RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 PRSS2P07478 247 aa12.72□□□□□ -0.37
LRCH3-201ENST00000334859 RNASE1P07998 156 aaKnown RBP12.72□□□□□ -0.37
LRCH3-201ENST00000334859 K7EQD1 137 aa12.71□□□□□ -0.37
LRCH3-201ENST00000334859 SMCPP49901 116 aaPredicted RBP12.71□□□□□ -0.37
LRCH3-201ENST00000334859 RPL36AP83881 106 aaKnown RBP12.71□□□□□ -0.37
LRCH3-201ENST00000334859 RPL36ALQ969Q0 106 aaKnown RBP12.71□□□□□ -0.37
LRCH3-201ENST00000334859 TRBV20-1A0A075B6N2 111 aa12.71□□□□□ -0.38
LRCH3-201ENST00000334859 A0A0B4J2C4 111 aa12.71□□□□□ -0.38
LRCH3-201ENST00000334859 INSL3P51460 131 aa12.71□□□□□ -0.38
LRCH3-201ENST00000334859 LITAFQ99732 161 aa12.71□□□□□ -0.38
LRCH3-201ENST00000334859 NOP10Q9NPE3 64 aaKnown RBP12.71□□□□□ -0.38
LRCH3-201ENST00000334859 C2CD3Q4AC94 2353 aa12.7□□□□□ -0.38
LRCH3-201ENST00000334859 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.7□□□□□ -0.38
LRCH3-201ENST00000334859 IGHV3-33P01772 117 aa12.7□□□□□ -0.38
LRCH3-201ENST00000334859 Q1RN00 199 aa12.7□□□□□ -0.38
LRCH3-201ENST00000334859 CDKN2A-AS1Q9UH64 79 aa12.7□□□□□ -0.38
LRCH3-201ENST00000334859 ERG28Q9UKR5 140 aa12.7□□□□□ -0.38
LRCH3-201ENST00000334859 HELZ2Q9BYK8 2649 aaKnown RBP12.7□□□□□ -0.38
LRCH3-201ENST00000334859 RPL35AP18077 110 aaKnown RBP12.69□□□□□ -0.38
LRCH3-201ENST00000334859 C1QTNF4Q9BXJ3 329 aa12.69□□□□□ -0.38
LRCH3-201ENST00000334859 UNC79Q9P2D8 2635 aa12.69□□□□□ -0.38
LRCH3-201ENST00000334859 TRAV4A0A0B4J268 109 aa12.68□□□□□ -0.38
LRCH3-201ENST00000334859 C16orf95Q9H693 158 aa12.68□□□□□ -0.38
LRCH3-201ENST00000334859 TRBV10-1A0A0K0K1A3 114 aa12.68□□□□□ -0.38
LRCH3-201ENST00000334859 LINC00694P0DN24 101 aa12.68□□□□□ -0.38
LRCH3-201ENST00000334859 ADAMTSL4-AS1Q5T5F5 129 aa12.68□□□□□ -0.38
LRCH3-201ENST00000334859 GAGE12JA6NER3 117 aa12.67□□□□□ -0.38
LRCH3-201ENST00000334859 GIG44P09565 113 aaPredicted RBP12.67□□□□□ -0.38
LRCH3-201ENST00000334859 NPC2P61916 151 aa12.67□□□□□ -0.38
LRCH3-201ENST00000334859 GAGE4Q13068 117 aa12.67□□□□□ -0.38
LRCH3-201ENST00000334859 GAGE5Q13069 117 aa12.67□□□□□ -0.38
LRCH3-201ENST00000334859 ZFAND6Q6FIF0 208 aa12.67□□□□□ -0.38
LRCH3-201ENST00000334859 CMC4P56277 68 aaPredicted RBP12.66□□□□□ -0.38
LRCH3-201ENST00000334859 DAZ2Q13117 558 aaKnown RBP12.66□□□□□ -0.38
LRCH3-201ENST00000334859 DAZ4Q86SG3 579 aaKnown RBP12.66□□□□□ -0.38
LRCH3-201ENST00000334859 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.66□□□□□ -0.38
LRCH3-201ENST00000334859 DAZ3Q9NR90 486 aaKnown RBP12.66□□□□□ -0.38
LRCH3-201ENST00000334859 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 GAGE12HA6NDE8 117 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 IGLV1-51P01701 117 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 MIAQ16674 131 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 SPANXDQ9BXN6 97 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 SPANXCQ9NY87 97 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 TIRAPP58753 221 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 COX6A2Q02221 97 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 FOXI1Q12951 378 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 ATP6V0E2Q8NHE4 81 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
LRCH3-201ENST00000334859 IGLV5-45A0A087WSX0 123 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 GAGE7O76087 117 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 NDUFA7O95182 113 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 GAGE12FP0CL80 117 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 GAGE12GP0CL81 117 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 GAGE12IP0CL82 117 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 NTM-AS1Q6ZSK4 140 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 C16orf74Q96GX8 76 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 TRAV13-1A0A0B4J241 112 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 HERVK_113P63121 156 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 TMEM101Q96IK0 257 aa12.64□□□□□ -0.39
LRCH3-201ENST00000334859 LINC00242Q5T6M2 205 aa12.63□□□□□ -0.39
LRCH3-201ENST00000334859 ANK3Q12955 4377 aaKnown RBP12.63□□□□□ -0.39
LRCH3-201ENST00000334859 DAND5Q8N907 189 aa12.62□□□□□ -0.39
LRCH3-201ENST00000334859 FASNP49327 2511 aaKnown RBP12.62□□□□□ -0.39
LRCH3-201ENST00000334859 PLAC8L1A1L4L8 177 aa12.62□□□□□ -0.39
LRCH3-201ENST00000334859 NDUFA1O15239 70 aa12.62□□□□□ -0.39
LRCH3-201ENST00000334859 TEN1Q86WV5 123 aa12.62□□□□□ -0.39
LRCH3-201ENST00000334859 SIGMAR1Q99720 223 aa12.62□□□□□ -0.39
LRCH3-201ENST00000334859 C19orf73Q9NVV2 129 aa12.62□□□□□ -0.39
LRCH3-201ENST00000334859 C9JAW5 83 aa12.61□□□□□ -0.39
LRCH3-201ENST00000334859 HILS1P60008 231 aa12.61□□□□□ -0.39
LRCH3-201ENST00000334859 SPATA25Q9BR10 227 aa12.61□□□□□ -0.39
LRCH3-201ENST00000334859 UBE2L6O14933 153 aa12.6□□□□□ -0.39
LRCH3-201ENST00000334859 PLA2G2AP14555 144 aa12.6□□□□□ -0.39
LRCH3-201ENST00000334859 FAM110AQ9BQ89 295 aa12.6□□□□□ -0.39
LRCH3-201ENST00000334859 J3QKU1 62 aa12.6□□□□□ -0.39
LRCH3-201ENST00000334859 Q9H8V8 135 aa12.6□□□□□ -0.39
LRCH3-201ENST00000334859 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
LRCH3-201ENST00000334859 HIVEP2P31629 2446 aa12.59□□□□□ -0.39
LRCH3-201ENST00000334859 LOC100131303A0A0U1RQF7 123 aa12.59□□□□□ -0.39
LRCH3-201ENST00000334859 TRIAP1O43715 76 aa12.59□□□□□ -0.39
LRCH3-201ENST00000334859 SMAGPQ0VAQ4 97 aa12.59□□□□□ -0.39
LRCH3-201ENST00000334859 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
LRCH3-201ENST00000334859 PPDPFLQ8WWR9 84 aa12.59□□□□□ -0.39
LRCH3-201ENST00000334859 SLC25A20O43772 301 aa12.59□□□□□ -0.39
LRCH3-201ENST00000334859 TIMM17BO60830 172 aa12.59□□□□□ -0.39
LRCH3-201ENST00000334859 ANKRD29Q8N6D5 301 aa12.59□□□□□ -0.39
LRCH3-201ENST00000334859 TMEM243Q9BU79 118 aa12.59□□□□□ -0.39
LRCH3-201ENST00000334859 TRGV4A0A0C4DH28 118 aa12.58□□□□□ -0.4
LRCH3-201ENST00000334859 IGLV5-39A0A0G2JS06 123 aa12.58□□□□□ -0.4
LRCH3-201ENST00000334859 ZNF625Q96I27 306 aaPredicted RBP12.58□□□□□ -0.4
LRCH3-201ENST00000334859 SMIM1B2RUZ4 78 aa12.58□□□□□ -0.4
LRCH3-201ENST00000334859 CIRBPQ14011 172 aaKnown RBP12.58□□□□□ -0.4
LRCH3-201ENST00000334859 ATXN8Q156A1 80 aa12.58□□□□□ -0.4
LRCH3-201ENST00000334859 CSNK1G2-AS1Q8NCQ2 148 aa12.58□□□□□ -0.4
LRCH3-201ENST00000334859 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
LRCH3-201ENST00000334859 CARD19Q96LW7 228 aa12.57□□□□□ -0.4
LRCH3-201ENST00000334859 SMR3AQ99954 134 aa12.57□□□□□ -0.4
LRCH3-201ENST00000334859 ICOSQ9Y6W8 199 aa12.57□□□□□ -0.4
LRCH3-201ENST00000334859 TRBV30A0A0K0K1B3 111 aa12.56□□□□□ -0.4
LRCH3-201ENST00000334859 A0A0U1RRA0 63 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms