RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 RBMY1BA6NDE4 496 aaKnown RBP6.09□□□□□ -1.43
SKA2-201ENST00000330137 RBMY1EA6NEQ0 496 aaKnown RBP6.09□□□□□ -1.43
SKA2-201ENST00000330137 RBMY1DP0C7P1 496 aaKnown RBP6.09□□□□□ -1.43
SKA2-201ENST00000330137 RBMY1A1P0DJD3 496 aaKnown RBP6.09□□□□□ -1.43
SKA2-201ENST00000330137 RBMY1CP0DJD4 496 aa6.09□□□□□ -1.43
SKA2-201ENST00000330137 FHL2Q14192 279 aa6.09□□□□□ -1.43
SKA2-201ENST00000330137 RBMY1FQ15415 496 aaKnown RBP6.09□□□□□ -1.43
SKA2-201ENST00000330137 Q8NA96 180 aa6.09□□□□□ -1.43
SKA2-201ENST00000330137 FAM218AQ96MZ4 157 aa6.09□□□□□ -1.43
SKA2-201ENST00000330137 Q9H8V8 135 aa6.09□□□□□ -1.43
SKA2-201ENST00000330137 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
SKA2-201ENST00000330137 CCKP06307 115 aa6.08□□□□□ -1.44
SKA2-201ENST00000330137 ZNF625Q96I27 306 aaPredicted RBP6.08□□□□□ -1.44
SKA2-201ENST00000330137 CDKN2A-AS1Q9UH64 79 aa6.08□□□□□ -1.44
SKA2-201ENST00000330137 JMJD7-PLA2G4BH0Y9G9 81 aa6.08□□□□□ -1.44
SKA2-201ENST00000330137 J3QL48 77 aa6.08□□□□□ -1.44
SKA2-201ENST00000330137 C5orf56Q8N8D9 126 aa6.08□□□□□ -1.44
SKA2-201ENST00000330137 TMEM243Q9BU79 118 aa6.08□□□□□ -1.44
SKA2-201ENST00000330137 NDUFC1O43677 76 aa6.07□□□□□ -1.44
SKA2-201ENST00000330137 CRPP02741 224 aa6.07□□□□□ -1.44
SKA2-201ENST00000330137 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
SKA2-201ENST00000330137 SIRPDQ9H106 197 aa6.07□□□□□ -1.44
SKA2-201ENST00000330137 F6UB75 175 aa6.07□□□□□ -1.44
SKA2-201ENST00000330137 G3V318 75 aa6.07□□□□□ -1.44
SKA2-201ENST00000330137 GNLYP22749 145 aa6.07□□□□□ -1.44
SKA2-201ENST00000330137 KLKP1Q107X0 134 aa6.07□□□□□ -1.44
SKA2-201ENST00000330137 IGKV3D-7A0A0C4DH55 119 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 GHRHP01286 108 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 UNQ9165/PRO28630Q6UXU0 137 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 RHPN1-AS1Q9BWJ2 59 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 GCN1Q92616 2671 aaKnown RBP6.06□□□□□ -1.44
SKA2-201ENST00000330137 TRAV7A0A075B6U4 112 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 J3QLI3 93 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 LYNX1G3V0Z9 82 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 LYNX1P0DP58 116 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 XCL1P47992 114 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 XCL2Q9UBD3 114 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 MOB4Q9Y3A3 225 aa6.06□□□□□ -1.44
SKA2-201ENST00000330137 NBASA2RRP1 2371 aa6.05□□□□□ -1.44
SKA2-201ENST00000330137 RP1L1Q8IWN7 2480 aaPredicted RBP6.05□□□□□ -1.44
SKA2-201ENST00000330137 ICE1Q9Y2F5 2266 aa6.05□□□□□ -1.44
SKA2-201ENST00000330137 KNCNA6PVL3 124 aa6.05□□□□□ -1.44
SKA2-201ENST00000330137 A8MZ25 164 aa6.05□□□□□ -1.44
SKA2-201ENST00000330137 C10orf105Q8TEF2 133 aa6.05□□□□□ -1.44
SKA2-201ENST00000330137 DEFB104AQ8WTQ1 72 aa6.05□□□□□ -1.44
SKA2-201ENST00000330137 LINC00167Q96N53 147 aa6.05□□□□□ -1.44
SKA2-201ENST00000330137 C14orf132Q9NPU4 83 aa6.05□□□□□ -1.44
SKA2-201ENST00000330137 RELNP78509 3460 aa6.05□□□□□ -1.44
SKA2-201ENST00000330137 FASNP49327 2511 aaKnown RBP6.05□□□□□ -1.44
SKA2-201ENST00000330137 SMIM1B2RUZ4 78 aa6.05□□□□□ -1.44
SKA2-201ENST00000330137 H7BZZ5 65 aa6.04□□□□□ -1.44
SKA2-201ENST00000330137 TRBV12-3P01733 135 aa6.04□□□□□ -1.44
SKA2-201ENST00000330137 A0A087WVE0 104 aa6.04□□□□□ -1.44
SKA2-201ENST00000330137 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.04□□□□□ -1.44
SKA2-201ENST00000330137 SNRPD3P62318 126 aaKnown RBP6.04□□□□□ -1.44
SKA2-201ENST00000330137 LINC00242Q5T6M2 205 aa6.04□□□□□ -1.44
SKA2-201ENST00000330137 LINC00336Q6ZUF6 198 aa6.04□□□□□ -1.44
SKA2-201ENST00000330137 Q9HAA7 133 aa6.04□□□□□ -1.44
SKA2-201ENST00000330137 ORMDL1Q9P0S3 153 aa6.04□□□□□ -1.44
SKA2-201ENST00000330137 MYO18BQ8IUG5 2567 aa6.03□□□□□ -1.44
SKA2-201ENST00000330137 DEFB1P60022 68 aa6.03□□□□□ -1.44
SKA2-201ENST00000330137 TMEM86BQ8N661 226 aa6.03□□□□□ -1.44
SKA2-201ENST00000330137 LINC00467Q9BRT7 94 aa6.03□□□□□ -1.44
SKA2-201ENST00000330137 TENM4Q6N022 2769 aa6.02□□□□□ -1.44
SKA2-201ENST00000330137 IGHV3-53P01767 116 aa6.02□□□□□ -1.45
SKA2-201ENST00000330137 DGAT2L7PQ6IED9 249 aa6.02□□□□□ -1.45
SKA2-201ENST00000330137 C16orf95Q9H693 158 aa6.02□□□□□ -1.45
SKA2-201ENST00000330137 HELZ2Q9BYK8 2649 aaKnown RBP6.02□□□□□ -1.45
SKA2-201ENST00000330137 IGHV3OR16-12A0A075B7B8 117 aa6.02□□□□□ -1.45
SKA2-201ENST00000330137 LINC00528Q8N1L1 170 aa6.02□□□□□ -1.45
SKA2-201ENST00000330137 A0A087WYN8 130 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 A0A1W2PRX2 142 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 FBXL19-AS1Q494R0 122 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.01□□□□□ -1.45
SKA2-201ENST00000330137 SMIM11BQ8TCY0 68 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 C1orf43Q9BWL3 253 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 KRTAP3-2Q9BYR7 98 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 UBL5Q9BZL1 73 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 BAHCC1Q9P281 2608 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 NACAE9PAV3 2078 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 TMEM256-PLSCR3K7ERE1 68 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 LY6G6DO95868 133 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 COX6A2Q02221 97 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 C20orf197Q8N268 126 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 LINC00337Q8N6G1 96 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 SND1-IT1Q9HBX3 110 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 IGKV2-28A0A075B6P5 120 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 A8MTW9 85 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 CCL21O00585 134 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 IGKV2D-28P01615 120 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 SAA4P35542 130 aa6.01□□□□□ -1.45
SKA2-201ENST00000330137 LCE2DQ5TA82 110 aaPredicted RBP6.01□□□□□ -1.45
SKA2-201ENST00000330137 COL12A1Q99715 3063 aa6□□□□□ -1.45
SKA2-201ENST00000330137 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6□□□□□ -1.45
SKA2-201ENST00000330137 IGKV2-29A2NJV5 120 aaPredicted RBP6□□□□□ -1.45
SKA2-201ENST00000330137 K7EQG2 157 aa6□□□□□ -1.45
SKA2-201ENST00000330137 RS1O15537 224 aa6□□□□□ -1.45
SKA2-201ENST00000330137 RNASE13Q5GAN3 156 aaKnown RBP6□□□□□ -1.45
SKA2-201ENST00000330137 V9GYY9 64 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms