RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 F5H768 121 aa11.27□□□□□ -0.61
LIMK2-203ENST00000340552 F6UB75 175 aa11.27□□□□□ -0.61
LIMK2-203ENST00000340552 FAM74A4Q5TZK3 123 aa11.27□□□□□ -0.61
LIMK2-203ENST00000340552 DAND5Q8N907 189 aa11.27□□□□□ -0.61
LIMK2-203ENST00000340552 CITED2Q99967 270 aaPredicted RBP11.27□□□□□ -0.61
LIMK2-203ENST00000340552 ZANQ9Y493 2812 aa11.27□□□□□ -0.61
LIMK2-203ENST00000340552 C20orf203Q8NBC4 194 aa11.27□□□□□ -0.61
LIMK2-203ENST00000340552 DSCR8Q96T75 97 aa11.27□□□□□ -0.61
LIMK2-203ENST00000340552 J3QLI3 93 aa11.26□□□□□ -0.61
LIMK2-203ENST00000340552 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
LIMK2-203ENST00000340552 FAM19A4Q96LR4 140 aa11.26□□□□□ -0.61
LIMK2-203ENST00000340552 C22orf24Q9Y442 160 aa11.26□□□□□ -0.61
LIMK2-203ENST00000340552 RPL11P62913 178 aaKnown RBP11.25□□□□□ -0.61
LIMK2-203ENST00000340552 NBPF19A0A087WUL8 3843 aa11.25□□□□□ -0.61
LIMK2-203ENST00000340552 IGHV1-58A0A0C4DH39 117 aa11.25□□□□□ -0.61
LIMK2-203ENST00000340552 IGHG2P01859 326 aa11.25□□□□□ -0.61
LIMK2-203ENST00000340552 TIRAPP58753 221 aa11.25□□□□□ -0.61
LIMK2-203ENST00000340552 TMEM258P61165 79 aa11.25□□□□□ -0.61
LIMK2-203ENST00000340552 HRCT1Q6UXD1 115 aa11.25□□□□□ -0.61
LIMK2-203ENST00000340552 KMT2BQ9UMN6 2715 aaPredicted RBP11.25□□□□□ -0.61
LIMK2-203ENST00000340552 BLCAPP62952 87 aa11.24□□□□□ -0.61
LIMK2-203ENST00000340552 Q5XG85 94 aa11.24□□□□□ -0.61
LIMK2-203ENST00000340552 CREBBPQ92793 2442 aa11.24□□□□□ -0.61
LIMK2-203ENST00000340552 APCP25054 2843 aa11.24□□□□□ -0.61
LIMK2-203ENST00000340552 IGHV4-31P0DP07 118 aa11.24□□□□□ -0.61
LIMK2-203ENST00000340552 DEFB112Q30KQ8 113 aa11.24□□□□□ -0.61
LIMK2-203ENST00000340552 COX7A2LO14548 114 aa11.23□□□□□ -0.61
LIMK2-203ENST00000340552 FAM104AQ969W3 186 aa11.23□□□□□ -0.61
LIMK2-203ENST00000340552 TRAV13-1A0A0B4J241 112 aa11.23□□□□□ -0.61
LIMK2-203ENST00000340552 M0QY20 66 aa11.23□□□□□ -0.61
LIMK2-203ENST00000340552 RS1O15537 224 aa11.23□□□□□ -0.61
LIMK2-203ENST00000340552 APRG1Q8IVJ8 170 aa11.23□□□□□ -0.61
LIMK2-203ENST00000340552 TENM4Q6N022 2769 aa11.23□□□□□ -0.61
LIMK2-203ENST00000340552 PLA2G2AP14555 144 aa11.22□□□□□ -0.61
LIMK2-203ENST00000340552 MRPS36P82909 103 aaKnown RBP11.22□□□□□ -0.61
LIMK2-203ENST00000340552 BEAN1Q3B7T3 259 aa11.22□□□□□ -0.61
LIMK2-203ENST00000340552 Q96MF0 132 aa11.22□□□□□ -0.61
LIMK2-203ENST00000340552 UPK3BQ9BT76 320 aa11.22□□□□□ -0.61
LIMK2-203ENST00000340552 FAM223BA6NKX1 122 aa11.22□□□□□ -0.61
LIMK2-203ENST00000340552 RPL18AQ02543 176 aaKnown RBP11.22□□□□□ -0.61
LIMK2-203ENST00000340552 RNASE13Q5GAN3 156 aaKnown RBP11.22□□□□□ -0.61
LIMK2-203ENST00000340552 FAM223AQ8IWN6 122 aa11.22□□□□□ -0.61
LIMK2-203ENST00000340552 VSIG2Q96IQ7 327 aa11.22□□□□□ -0.61
LIMK2-203ENST00000340552 IGHV4-59P01825 116 aa11.22□□□□□ -0.61
LIMK2-203ENST00000340552 J3QKU1 62 aa11.21□□□□□ -0.61
LIMK2-203ENST00000340552 SOCS3O14543 225 aa11.21□□□□□ -0.61
LIMK2-203ENST00000340552 BAALC-AS2P0C853 105 aa11.21□□□□□ -0.61
LIMK2-203ENST00000340552 HIST2H2BCQ6DN03 193 aa11.21□□□□□ -0.61
LIMK2-203ENST00000340552 CD28P10747 220 aa11.2□□□□□ -0.62
LIMK2-203ENST00000340552 RNF152Q8N8N0 203 aa11.2□□□□□ -0.62
LIMK2-203ENST00000340552 Q8N2B8 174 aa11.2□□□□□ -0.62
LIMK2-203ENST00000340552 KRTAP1-3Q8IUG1 177 aa11.19□□□□□ -0.62
LIMK2-203ENST00000340552 FSHBP01225 129 aa11.18□□□□□ -0.62
LIMK2-203ENST00000340552 H3BUA1 57 aa11.18□□□□□ -0.62
LIMK2-203ENST00000340552 SERP2Q8N6R1 65 aa11.18□□□□□ -0.62
LIMK2-203ENST00000340552 TEX15Q9BXT5 2789 aa11.18□□□□□ -0.62
LIMK2-203ENST00000340552 FAM218AQ96MZ4 157 aa11.17□□□□□ -0.62
LIMK2-203ENST00000340552 IGKV3-7A0A075B6H7 116 aa11.17□□□□□ -0.62
LIMK2-203ENST00000340552 TIMM17BO60830 172 aa11.17□□□□□ -0.62
LIMK2-203ENST00000340552 IGKV3D-7A0A0C4DH55 119 aa11.16□□□□□ -0.62
LIMK2-203ENST00000340552 UNQ9165/PRO28630Q6UXU0 137 aa11.16□□□□□ -0.62
LIMK2-203ENST00000340552 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
LIMK2-203ENST00000340552 ZNF469Q96JG9 3925 aaPredicted RBP11.16□□□□□ -0.62
LIMK2-203ENST00000340552 HELZ2Q9BYK8 2649 aaKnown RBP11.16□□□□□ -0.62
LIMK2-203ENST00000340552 A0A087WVE0 104 aa11.16□□□□□ -0.62
LIMK2-203ENST00000340552 TRBV12-3P01733 135 aa11.16□□□□□ -0.62
LIMK2-203ENST00000340552 IGHV3-11P01762 117 aa11.16□□□□□ -0.62
LIMK2-203ENST00000340552 INAFM2P0DMQ5 153 aa11.16□□□□□ -0.62
LIMK2-203ENST00000340552 KLLNB2CW77 178 aa11.15□□□□□ -0.62
LIMK2-203ENST00000340552 IGLV1-40P01703 118 aa11.15□□□□□ -0.62
LIMK2-203ENST00000340552 LINC00308Q8TCZ7 52 aa11.15□□□□□ -0.62
LIMK2-203ENST00000340552 PYGO1Q9Y3Y4 419 aa11.15□□□□□ -0.62
LIMK2-203ENST00000340552 CCDC168Q8NDH2 2452 aa11.15□□□□□ -0.62
LIMK2-203ENST00000340552 CFHR3Q02985 330 aa11.14□□□□□ -0.63
LIMK2-203ENST00000340552 FAM222AQ5U5X8 452 aa11.14□□□□□ -0.63
LIMK2-203ENST00000340552 TLN2Q9Y4G6 2542 aa11.14□□□□□ -0.63
LIMK2-203ENST00000340552 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
LIMK2-203ENST00000340552 Q6YL49 198 aa11.14□□□□□ -0.63
LIMK2-203ENST00000340552 WFDC11Q8NEX6 87 aa11.14□□□□□ -0.63
LIMK2-203ENST00000340552 MXRA5Q9NR99 2828 aa11.13□□□□□ -0.63
LIMK2-203ENST00000340552 A0A0U1RRA0 63 aa11.13□□□□□ -0.63
LIMK2-203ENST00000340552 ITPR3Q14573 2671 aa11.13□□□□□ -0.63
LIMK2-203ENST00000340552 C9orf85Q96MD7 179 aa11.13□□□□□ -0.63
LIMK2-203ENST00000340552 Q9HAA7 133 aa11.13□□□□□ -0.63
LIMK2-203ENST00000340552 SOSTDC1Q6X4U4 206 aa11.12□□□□□ -0.63
LIMK2-203ENST00000340552 LINC01561Q8N1V8 128 aa11.12□□□□□ -0.63
LIMK2-203ENST00000340552 MRAPQ8TCY5 172 aa11.12□□□□□ -0.63
LIMK2-203ENST00000340552 IGHV3-16A0A0C4DH30 117 aa11.12□□□□□ -0.63
LIMK2-203ENST00000340552 NDUFA4O00483 81 aa11.11□□□□□ -0.63
LIMK2-203ENST00000340552 NDUFA1O15239 70 aa11.11□□□□□ -0.63
LIMK2-203ENST00000340552 C9orf129Q5T035 196 aaKnown RBP11.11□□□□□ -0.63
LIMK2-203ENST00000340552 USP17L23D6RBM5 183 aa11.11□□□□□ -0.63
LIMK2-203ENST00000340552 MALP21145 153 aa11.11□□□□□ -0.63
LIMK2-203ENST00000340552 PRIMA1Q86XR5 153 aa11.11□□□□□ -0.63
LIMK2-203ENST00000340552 ZNF625Q96I27 306 aaPredicted RBP11.11□□□□□ -0.63
LIMK2-203ENST00000340552 SYNJ2BPP57105 145 aa11.1□□□□□ -0.63
LIMK2-203ENST00000340552 FHL2Q14192 279 aa11.1□□□□□ -0.63
LIMK2-203ENST00000340552 Q6JHZ5 121 aa11.1□□□□□ -0.63
LIMK2-203ENST00000340552 PSMB8P28062 276 aa11.1□□□□□ -0.63
LIMK2-203ENST00000340552 C10orf99Q6UWK7 81 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms