830 172 aa10.92□□□□□ -0.66
RRP1B-201ENST00000340648 MRPS36P82909 103 aaKnown RBP10.92□□□□□ -0.66
RRP1B-201ENST00000340648 MYO9AB2RTY4 2548 aa10.92□□□□□ -0.66
RRP1B-201ENST00000340648 PRRC2CQ9Y520 2896 aaKnown RBP10.91□□□□□ -0.66
RRP1B-201ENST00000340648 DEFB114Q30KQ6 69 aa10.91□□□□□ -0.66
RRP1B-201ENST00000340648 CITED2Q99967 270 aaPredicted RBP10.91□□□□□ -0.66
RRP1B-201ENST00000340648 CAMK2N2Q96S95 79 aa10.9□□□□□ -0.66
RRP1B-201ENST00000340648 SPAG11BQ08648 103 aa10.89□□□□□ -0.67
RRP1B-201ENST00000340648 AGRNO00468 2067 aa10.89□□□□□ -0.67
RRP1B-201ENST00000340648 IGLV1-40P01703 118 aa10.89□□□□□ -0.67
RRP1B-201ENST00000340648 NOTCH2Q04721 2471 aa10.88□□□□□ -0.67
RRP1B-201ENST00000340648 IGKV2D-24A0A075B6R9 120 aa10.88□□□□□ -0.67
RRP1B-201ENST00000340648 IGHV4-28A0A0C4DH34 117 aa10.88□□□□□ -0.67
RRP1B-201ENST00000340648 CXCL5P42830 114 aa10.88□□□□□ -0.67
RRP1B-201ENST00000340648 COL4A2P08572 1712 aa10.87□□□□□ -0.67
RRP1B-201ENST00000340648 CDIP1Q9H305 208 aa10.87□□□□□ -0.67
RRP1B-201ENST00000340648 ADAMTSL4-AS1Q5T5F5 129 aa10.87□□□□□ -0.67
RRP1B-201ENST00000340648 C20orf197Q8N268 126 aa10.87□□□□□ -0.67
RRP1B-201ENST00000340648 UPK3BQ9BT76 320 aa10.87□□□□□ -0.67
RRP1B-201ENST00000340648 CHD7Q9P2D1 2997 aa10.86□□□□□ -0.67
RRP1B-201ENST00000340648 NAV2Q8IVL1 2488 aa10.86□□□□□ -0.67
RRP1B-201ENST00000340648 PSCAO43653 123 aa10.86□□□□□ -0.67
RRP1B-201ENST00000340648 NDUFA7O95182 113 aa10.86□□□□□ -0.67
RRP1B-201ENST00000340648 Q6YL49 198 aa10.86□□□□□ -0.67
RRP1B-201ENST00000340648 IBA57-AS1B1ANH7 110 aa10.86□□□□□ -0.67
RRP1B-201ENST00000340648 TMEM258P61165 79 aa10.86□□□□□ -0.67
RRP1B-201ENST00000340648 C18orf65Q6ZTR6 163 aa10.86□□□□□ -0.67
RRP1B-201ENST00000340648 WFDC11Q8NEX6 87 aa10.86□□□□□ -0.67
RRP1B-201ENST00000340648 IMUPQ9GZP8 106 aa10.86□□□□□ -0.67
RRP1B-201ENST00000340648 RPL18AQ02543 176 aaKnown RBP10.85□□□□□ -0.67
RRP1B-201ENST00000340648 KLK12Q9UKR0 248 aa10.85□□□□□ -0.67
RRP1B-201ENST00000340648 DEFB135Q30KP9 77 aa10.85□□□□□ -0.67
RRP1B-201ENST00000340648 CEP295Q9C0D2 2601 aa10.85□□□□□ -0.67
RRP1B-201ENST00000340648 NCOR2Q9Y618 2525 aa10.85□□□□□ -0.67
RRP1B-201ENST00000340648 Q6Q795 121 aa10.85□□□□□ -0.67
RRP1B-201ENST00000340648 LINC00269Q8N2A0 174 aa10.85□□□□□ -0.67
RRP1B-201ENST00000340648 PRO0255Q9UI72 69 aa10.85□□□□□ -0.67
RRP1B-201ENST00000340648 LINC01546A6NGU7 62 aa10.84□□□□□ -0.67
RRP1B-201ENST00000340648 ENHOQ6UWT2 76 aa10.84□□□□□ -0.67
RRP1B-201ENST00000340648 DIRC1Q969H9 104 aa10.84□□□□□ -0.67
RRP1B-201ENST00000340648 NREPQ16612 68 aa10.84□□□□□ -0.67
RRP1B-201ENST00000340648 UBE2DNLQ8IWF7 75 aa10.83□□□□□ -0.68
RRP1B-201ENST00000340648 HTTP42858 3142 aa10.83□□□□□ -0.68
RRP1B-201ENST00000340648 C1orf43Q9BWL3 253 aa10.83□□□□□ -0.68
RRP1B-201ENST00000340648 TRBV6-8A0A0A6YYG3 113 aa10.82□□□□□ -0.68
RRP1B-201ENST00000340648 LOC100131303A0A0U1RQF7 123 aa10.82□□□□□ -0.68
RRP1B-201ENST00000340648 SPART-AS1P0CW21 52 aa10.82□□□□□ -0.68
RRP1B-201ENST00000340648 SMCPP49901 116 aaPredicted RBP10.82□□□□□ -0.68
RRP1B-201ENST00000340648 DEFB121Q5J5C9 76 aa10.82□□□□□ -0.68
RRP1B-201ENST00000340648 SMIM11BQ8TCY0 68 aa10.82□□□□□ -0.68
RRP1B-201ENST00000340648 CCDC168Q8NDH2 2452 aa10.82□□□□□ -0.68
RRP1B-201ENST00000340648 FUSP35637 526 aaKnown RBP eCLIP10.82□□□□□ -0.68
RRP1B-201ENST00000340648 DNAJC9-AS1A6NH13 148 aa10.82□□□□□ -0.68
RRP1B-201ENST00000340648 LINC00242Q5T6M2 205 aa10.82□□□□□ -0.68
RRP1B-201ENST00000340648 FAM222AQ5U5X8 452 aa10.82□□□□□ -0.68
RRP1B-201ENST00000340648 FAM240AA0A1B0GVK7 77 aa10.81□□□□□ -0.68
RRP1B-201ENST00000340648 A0A1W2PPR1 153 aa10.81□□□□□ -0.68
RRP1B-201ENST00000340648 ZNF702PQ9H963 129 aa10.81□□□□□ -0.68
RRP1B-201ENST00000340648 CHCHD7Q9BUK0 85 aa10.8□□□□□ -0.68
RRP1B-201ENST00000340648 PRO0461Q9UI25 63 aa10.8□□□□□ -0.68
RRP1B-201ENST00000340648 USP17L23D6RBM5 183 aa10.8□□□□□ -0.68
RRP1B-201ENST00000340648 AVPP01185 164 aa10.8□□□□□ -0.68
RRP1B-201ENST00000340648 CHCHD10Q8WYQ3 142 aaPredicted RBP10.8□□□□□ -0.68
RRP1B-201ENST00000340648 PTPRBP23467 1997 aa10.8□□□□□ -0.68
RRP1B-201ENST00000340648 COX7CP15954 63 aa10.79□□□□□ -0.68
RRP1B-201ENST00000340648 COX6A2Q02221 97 aa10.79□□□□□ -0.68
RRP1B-201ENST00000340648 REG3AQ06141 175 aa10.79□□□□□ -0.68
RRP1B-201ENST00000340648 IGHV4-31P0DP07 118 aa10.79□□□□□ -0.68
RRP1B-201ENST00000340648 HIVEP3Q5T1R4 2406 aa10.79□□□□□ -0.68
RRP1B-201ENST00000340648 C6orf99Q4VX62 202 aa10.79□□□□□ -0.68
RRP1B-201ENST00000340648 SCXQ7RTU7 201 aa10.79□□□□□ -0.68
RRP1B-201ENST00000340648 ETDCA0A1B0GVM5 59 aa10.79□□□□□ -0.68
RRP1B-201ENST00000340648 PRB2P02812 416 aaPredicted RBP10.79□□□□□ -0.68
RRP1B-201ENST00000340648 AMELXQ99217 191 aa10.79□□□□□ -0.68
RRP1B-201ENST00000340648 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
RRP1B-201ENST00000340648 UBE2BP63146 152 aa10.78□□□□□ -0.68
RRP1B-201ENST00000340648 C9orf66Q5T8R8 295 aa10.78□□□□□ -0.68
RRP1B-201ENST00000340648 SERP2Q8N6R1 65 aa10.78□□□□□ -0.68
RRP1B-201ENST00000340648 KIF25-AS1Q9Y6Z4 181 aa10.78□□□□□ -0.68
RRP1B-201ENST00000340648 SMIM1B2RUZ4 78 aa10.78□□□□□ -0.68
RRP1B-201ENST00000340648 H3BQ85 93 aa10.78□□□□□ -0.68
RRP1B-201ENST00000340648 CDC42SE2Q9NRR3 84 aa10.78□□□□□ -0.68
RRP1B-201ENST00000340648 CDK2AP2O75956 126 aa10.77□□□□□ -0.68
RRP1B-201ENST00000340648 COX7BP24311 80 aa10.77□□□□□ -0.68
RRP1B-201ENST00000340648 SONP18583 2426 aaKnown RBP10.77□□□□□ -0.69
RRP1B-201ENST00000340648 WFDC10AQ9H1F0 79 aa10.77□□□□□ -0.69
RRP1B-201ENST00000340648 HIVEP2P31629 2446 aa10.77□□□□□ -0.69
RRP1B-201ENST00000340648 LINC00694P0DN24 101 aa10.76□□□□□ -0.69
RRP1B-201ENST00000340648 PDE6GP18545 87 aa10.76□□□□□ -0.69
RRP1B-201ENST00000340648 CCL18P55774 89 aa10.76□□□□□ -0.69
RRP1B-201ENST00000340648 HIGD2BQ4VC39 106 aa10.76□□□□□ -0.69
RRP1B-201ENST00000340648 ATP5EP2Q5VTU8 51 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms