RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 IGKV2-29A2NJV5 120 aaPredicted RBP12.49□□□□□ -0.41
SYNE4-201ENST00000324444 PMVKQ15126 192 aa12.49□□□□□ -0.41
SYNE4-201ENST00000324444 LINC01545Q5VT33 79 aa12.49□□□□□ -0.41
SYNE4-201ENST00000324444 VCX2Q9H322 139 aa12.49□□□□□ -0.41
SYNE4-201ENST00000324444 FGF6P10767 208 aa12.48□□□□□ -0.41
SYNE4-201ENST00000324444 PYY3Q5JQD4 70 aa12.48□□□□□ -0.41
SYNE4-201ENST00000324444 OR5A1Q8NGJ0 315 aa12.48□□□□□ -0.41
SYNE4-201ENST00000324444 PLECQ15149 4684 aaKnown RBP12.48□□□□□ -0.41
SYNE4-201ENST00000324444 A0A087WX48 190 aa12.47□□□□□ -0.41
SYNE4-201ENST00000324444 TRAV8-6A0A0B4J262 113 aa12.47□□□□□ -0.41
SYNE4-201ENST00000324444 NUPR2A6NF83 97 aa12.47□□□□□ -0.41
SYNE4-201ENST00000324444 H0Y8G0 127 aa12.47□□□□□ -0.41
SYNE4-201ENST00000324444 BAALCQ8WXS3 180 aa12.47□□□□□ -0.41
SYNE4-201ENST00000324444 C2orf88Q9BSF0 95 aa12.47□□□□□ -0.41
SYNE4-201ENST00000324444 S100A12P80511 92 aa12.46□□□□□ -0.41
SYNE4-201ENST00000324444 LYPD5Q6UWN5 251 aa12.46□□□□□ -0.41
SYNE4-201ENST00000324444 TEX43Q6ZNM6 134 aa12.46□□□□□ -0.41
SYNE4-201ENST00000324444 IGLV4-3A0A075B6K6 122 aa12.45□□□□□ -0.42
SYNE4-201ENST00000324444 A0A1B0GUV1 79 aa12.45□□□□□ -0.42
SYNE4-201ENST00000324444 TCTAP57738 103 aa12.45□□□□□ -0.42
SYNE4-201ENST00000324444 KLK5Q9Y337 293 aaPredicted RBP12.45□□□□□ -0.42
SYNE4-201ENST00000324444 TMEM262E9PQX1 116 aa12.44□□□□□ -0.42
SYNE4-201ENST00000324444 PLNP26678 52 aa12.44□□□□□ -0.42
SYNE4-201ENST00000324444 CST9LQ9H4G1 147 aa12.44□□□□□ -0.42
SYNE4-201ENST00000324444 CHTOPQ9Y3Y2 248 aaKnown RBP12.44□□□□□ -0.42
SYNE4-201ENST00000324444 PRSS29PA6NIE9 313 aa12.43□□□□□ -0.42
SYNE4-201ENST00000324444 F8VRH5 84 aa12.43□□□□□ -0.42
SYNE4-201ENST00000324444 GAGE6Q13070 117 aa12.43□□□□□ -0.42
SYNE4-201ENST00000324444 ODF1Q14990 250 aa12.43□□□□□ -0.42
SYNE4-201ENST00000324444 AMELXQ99217 191 aa12.43□□□□□ -0.42
SYNE4-201ENST00000324444 ALMS1Q8TCU4 4167 aa12.43□□□□□ -0.42
SYNE4-201ENST00000324444 IGLL5B9A064 214 aa12.43□□□□□ -0.42
SYNE4-201ENST00000324444 DPM2O94777 84 aa12.43□□□□□ -0.42
SYNE4-201ENST00000324444 CEMP1Q6PRD7 247 aaPredicted RBP12.43□□□□□ -0.42
SYNE4-201ENST00000324444 ZNF664Q8N3J9 261 aa12.43□□□□□ -0.42
SYNE4-201ENST00000324444 HYDINQ4G0P3 5121 aa12.42□□□□□ -0.42
SYNE4-201ENST00000324444 HSBP1L1C9JCN9 74 aa12.42□□□□□ -0.42
SYNE4-201ENST00000324444 SEC11AP67812 179 aa12.42□□□□□ -0.42
SYNE4-201ENST00000324444 LINC00518Q8N0U6 118 aa12.42□□□□□ -0.42
SYNE4-201ENST00000324444 Q8N976 141 aa12.42□□□□□ -0.42
SYNE4-201ENST00000324444 C12orf57Q99622 126 aa12.42□□□□□ -0.42
SYNE4-201ENST00000324444 CDC42SE2Q9NRR3 84 aa12.42□□□□□ -0.42
SYNE4-201ENST00000324444 CCL18P55774 89 aa12.41□□□□□ -0.42
SYNE4-201ENST00000324444 IGKCP01834 107 aa12.4□□□□□ -0.42
SYNE4-201ENST00000324444 CCL25O15444 150 aa12.39□□□□□ -0.43
SYNE4-201ENST00000324444 Q6ZUT4 128 aa12.39□□□□□ -0.43
SYNE4-201ENST00000324444 VAMP8Q9BV40 100 aa12.39□□□□□ -0.43
SYNE4-201ENST00000324444 MRPL35Q9NZE8 188 aaKnown RBP12.39□□□□□ -0.43
SYNE4-201ENST00000324444 RBX1P62877 108 aa12.38□□□□□ -0.43
SYNE4-201ENST00000324444 ESRGQ1W209 222 aa12.38□□□□□ -0.43
SYNE4-201ENST00000324444 OPRPNQ99935 248 aaPredicted RBP12.38□□□□□ -0.43
SYNE4-201ENST00000324444 TRAV9-2A0A087WT02 112 aa12.37□□□□□ -0.43
SYNE4-201ENST00000324444 LINC00476Q8WZB0 136 aa12.37□□□□□ -0.43
SYNE4-201ENST00000324444 NFE4Q86UQ8 179 aa12.36□□□□□ -0.43
SYNE4-201ENST00000324444 EPPK1P58107 5090 aaKnown RBP12.36□□□□□ -0.43
SYNE4-201ENST00000324444 TINCRA0A1B0GVN0 87 aa12.35□□□□□ -0.43
SYNE4-201ENST00000324444 LY6G6CO95867 125 aa12.35□□□□□ -0.43
SYNE4-201ENST00000324444 IGLC3P0DOY3 106 aa12.35□□□□□ -0.43
SYNE4-201ENST00000324444 FAM104AQ969W3 186 aa12.35□□□□□ -0.43
SYNE4-201ENST00000324444 PMCHL2Q9BQD1 86 aa12.35□□□□□ -0.43
SYNE4-201ENST00000324444 MRPS16Q9Y3D3 137 aaKnown RBP12.35□□□□□ -0.43
SYNE4-201ENST00000324444 UBE2D1P51668 147 aa12.34□□□□□ -0.43
SYNE4-201ENST00000324444 MPV17L2Q567V2 206 aa12.34□□□□□ -0.43
SYNE4-201ENST00000324444 FAM19A3Q7Z5A8 133 aa12.34□□□□□ -0.43
SYNE4-201ENST00000324444 GEMIN7Q9H840 131 aaKnown RBP12.34□□□□□ -0.43
SYNE4-201ENST00000324444 IGLV4-60A0A075B6I1 120 aa12.33□□□□□ -0.44
SYNE4-201ENST00000324444 HERVK_113P61574 105 aa12.33□□□□□ -0.44
SYNE4-201ENST00000324444 HERVK_113P63121 156 aa12.33□□□□□ -0.44
SYNE4-201ENST00000324444 ANGP03950 147 aaKnown RBP12.32□□□□□ -0.44
SYNE4-201ENST00000324444 SS18Q15532 418 aa12.32□□□□□ -0.44
SYNE4-201ENST00000324444 ATOH7Q8N100 152 aa12.32□□□□□ -0.44
SYNE4-201ENST00000324444 UPK3BQ9BT76 320 aa12.32□□□□□ -0.44
SYNE4-201ENST00000324444 CHAC1Q9BUX1 264 aa12.32□□□□□ -0.44
SYNE4-201ENST00000324444 IGLV4-69A0A075B6H9 119 aa12.31□□□□□ -0.44
SYNE4-201ENST00000324444 K7EP13 123 aa12.31□□□□□ -0.44
SYNE4-201ENST00000324444 RNASE13Q5GAN3 156 aaKnown RBP12.31□□□□□ -0.44
SYNE4-201ENST00000324444 ZC2HC1BQ5TFG8 222 aa12.31□□□□□ -0.44
SYNE4-201ENST00000324444 APLNQ9ULZ1 77 aa12.31□□□□□ -0.44
SYNE4-201ENST00000324444 TRAV13-1A0A0B4J241 112 aa12.3□□□□□ -0.44
SYNE4-201ENST00000324444 C11orf86A6NJI1 115 aa12.3□□□□□ -0.44
SYNE4-201ENST00000324444 H3BRM9 83 aa12.3□□□□□ -0.44
SYNE4-201ENST00000324444 LINC01556Q5JQF7 62 aa12.3□□□□□ -0.44
SYNE4-201ENST00000324444 A0A0J9YXV3 536 aa12.3□□□□□ -0.44
SYNE4-201ENST00000324444 SPATA45Q537H7 98 aa12.3□□□□□ -0.44
SYNE4-201ENST00000324444 TMEM170BQ5T4T1 132 aa12.3□□□□□ -0.44
SYNE4-201ENST00000324444 PAM16Q9Y3D7 125 aa12.3□□□□□ -0.44
SYNE4-201ENST00000324444 BIRC6Q9NR09 4857 aa12.29□□□□□ -0.44
SYNE4-201ENST00000324444 SIVA1O15304 175 aa12.29□□□□□ -0.44
SYNE4-201ENST00000324444 CRPP02741 224 aa12.29□□□□□ -0.44
SYNE4-201ENST00000324444 DNAH10OSP0CZ25 163 aa12.29□□□□□ -0.44
SYNE4-201ENST00000324444 WFDC10BQ8IUB3 73 aa12.29□□□□□ -0.44
SYNE4-201ENST00000324444 LINC00588Q9Y4M8 146 aa12.29□□□□□ -0.44
SYNE4-201ENST00000324444 LINC00959A0A1B0GUT2 108 aa12.28□□□□□ -0.44
SYNE4-201ENST00000324444 TSTD3H0UI37 97 aa12.28□□□□□ -0.44
SYNE4-201ENST00000324444 REG3AQ06141 175 aa12.28□□□□□ -0.44
SYNE4-201ENST00000324444 LINC00269Q8N2A0 174 aa12.28□□□□□ -0.44
SYNE4-201ENST00000324444 C10orf126Q8N4M7 172 aa12.28□□□□□ -0.44
SYNE4-201ENST00000324444 TRAV8-4A0A0B4J246 113 aa12.27□□□□□ -0.45
SYNE4-201ENST00000324444 LINC00242Q5T6M2 205 aa12.27□□□□□ -0.45
SYNE4-201ENST00000324444 CDPF1Q6NVV7 123 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms