RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 Q5VSD8 79 aa18.99■□□□□ 0.63
SYNGR1-202ENST00000318801 UQCC3Q6UW78 93 aa18.99■□□□□ 0.63
SYNGR1-202ENST00000318801 MRPL52Q86TS9 123 aaKnown RBP18.99■□□□□ 0.63
SYNGR1-202ENST00000318801 TMEM18Q96B42 140 aa18.99■□□□□ 0.63
SYNGR1-202ENST00000318801 CHCHD10Q8WYQ3 142 aaPredicted RBP18.97■□□□□ 0.63
SYNGR1-202ENST00000318801 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.96■□□□□ 0.63
SYNGR1-202ENST00000318801 TNFRSF6BO95407 300 aa18.96■□□□□ 0.63
SYNGR1-202ENST00000318801 D6R8Y8 96 aa18.95■□□□□ 0.62
SYNGR1-202ENST00000318801 RPL32P62910 135 aaKnown RBP18.95■□□□□ 0.62
SYNGR1-202ENST00000318801 PHOX2AO14813 284 aa18.94■□□□□ 0.62
SYNGR1-202ENST00000318801 SS18Q15532 418 aa18.94■□□□□ 0.62
SYNGR1-202ENST00000318801 ZNF664Q8N3J9 261 aa18.94■□□□□ 0.62
SYNGR1-202ENST00000318801 C9orf163Q8N9P6 203 aa18.94■□□□□ 0.62
SYNGR1-202ENST00000318801 ORMDL3Q8N138 153 aa18.93■□□□□ 0.62
SYNGR1-202ENST00000318801 CHAC1Q9BUX1 264 aa18.93■□□□□ 0.62
SYNGR1-202ENST00000318801 CDC42SE2Q9NRR3 84 aa18.93■□□□□ 0.62
SYNGR1-202ENST00000318801 IFITM2Q01629 132 aa18.93■□□□□ 0.62
SYNGR1-202ENST00000318801 CSDC2Q9Y534 153 aaKnown RBP18.93■□□□□ 0.62
SYNGR1-202ENST00000318801 ABCA13Q86UQ4 5058 aa18.92■□□□□ 0.62
SYNGR1-202ENST00000318801 LINC00959A0A1B0GUT2 108 aa18.91■□□□□ 0.62
SYNGR1-202ENST00000318801 CNBPP62633 177 aaKnown RBP18.91■□□□□ 0.62
SYNGR1-202ENST00000318801 TMEM136Q6ZRR5 245 aa18.91■□□□□ 0.62
SYNGR1-202ENST00000318801 SMIM2Q9BVW6 85 aa18.91■□□□□ 0.62
SYNGR1-202ENST00000318801 XCL1P47992 114 aa18.9■□□□□ 0.62
SYNGR1-202ENST00000318801 TMEM218A2RU14 115 aa18.89■□□□□ 0.61
SYNGR1-202ENST00000318801 CCL25O15444 150 aa18.88■□□□□ 0.61
SYNGR1-202ENST00000318801 RAB5AP20339 215 aa18.88■□□□□ 0.61
SYNGR1-202ENST00000318801 SCXQ7RTU7 201 aa18.88■□□□□ 0.61
SYNGR1-202ENST00000318801 PRELID3AQ96N28 172 aa18.88■□□□□ 0.61
SYNGR1-202ENST00000318801 NPYP01303 97 aa18.87■□□□□ 0.61
SYNGR1-202ENST00000318801 PLA2G1BP04054 148 aaKnown RBP18.87■□□□□ 0.61
SYNGR1-202ENST00000318801 INAFM2P0DMQ5 153 aa18.87■□□□□ 0.61
SYNGR1-202ENST00000318801 IMMP2LQ96T52 175 aa18.87■□□□□ 0.61
SYNGR1-202ENST00000318801 TIMM21Q9BVV7 248 aa18.87■□□□□ 0.61
SYNGR1-202ENST00000318801 UBE2D4Q9Y2X8 147 aa18.87■□□□□ 0.61
SYNGR1-202ENST00000318801 LAMTOR2Q9Y2Q5 125 aa18.86■□□□□ 0.61
SYNGR1-202ENST00000318801 SRRM2Q9UQ35 2752 aaKnown RBP18.86■□□□□ 0.61
SYNGR1-202ENST00000318801 IGHV3-64A0A075B6Q5 118 aa18.85■□□□□ 0.61
SYNGR1-202ENST00000318801 C1orf196B1AJZ1 125 aa18.85■□□□□ 0.61
SYNGR1-202ENST00000318801 CTDSP1Q9GZU7 261 aa18.85■□□□□ 0.61
SYNGR1-202ENST00000318801 FOXI1Q12951 378 aa18.84■□□□□ 0.61
SYNGR1-202ENST00000318801 CD164L2Q6UWJ8 174 aa18.83■□□□□ 0.61
SYNGR1-202ENST00000318801 C15orf56Q8N910 161 aa18.83■□□□□ 0.61
SYNGR1-202ENST00000318801 SEC11CQ9BY50 192 aa18.83■□□□□ 0.61
SYNGR1-202ENST00000318801 LINC00528Q8N1L1 170 aa18.82■□□□□ 0.6
SYNGR1-202ENST00000318801 CIRBP-AS1Q8TBR5 109 aa18.82■□□□□ 0.6
SYNGR1-202ENST00000318801 SDIM1Q6ZPB5 146 aa18.81■□□□□ 0.6
SYNGR1-202ENST00000318801 HIGD2BQ4VC39 106 aa18.81■□□□□ 0.6
SYNGR1-202ENST00000318801 COMMD7Q86VX2 200 aa18.81■□□□□ 0.6
SYNGR1-202ENST00000318801 DPH3Q96FX2 82 aa18.81■□□□□ 0.6
SYNGR1-202ENST00000318801 IGHV1-58A0A0C4DH39 117 aa18.8■□□□□ 0.6
SYNGR1-202ENST00000318801 MAP1LC3AQ9H492 121 aa18.8■□□□□ 0.6
SYNGR1-202ENST00000318801 SPANXA1Q9NS26 97 aa18.8■□□□□ 0.6
SYNGR1-202ENST00000318801 GVQW2A0A096LPI5 108 aaPredicted RBP18.79■□□□□ 0.6
SYNGR1-202ENST00000318801 ADCYAP1P18509 176 aa18.79■□□□□ 0.6
SYNGR1-202ENST00000318801 MALP21145 153 aa18.78■□□□□ 0.6
SYNGR1-202ENST00000318801 TRAV9-1A0A075B6T8 112 aa18.77■□□□□ 0.6
SYNGR1-202ENST00000318801 TRAV13-1A0A0B4J241 112 aa18.77■□□□□ 0.6
SYNGR1-202ENST00000318801 S100PP25815 95 aa18.77■□□□□ 0.6
SYNGR1-202ENST00000318801 RPL39P62891 51 aaKnown RBP18.77■□□□□ 0.6
SYNGR1-202ENST00000318801 PRSS47A8MTI9 375 aa18.76■□□□□ 0.59
SYNGR1-202ENST00000318801 SLPIP03973 132 aa18.76■□□□□ 0.59
SYNGR1-202ENST00000318801 RNASE13Q5GAN3 156 aaKnown RBP18.76■□□□□ 0.59
SYNGR1-202ENST00000318801 DNAH8Q96JB1 4490 aa18.75■□□□□ 0.59
SYNGR1-202ENST00000318801 LOC389332A0A1B0GUA5 103 aa18.75■□□□□ 0.59
SYNGR1-202ENST00000318801 ZNF561-AS1K7EIQ3 104 aa18.75■□□□□ 0.59
SYNGR1-202ENST00000318801 COX7A2LO14548 114 aa18.75■□□□□ 0.59
SYNGR1-202ENST00000318801 FAT1Q14517 4588 aa18.74■□□□□ 0.59
SYNGR1-202ENST00000318801 Q6ZUT4 128 aa18.74■□□□□ 0.59
SYNGR1-202ENST00000318801 PKIGQ9Y2B9 76 aa18.74■□□□□ 0.59
SYNGR1-202ENST00000318801 IFI27P40305 119 aaPredicted RBP18.73■□□□□ 0.59
SYNGR1-202ENST00000318801 MRPS36P82909 103 aaKnown RBP18.72■□□□□ 0.59
SYNGR1-202ENST00000318801 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.71■□□□□ 0.59
SYNGR1-202ENST00000318801 Q8N8P6 123 aa18.7■□□□□ 0.58
SYNGR1-202ENST00000318801 K7EMI3 77 aa18.69■□□□□ 0.58
SYNGR1-202ENST00000318801 APOMO95445 188 aa18.69■□□□□ 0.58
SYNGR1-202ENST00000318801 VPS13BQ7Z7G8 4022 aa18.68■□□□□ 0.58
SYNGR1-202ENST00000318801 G0S2P27469 103 aa18.68■□□□□ 0.58
SYNGR1-202ENST00000318801 COX6A2Q02221 97 aa18.68■□□□□ 0.58
SYNGR1-202ENST00000318801 ORMDL2Q53FV1 153 aa18.68■□□□□ 0.58
SYNGR1-202ENST00000318801 NXT2Q9NPJ8 142 aaKnown RBP18.68■□□□□ 0.58
SYNGR1-202ENST00000318801 PYGO1Q9Y3Y4 419 aa18.68■□□□□ 0.58
SYNGR1-202ENST00000318801 IFITM10A6NMD0 228 aa18.67■□□□□ 0.58
SYNGR1-202ENST00000318801 CIRBPQ14011 172 aaKnown RBP18.66■□□□□ 0.58
SYNGR1-202ENST00000318801 CYSLTR1Q9Y271 337 aa18.66■□□□□ 0.58
SYNGR1-202ENST00000318801 RHEBQ15382 184 aa18.65■□□□□ 0.58
SYNGR1-202ENST00000318801 COX19Q49B96 90 aa18.65■□□□□ 0.58
SYNGR1-202ENST00000318801 CARD19Q96LW7 228 aa18.65■□□□□ 0.58
SYNGR1-202ENST00000318801 OPRPNQ99935 248 aaPredicted RBP18.65■□□□□ 0.58
SYNGR1-202ENST00000318801 SYCNQ0VAF6 134 aa18.64■□□□□ 0.57
SYNGR1-202ENST00000318801 C10orf91Q5T1B1 145 aa18.64■□□□□ 0.57
SYNGR1-202ENST00000318801 C5orf38Q86SI9 138 aa18.64■□□□□ 0.57
SYNGR1-202ENST00000318801 LINC00526Q96FQ7 95 aa18.63■□□□□ 0.57
SYNGR1-202ENST00000318801 GNB1LQ9BYB4 327 aa18.63■□□□□ 0.57
SYNGR1-202ENST00000318801 RPS10P5Q9NQ39 176 aa18.63■□□□□ 0.57
SYNGR1-202ENST00000318801 LINC00474Q9P2X8 69 aa18.63■□□□□ 0.57
SYNGR1-202ENST00000318801 CARHSP1Q9Y2V2 147 aaKnown RBP18.63■□□□□ 0.57
SYNGR1-202ENST00000318801 FLG2Q5D862 2391 aaPredicted RBP18.63■□□□□ 0.57
SYNGR1-202ENST00000318801 PANO1I0J062 215 aa18.62■□□□□ 0.57
SYNGR1-202ENST00000318801 Q6ZN92 141 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms