RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 TRBV30A0A0K0K1B3 111 aa11.46□□□□□ -0.57
PTPN21-201ENST00000328736 ZFAND3Q9H8U3 227 aa11.46□□□□□ -0.58
PTPN21-201ENST00000328736 DCANP1Q8TF63 244 aa11.46□□□□□ -0.58
PTPN21-201ENST00000328736 PYGO1Q9Y3Y4 419 aa11.46□□□□□ -0.58
PTPN21-201ENST00000328736 KPRPQ5T749 579 aaPredicted RBP11.45□□□□□ -0.58
PTPN21-201ENST00000328736 ZNF295-AS1Q8N0V1 137 aa11.45□□□□□ -0.58
PTPN21-201ENST00000328736 RNASE8Q8TDE3 154 aaKnown RBP11.45□□□□□ -0.58
PTPN21-201ENST00000328736 NDUFV3P56181 108 aaKnown RBP11.45□□□□□ -0.58
PTPN21-201ENST00000328736 IGKV2-28A0A075B6P5 120 aa11.45□□□□□ -0.58
PTPN21-201ENST00000328736 LY6G6CO95867 125 aa11.45□□□□□ -0.58
PTPN21-201ENST00000328736 IGKV2D-28P01615 120 aa11.45□□□□□ -0.58
PTPN21-201ENST00000328736 M0R2N4 97 aa11.44□□□□□ -0.58
PTPN21-201ENST00000328736 TIMM17BO60830 172 aa11.44□□□□□ -0.58
PTPN21-201ENST00000328736 ZNF843Q8N446 348 aa11.44□□□□□ -0.58
PTPN21-201ENST00000328736 PPDPFQ9H3Y8 114 aa11.44□□□□□ -0.58
PTPN21-201ENST00000328736 MLST8Q9BVC4 326 aa11.44□□□□□ -0.58
PTPN21-201ENST00000328736 NDUFC1O43677 76 aa11.44□□□□□ -0.58
PTPN21-201ENST00000328736 NBASA2RRP1 2371 aa11.43□□□□□ -0.58
PTPN21-201ENST00000328736 RBX1P62877 108 aa11.43□□□□□ -0.58
PTPN21-201ENST00000328736 HRCT1Q6UXD1 115 aa11.43□□□□□ -0.58
PTPN21-201ENST00000328736 C3orf84H3BNL1 204 aa11.43□□□□□ -0.58
PTPN21-201ENST00000328736 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
PTPN21-201ENST00000328736 C10orf99Q6UWK7 81 aa11.43□□□□□ -0.58
PTPN21-201ENST00000328736 TRIAP1O43715 76 aa11.42□□□□□ -0.58
PTPN21-201ENST00000328736 Q8N9L7 120 aa11.42□□□□□ -0.58
PTPN21-201ENST00000328736 PLAC8L1A1L4L8 177 aa11.42□□□□□ -0.58
PTPN21-201ENST00000328736 PCDH15Q96QU1 1955 aa11.42□□□□□ -0.58
PTPN21-201ENST00000328736 C11orf71Q6IPW1 123 aa11.42□□□□□ -0.58
PTPN21-201ENST00000328736 TRBV6-5A0A0K0K1A5 114 aa11.42□□□□□ -0.58
PTPN21-201ENST00000328736 UBE2D2P62837 147 aa11.42□□□□□ -0.58
PTPN21-201ENST00000328736 COX17Q14061 63 aa11.42□□□□□ -0.58
PTPN21-201ENST00000328736 A0A0J9YWU9 116 aa11.41□□□□□ -0.58
PTPN21-201ENST00000328736 U3KQK5 164 aa11.41□□□□□ -0.58
PTPN21-201ENST00000328736 Q8N976 141 aa11.41□□□□□ -0.58
PTPN21-201ENST00000328736 MUC7Q8TAX7 377 aa11.4□□□□□ -0.58
PTPN21-201ENST00000328736 TRBV27A0A0K0K1C4 114 aa11.4□□□□□ -0.59
PTPN21-201ENST00000328736 PROK1P58294 105 aa11.4□□□□□ -0.59
PTPN21-201ENST00000328736 IGLV9-49A0A0B4J1Y8 123 aa11.39□□□□□ -0.59
PTPN21-201ENST00000328736 FAM19A3Q7Z5A8 133 aa11.39□□□□□ -0.59
PTPN21-201ENST00000328736 WFDC13Q8IUB5 93 aa11.39□□□□□ -0.59
PTPN21-201ENST00000328736 LINC00959A0A1B0GUT2 108 aa11.39□□□□□ -0.59
PTPN21-201ENST00000328736 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.39□□□□□ -0.595e-6■■■■□ 22.8
PTPN21-201ENST00000328736 CLUHP3Q96NS8 147 aa11.39□□□□□ -0.59
PTPN21-201ENST00000328736 RNF185Q96GF1 192 aa11.38□□□□□ -0.59
PTPN21-201ENST00000328736 LINC01006Q8NI28 216 aa11.38□□□□□ -0.59
PTPN21-201ENST00000328736 SHANK1Q9Y566 2161 aa11.38□□□□□ -0.59
PTPN21-201ENST00000328736 PCNX3Q9H6A9 2034 aa11.38□□□□□ -0.59
PTPN21-201ENST00000328736 MRPS36P82909 103 aaKnown RBP11.38□□□□□ -0.59
PTPN21-201ENST00000328736 MT-ATP8P03928 68 aa11.37□□□□□ -0.59
PTPN21-201ENST00000328736 Q6ZQY7 126 aa11.37□□□□□ -0.59
PTPN21-201ENST00000328736 EIF4EBP1Q13541 118 aaPredicted RBP11.37□□□□□ -0.59
PTPN21-201ENST00000328736 TSHBP01222 138 aa11.37□□□□□ -0.59
PTPN21-201ENST00000328736 FREM1Q5H8C1 2179 aa11.37□□□□□ -0.59
PTPN21-201ENST00000328736 PCNX2A6NKB5 2137 aa11.36□□□□□ -0.59
PTPN21-201ENST00000328736 ALPK3Q96L96 1907 aa11.36□□□□□ -0.59
PTPN21-201ENST00000328736 SPTAN1Q13813 2472 aaKnown RBP11.36□□□□□ -0.59
PTPN21-201ENST00000328736 C10orf25Q5T742 122 aa11.36□□□□□ -0.59
PTPN21-201ENST00000328736 RPL37AP8A6NKH3 93 aa11.35□□□□□ -0.59
PTPN21-201ENST00000328736 MBD6Q96DN6 1003 aa11.35□□□□□ -0.59
PTPN21-201ENST00000328736 NUPR2A6NF83 97 aa11.35□□□□□ -0.59
PTPN21-201ENST00000328736 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.35□□□□□ -0.59
PTPN21-201ENST00000328736 CRIP1P50238 77 aa11.35□□□□□ -0.59
PTPN21-201ENST00000328736 ZFHX2Q9C0A1 2572 aaPredicted RBP11.35□□□□□ -0.59
PTPN21-201ENST00000328736 ZNF73O43830 326 aaPredicted RBP11.34□□□□□ -0.59
PTPN21-201ENST00000328736 MAPKAPK5-AS1Q8N8E1 139 aa11.34□□□□□ -0.59
PTPN21-201ENST00000328736 RPL28P46779 137 aaKnown RBP11.33□□□□□ -0.6
PTPN21-201ENST00000328736 MED13LQ71F56 2210 aa11.33□□□□□ -0.6
PTPN21-201ENST00000328736 MRGPRG-AS1Q2M3A8 158 aa11.33□□□□□ -0.6
PTPN21-201ENST00000328736 TECTAO75443 2155 aa11.33□□□□□ -0.6
PTPN21-201ENST00000328736 LOC100131303A0A0U1RQF7 123 aa11.32□□□□□ -0.6
PTPN21-201ENST00000328736 Q8IZM0 81 aa11.32□□□□□ -0.6
PTPN21-201ENST00000328736 A6NED7 52 aa11.32□□□□□ -0.6
PTPN21-201ENST00000328736 NANOS2P60321 138 aaKnown RBP11.32□□□□□ -0.6
PTPN21-201ENST00000328736 C18orf65Q6ZTR6 163 aa11.32□□□□□ -0.6
PTPN21-201ENST00000328736 SERP2Q8N6R1 65 aa11.32□□□□□ -0.6
PTPN21-201ENST00000328736 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
PTPN21-201ENST00000328736 IMUPQ9GZP8 106 aa11.32□□□□□ -0.6
PTPN21-201ENST00000328736 PRM2P04554 102 aa11.31□□□□□ -0.6
PTPN21-201ENST00000328736 SMIM11BQ8TCY0 68 aa11.31□□□□□ -0.6
PTPN21-201ENST00000328736 Q6ZVQ6 151 aa11.31□□□□□ -0.6
PTPN21-201ENST00000328736 Q8N6K4 173 aa11.31□□□□□ -0.6
PTPN21-201ENST00000328736 RNASE3P12724 160 aaKnown RBP11.31□□□□□ -0.6
PTPN21-201ENST00000328736 MRPS12O15235 138 aaKnown RBP11.31□□□□□ -0.6
PTPN21-201ENST00000328736 KLLNB2CW77 178 aa11.3□□□□□ -0.6
PTPN21-201ENST00000328736 NDUFA7O95182 113 aa11.3□□□□□ -0.6
PTPN21-201ENST00000328736 KIAA1549Q9HCM3 1950 aa11.3□□□□□ -0.6
PTPN21-201ENST00000328736 IGLV1-40P01703 118 aa11.3□□□□□ -0.6
PTPN21-201ENST00000328736 WFDC10AQ9H1F0 79 aa11.29□□□□□ -0.6
PTPN21-201ENST00000328736 SNURFQ9Y675 71 aa11.29□□□□□ -0.6
PTPN21-201ENST00000328736 NRACQ8N912 160 aa11.29□□□□□ -0.6
PTPN21-201ENST00000328736 TANC2Q9HCD6 1990 aa11.29□□□□□ -0.6
PTPN21-201ENST00000328736 NCOA6Q14686 2063 aaPredicted RBP11.29□□□□□ -0.6
PTPN21-201ENST00000328736 NOTCH3Q9UM47 2321 aa11.29□□□□□ -0.6
PTPN21-201ENST00000328736 LST1O00453 97 aa11.29□□□□□ -0.6
PTPN21-201ENST00000328736 A8MZ25 164 aa11.29□□□□□ -0.6
PTPN21-201ENST00000328736 CEP192Q8TEP8 1941 aa11.28□□□□□ -0.6
PTPN21-201ENST00000328736 CACNA1HO95180 2353 aa11.28□□□□□ -0.6
PTPN21-201ENST00000328736 M0QXV9 152 aa11.28□□□□□ -0.6
PTPN21-201ENST00000328736 Q6ZS46 218 aa11.28□□□□□ -0.6
PTPN21-201ENST00000328736 FAM30AQ9NZY2 134 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms