RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 Q6ZUT4 128 aa7.01□□□□□ -1.29
SS18L1-201ENST00000331758 UBE2WQ96B02 151 aa7.01□□□□□ -1.29
SS18L1-201ENST00000331758 COX8CQ7Z4L0 72 aa7.01□□□□□ -1.29
SS18L1-201ENST00000331758 ZNF580Q9UK33 172 aa7.01□□□□□ -1.29
SS18L1-201ENST00000331758 TRAV4A0A0B4J268 109 aa7□□□□□ -1.29
SS18L1-201ENST00000331758 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
SS18L1-201ENST00000331758 TRBV10-1A0A0K0K1A3 114 aa7□□□□□ -1.29
SS18L1-201ENST00000331758 UBE2DNLQ8IWF7 75 aa7□□□□□ -1.29
SS18L1-201ENST00000331758 ZZEF1O43149 2961 aa7□□□□□ -1.29
SS18L1-201ENST00000331758 FAM222AQ5U5X8 452 aa7□□□□□ -1.29
SS18L1-201ENST00000331758 C9orf85Q96MD7 179 aa7□□□□□ -1.29
SS18L1-201ENST00000331758 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.99□□□□□ -1.29
SS18L1-201ENST00000331758 NEXN-AS1Q8NBZ9 246 aa6.99□□□□□ -1.29
SS18L1-201ENST00000331758 MRPL23Q16540 153 aaKnown RBP6.99□□□□□ -1.29
SS18L1-201ENST00000331758 COL12A1Q99715 3063 aa6.99□□□□□ -1.29
SS18L1-201ENST00000331758 DAND5Q8N907 189 aa6.99□□□□□ -1.29
SS18L1-201ENST00000331758 OVOL2Q9BRP0 275 aa6.99□□□□□ -1.29
SS18L1-201ENST00000331758 LINC00467Q9BRT7 94 aa6.99□□□□□ -1.29
SS18L1-201ENST00000331758 PRO0255Q9UI72 69 aa6.99□□□□□ -1.29
SS18L1-201ENST00000331758 TRBV27A0A0K0K1C4 114 aa6.98□□□□□ -1.29
SS18L1-201ENST00000331758 SLC25A29Q8N8R3 303 aa6.98□□□□□ -1.29
SS18L1-201ENST00000331758 VSIG2Q96IQ7 327 aa6.98□□□□□ -1.29
SS18L1-201ENST00000331758 POLR2KP53803 58 aaKnown RBP6.98□□□□□ -1.29
SS18L1-201ENST00000331758 UFSP1Q6NVU6 142 aa6.98□□□□□ -1.29
SS18L1-201ENST00000331758 PTH2Q96A98 100 aa6.98□□□□□ -1.29
SS18L1-201ENST00000331758 A4D1N5 150 aa6.97□□□□□ -1.29
SS18L1-201ENST00000331758 ZNF561-AS1K7EIQ3 104 aa6.97□□□□□ -1.29
SS18L1-201ENST00000331758 GAGE2AQ6NT46 116 aa6.97□□□□□ -1.29
SS18L1-201ENST00000331758 CHD6Q8TD26 2715 aa6.97□□□□□ -1.29
SS18L1-201ENST00000331758 MUC3AQ02505 3323 aa6.97□□□□□ -1.29
SS18L1-201ENST00000331758 HIST1H4AP62805 103 aaKnown RBP6.97□□□□□ -1.29
SS18L1-201ENST00000331758 IGLV4-3A0A075B6K6 122 aa6.97□□□□□ -1.29
SS18L1-201ENST00000331758 IGHV3-30-3P0DP02 117 aa6.97□□□□□ -1.29
SS18L1-201ENST00000331758 MUSTN1Q8IVN3 82 aa6.97□□□□□ -1.29
SS18L1-201ENST00000331758 TRBV6-5A0A0K0K1A5 114 aa6.96□□□□□ -1.29
SS18L1-201ENST00000331758 CFC1BP0CG36 223 aa6.96□□□□□ -1.29
SS18L1-201ENST00000331758 CFC1P0CG37 223 aa6.96□□□□□ -1.29
SS18L1-201ENST00000331758 INAFM2P0DMQ5 153 aa6.96□□□□□ -1.3
SS18L1-201ENST00000331758 ICOSQ9Y6W8 199 aa6.96□□□□□ -1.3
SS18L1-201ENST00000331758 IGHV3-30P01768 117 aa6.96□□□□□ -1.3
SS18L1-201ENST00000331758 IGHV3-33P01772 117 aa6.96□□□□□ -1.3
SS18L1-201ENST00000331758 IGHV3-30-5P0DP03 117 aa6.96□□□□□ -1.3
SS18L1-201ENST00000331758 TEN1Q86WV5 123 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 MAPKAPK5-AS1Q8N8E1 139 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 NTN5Q8WTR8 489 aaPredicted RBP6.95□□□□□ -1.3
SS18L1-201ENST00000331758 Q9HAA7 133 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 MGAM2Q2M2H8 2515 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 TRAV26-1A0A087WT03 109 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 CDKN2A-AS1Q9UH64 79 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 TEP1Q99973 2627 aaKnown RBP6.95□□□□□ -1.3
SS18L1-201ENST00000331758 RS1O15537 224 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 NDUFA7O95182 113 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 TSHBP01222 138 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 CFAP47Q6ZTR5 3102 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 A0A096LNJ9 63 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 PSCAO43653 123 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 IGLV1-51P01701 117 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 LAMTOR3Q9UHA4 124 aa6.95□□□□□ -1.3
SS18L1-201ENST00000331758 CARD19Q96LW7 228 aa6.94□□□□□ -1.3
SS18L1-201ENST00000331758 MUC4Q99102 2169 aa6.94□□□□□ -1.3
SS18L1-201ENST00000331758 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
SS18L1-201ENST00000331758 FOXI1Q12951 378 aa6.94□□□□□ -1.3
SS18L1-201ENST00000331758 FAM110AQ9BQ89 295 aa6.94□□□□□ -1.3
SS18L1-201ENST00000331758 ZMAT4Q9H898 229 aa6.94□□□□□ -1.3
SS18L1-201ENST00000331758 SPANXB1Q9NS25 103 aaPredicted RBP6.94□□□□□ -1.3
SS18L1-201ENST00000331758 LOC100131303A0A0U1RQF7 123 aa6.94□□□□□ -1.3
SS18L1-201ENST00000331758 ZNF22P17026 224 aaPredicted RBP6.94□□□□□ -1.3
SS18L1-201ENST00000331758 OXLD1Q5BKU9 147 aa6.94□□□□□ -1.3
SS18L1-201ENST00000331758 KLK12Q9UKR0 248 aa6.94□□□□□ -1.3
SS18L1-201ENST00000331758 IGKV2D-24A0A075B6R9 120 aa6.93□□□□□ -1.3
SS18L1-201ENST00000331758 C1orf158Q8N1D5 194 aa6.93□□□□□ -1.3
SS18L1-201ENST00000331758 EDA2RQ9HAV5 297 aa6.93□□□□□ -1.3
SS18L1-201ENST00000331758 SMIM9A6NGZ8 99 aa6.92□□□□□ -1.3
SS18L1-201ENST00000331758 IFITM1P13164 125 aa6.92□□□□□ -1.3
SS18L1-201ENST00000331758 Q8N2B8 174 aa6.92□□□□□ -1.3
SS18L1-201ENST00000331758 MAST4O15021 2626 aa6.92□□□□□ -1.3
SS18L1-201ENST00000331758 COX7A2LO14548 114 aa6.92□□□□□ -1.3
SS18L1-201ENST00000331758 CRYBA4P53673 196 aa6.92□□□□□ -1.3
SS18L1-201ENST00000331758 RPL32P62910 135 aaKnown RBP6.92□□□□□ -1.3
SS18L1-201ENST00000331758 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
SS18L1-201ENST00000331758 COX7B2Q8TF08 81 aa6.92□□□□□ -1.3
SS18L1-201ENST00000331758 C16orf95Q9H693 158 aa6.91□□□□□ -1.3
SS18L1-201ENST00000331758 TRBV6-4A0A1B0GX49 114 aa6.91□□□□□ -1.3
SS18L1-201ENST00000331758 FSHBP01225 129 aa6.91□□□□□ -1.3
SS18L1-201ENST00000331758 HERV-K104P63124 156 aa6.91□□□□□ -1.3
SS18L1-201ENST00000331758 A8MZ25 164 aa6.91□□□□□ -1.3
SS18L1-201ENST00000331758 C15orf53Q8NAA6 179 aa6.91□□□□□ -1.3
SS18L1-201ENST00000331758 SPATA25Q9BR10 227 aa6.91□□□□□ -1.3
SS18L1-201ENST00000331758 C1orf43Q9BWL3 253 aa6.91□□□□□ -1.3
SS18L1-201ENST00000331758 SS18L2Q9UHA2 77 aa6.91□□□□□ -1.3
SS18L1-201ENST00000331758 TINCRA0A1B0GVN0 87 aa6.9□□□□□ -1.3
SS18L1-201ENST00000331758 LYRM9A8MSI8 78 aa6.9□□□□□ -1.3
SS18L1-201ENST00000331758 LRBAP50851 2863 aa6.9□□□□□ -1.3
SS18L1-201ENST00000331758 KALRNO60229 2985 aa6.9□□□□□ -1.3
SS18L1-201ENST00000331758 A0A096LNT2 108 aa6.9□□□□□ -1.3
SS18L1-201ENST00000331758 IGHV4-28A0A0C4DH34 117 aa6.9□□□□□ -1.3
SS18L1-201ENST00000331758 ANKRD29Q8N6D5 301 aa6.9□□□□□ -1.3
SS18L1-201ENST00000331758 TRBV6-8A0A0A6YYG3 113 aa6.9□□□□□ -1.31
SS18L1-201ENST00000331758 SHISA2Q6UWI4 295 aa6.9□□□□□ -1.31
SS18L1-201ENST00000331758 TRAV13-2A0A0B4J235 113 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms