RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 ORMDL2Q53FV1 153 aa13.7□□□□□ -0.22
MRPL40-201ENST00000333130 ENHOQ6UWT2 76 aa13.7□□□□□ -0.22
MRPL40-201ENST00000333130 OR5A1Q8NGJ0 315 aa13.7□□□□□ -0.22
MRPL40-201ENST00000333130 PRSS3P2Q8NHM4 247 aa13.7□□□□□ -0.22
MRPL40-201ENST00000333130 UBE2D4Q9Y2X8 147 aa13.7□□□□□ -0.22
MRPL40-201ENST00000333130 CSDC2Q9Y534 153 aaKnown RBP13.7□□□□□ -0.22
MRPL40-201ENST00000333130 DGAT2L7PQ6IED9 249 aa13.69□□□□□ -0.22
MRPL40-201ENST00000333130 TIMM21Q9BVV7 248 aa13.69□□□□□ -0.22
MRPL40-201ENST00000333130 A0A087WTM6 91 aa13.68□□□□□ -0.22
MRPL40-201ENST00000333130 TRAV8-4A0A0B4J246 113 aa13.68□□□□□ -0.22
MRPL40-201ENST00000333130 RPL39P62891 51 aaKnown RBP13.68□□□□□ -0.22
MRPL40-201ENST00000333130 URB1-AS1Q96HZ7 61 aa13.66□□□□□ -0.22
MRPL40-201ENST00000333130 FA2HQ7L5A8 372 aa13.65□□□□□ -0.22
MRPL40-201ENST00000333130 CDC42SE2Q9NRR3 84 aa13.65□□□□□ -0.22
MRPL40-201ENST00000333130 SPANXA1Q9NS26 97 aa13.65□□□□□ -0.22
MRPL40-201ENST00000333130 SPATA12Q7Z6I5 190 aa13.64□□□□□ -0.23
MRPL40-201ENST00000333130 AP5S1Q9NUS5 200 aa13.64□□□□□ -0.23
MRPL40-201ENST00000333130 CYSLTR1Q9Y271 337 aa13.64□□□□□ -0.23
MRPL40-201ENST00000333130 IGKV3OR2-268A0A0C4DH90 116 aa13.63□□□□□ -0.23
MRPL40-201ENST00000333130 G0S2P27469 103 aa13.63□□□□□ -0.23
MRPL40-201ENST00000333130 C2orf66Q6UXQ4 117 aa13.63□□□□□ -0.23
MRPL40-201ENST00000333130 FAM104AQ969W3 186 aa13.63□□□□□ -0.23
MRPL40-201ENST00000333130 PYGO1Q9Y3Y4 419 aa13.63□□□□□ -0.23
MRPL40-201ENST00000333130 EPPK1P58107 5090 aaKnown RBP13.63□□□□□ -0.23
MRPL40-201ENST00000333130 PKD1P98161 4303 aa13.63□□□□□ -0.23
MRPL40-201ENST00000333130 LINC00614P0C842 121 aa13.62□□□□□ -0.23
MRPL40-201ENST00000333130 ZNF664Q8N3J9 261 aa13.62□□□□□ -0.23
MRPL40-201ENST00000333130 IGLV10-54A0A075B6I4 117 aa13.61□□□□□ -0.23
MRPL40-201ENST00000333130 LRCOL1A6NCL2 159 aa13.61□□□□□ -0.23
MRPL40-201ENST00000333130 RAB5BP61020 215 aa13.61□□□□□ -0.23
MRPL40-201ENST00000333130 MRPS36P82909 103 aaKnown RBP13.61□□□□□ -0.23
MRPL40-201ENST00000333130 CDPF1Q6NVV7 123 aa13.61□□□□□ -0.23
MRPL40-201ENST00000333130 PGPEP1Q9NXJ5 209 aa13.61□□□□□ -0.23
MRPL40-201ENST00000333130 PKHD1P08F94 4074 aa13.61□□□□□ -0.23
MRPL40-201ENST00000333130 C14orf177Q52M58 125 aa13.6□□□□□ -0.23
MRPL40-201ENST00000333130 Q6ZUT4 128 aa13.6□□□□□ -0.23
MRPL40-201ENST00000333130 TOMM6Q96B49 74 aa13.6□□□□□ -0.23
MRPL40-201ENST00000333130 C16orf90A8MZG2 172 aa13.59□□□□□ -0.23
MRPL40-201ENST00000333130 BAALCQ8WXS3 180 aa13.59□□□□□ -0.23
MRPL40-201ENST00000333130 LINC01549A6NIU2 74 aa13.58□□□□□ -0.23
MRPL40-201ENST00000333130 IGIPA6NJ69 53 aa13.58□□□□□ -0.23
MRPL40-201ENST00000333130 NPSP0C0P6 89 aa13.58□□□□□ -0.23
MRPL40-201ENST00000333130 Q8N814 137 aa13.58□□□□□ -0.23
MRPL40-201ENST00000333130 NTN5Q8WTR8 489 aaPredicted RBP13.58□□□□□ -0.23
MRPL40-201ENST00000333130 CHCHD1Q96BP2 118 aaKnown RBP13.58□□□□□ -0.23
MRPL40-201ENST00000333130 A0A096LNJ9 63 aa13.58□□□□□ -0.24
MRPL40-201ENST00000333130 LECT2O14960 151 aa13.58□□□□□ -0.24
MRPL40-201ENST00000333130 KRTAP26-1Q6PEX3 210 aa13.58□□□□□ -0.24
MRPL40-201ENST00000333130 IGLV4-3A0A075B6K6 122 aa13.57□□□□□ -0.24
MRPL40-201ENST00000333130 SS18Q15532 418 aa13.57□□□□□ -0.24
MRPL40-201ENST00000333130 MAPKAPK5-AS1Q8N8E1 139 aa13.57□□□□□ -0.24
MRPL40-201ENST00000333130 TIMM17AQ99595 171 aa13.57□□□□□ -0.24
MRPL40-201ENST00000333130 OPRPNQ99935 248 aaPredicted RBP13.57□□□□□ -0.24
MRPL40-201ENST00000333130 CCL25O15444 150 aa13.56□□□□□ -0.24
MRPL40-201ENST00000333130 KRTAP10-2P60368 255 aa13.56□□□□□ -0.24
MRPL40-201ENST00000333130 RNASE13Q5GAN3 156 aaKnown RBP13.56□□□□□ -0.24
MRPL40-201ENST00000333130 LINC00959A0A1B0GUT2 108 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST1H2BKO60814 126 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST1H2BJP06899 126 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST1H2BOP23527 126 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST1H2BBP33778 126 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST1H2BDP58876 126 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 LINC00310P59036 64 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST1H2BCP62807 126 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST2H2BEQ16778 126 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-201ENST00000333130 ERASQ7Z444 233 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 BAGE3Q86Y29 109 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 CHCHD10Q8WYQ3 142 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST1H2BHQ93079 126 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 TMEM141Q96I45 108 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST1H2BNQ99877 126 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HIST1H2BMQ99879 126 aa13.55□□□□□ -0.24
MRPL40-201ENST00000333130 HBDP02042 147 aa13.54□□□□□ -0.24
MRPL40-201ENST00000333130 IGLV5-52A0A0A0MRZ9 124 aa13.53□□□□□ -0.24
MRPL40-201ENST00000333130 GAGE12HA6NDE8 117 aa13.53□□□□□ -0.24
MRPL40-201ENST00000333130 DNAH11Q96DT5 4516 aa13.53□□□□□ -0.24
MRPL40-201ENST00000333130 C1orf196B1AJZ1 125 aa13.52□□□□□ -0.25
MRPL40-201ENST00000333130 USP17L23D6RBM5 183 aa13.52□□□□□ -0.25
MRPL40-201ENST00000333130 WFDC2Q14508 124 aa13.52□□□□□ -0.25
MRPL40-201ENST00000333130 PMCHL1Q16048 86 aa13.52□□□□□ -0.25
MRPL40-201ENST00000333130 Q6ZN92 141 aa13.52□□□□□ -0.25
MRPL40-201ENST00000333130 LINC00173Q6ZV60 143 aa13.52□□□□□ -0.25
MRPL40-201ENST00000333130 SCGB3A1Q96QR1 104 aa13.52□□□□□ -0.25
MRPL40-201ENST00000333130 AMELXQ99217 191 aa13.52□□□□□ -0.25
MRPL40-201ENST00000333130 SERF1AO75920 110 aa13.51□□□□□ -0.25
MRPL40-201ENST00000333130 XCL1P47992 114 aa13.51□□□□□ -0.25
MRPL40-201ENST00000333130 PDZD11Q5EBL8 140 aa13.51□□□□□ -0.25
MRPL40-201ENST00000333130 CFAP161Q6P656 301 aa13.51□□□□□ -0.25
MRPL40-201ENST00000333130 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.5□□□□□ -0.25
MRPL40-201ENST00000333130 PAPPA-AS1Q5QFB9 102 aa13.5□□□□□ -0.25
MRPL40-201ENST00000333130 TEX43Q6ZNM6 134 aa13.5□□□□□ -0.25
MRPL40-201ENST00000333130 TRAV13-1A0A0B4J241 112 aa13.49□□□□□ -0.25
MRPL40-201ENST00000333130 IFITM10A6NMD0 228 aa13.49□□□□□ -0.25
MRPL40-201ENST00000333130 HSBP1O75506 76 aa13.48□□□□□ -0.25
MRPL40-201ENST00000333130 C2orf88Q9BSF0 95 aa13.48□□□□□ -0.25
MRPL40-201ENST00000333130 FOXI1Q12951 378 aa13.47□□□□□ -0.25
MRPL40-201ENST00000333130 CD164L2Q6UWJ8 174 aa13.47□□□□□ -0.25
MRPL40-201ENST00000333130 VCX2Q9H322 139 aa13.47□□□□□ -0.25
MRPL40-201ENST00000333130 BIRC6Q9NR09 4857 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms