RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 RHPN1-AS1Q9BWJ2 59 aa7.64□□□□□ -1.19
APOBEC3F-201ENST00000308521 ZNF876PQ49A33 203 aa7.63□□□□□ -1.19
APOBEC3F-201ENST00000308521 AMELXQ99217 191 aa7.63□□□□□ -1.19
APOBEC3F-201ENST00000308521 TRBV6-5A0A0K0K1A5 114 aa7.63□□□□□ -1.19
APOBEC3F-201ENST00000308521 CXCL5P42830 114 aa7.63□□□□□ -1.19
APOBEC3F-201ENST00000308521 TEP1Q99973 2627 aaKnown RBP7.63□□□□□ -1.19
APOBEC3F-201ENST00000308521 C2CD3Q4AC94 2353 aa7.63□□□□□ -1.19
APOBEC3F-201ENST00000308521 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.62□□□□□ -1.19
APOBEC3F-201ENST00000308521 TSPEAR-AS2P59090 65 aa7.62□□□□□ -1.19
APOBEC3F-201ENST00000308521 F8P00451 2351 aa7.62□□□□□ -1.19
APOBEC3F-201ENST00000308521 TRBV30A0A0K0K1B3 111 aa7.62□□□□□ -1.19
APOBEC3F-201ENST00000308521 IGHV3-33P01772 117 aa7.62□□□□□ -1.19
APOBEC3F-201ENST00000308521 SUMO4Q6EEV6 95 aa7.62□□□□□ -1.19
APOBEC3F-201ENST00000308521 DAZ1Q9NQZ3 744 aaKnown RBP7.62□□□□□ -1.19
APOBEC3F-201ENST00000308521 ZNF580Q9UK33 172 aa7.62□□□□□ -1.19
APOBEC3F-201ENST00000308521 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 A0A1W2PRX2 142 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 KLLNB2CW77 178 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 F5H768 121 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 J3QQQ9 107 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 ELANEP08246 267 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 COX7CP15954 63 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 SLURP1P55000 103 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 SFTA2Q6UW10 78 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 HOXD3P31249 432 aaPredicted RBP7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 ZNF56Q15929 161 aa7.61□□□□□ -1.19
APOBEC3F-201ENST00000308521 TEX49A0A1B0GTD5 131 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 FAM236AA0A1B0GUQ0 79 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 FAM236BA0A1B0GV22 79 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 F8WDY8 70 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 LEPROTO15243 131 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 TMEM258P61165 79 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 RPL39P62891 51 aaKnown RBP7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 Q8N2B8 174 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 UBE2E2Q96LR5 201 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 NOTCH3Q9UM47 2321 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 SDHAF1A6NFY7 115 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 INAFM1C9JVW0 142 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 F6UB75 175 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 GAGE2AQ6NT46 116 aa7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 TMEM263Q8WUH6 116 aaKnown RBP7.6□□□□□ -1.19
APOBEC3F-201ENST00000308521 RHOHQ15669 191 aa7.59□□□□□ -1.19
APOBEC3F-201ENST00000308521 KIR2DL5BQ8NHK3 375 aa7.59□□□□□ -1.19
APOBEC3F-201ENST00000308521 BAHCC1Q9P281 2608 aa7.59□□□□□ -1.19
APOBEC3F-201ENST00000308521 TRGV11A0A075B6L2 103 aa7.59□□□□□ -1.19
APOBEC3F-201ENST00000308521 NSUN5P1Q3KNT7 163 aa7.59□□□□□ -1.19
APOBEC3F-201ENST00000308521 LINC00643Q86TS7 51 aa7.59□□□□□ -1.19
APOBEC3F-201ENST00000308521 TMEM86BQ8N661 226 aa7.59□□□□□ -1.19
APOBEC3F-201ENST00000308521 A0A0J9YX75 114 aa7.58□□□□□ -1.2
APOBEC3F-201ENST00000308521 TMEM223A0PJW6 202 aa7.58□□□□□ -1.2
APOBEC3F-201ENST00000308521 TMEM89A2RUT3 159 aa7.58□□□□□ -1.2
APOBEC3F-201ENST00000308521 C2orf82Q6UX34 121 aa7.58□□□□□ -1.2
APOBEC3F-201ENST00000308521 TRPT1Q86TN4 253 aaKnown RBP7.58□□□□□ -1.2
APOBEC3F-201ENST00000308521 MUC4Q99102 2169 aa7.58□□□□□ -1.2
APOBEC3F-201ENST00000308521 CD28P10747 220 aa7.58□□□□□ -1.2
APOBEC3F-201ENST00000308521 JPT2Q9H910 190 aa7.58□□□□□ -1.2
APOBEC3F-201ENST00000308521 TENM1Q9UKZ4 2725 aa7.58□□□□□ -1.2
APOBEC3F-201ENST00000308521 LINC00528Q8N1L1 170 aa7.57□□□□□ -1.2
APOBEC3F-201ENST00000308521 LINC01006Q8NI28 216 aa7.57□□□□□ -1.2
APOBEC3F-201ENST00000308521 C9orf85Q96MD7 179 aa7.57□□□□□ -1.2
APOBEC3F-201ENST00000308521 F5H697 171 aa7.57□□□□□ -1.2
APOBEC3F-201ENST00000308521 ATOX1O00244 68 aa7.57□□□□□ -1.2
APOBEC3F-201ENST00000308521 RNF152Q8N8N0 203 aa7.57□□□□□ -1.2
APOBEC3F-201ENST00000308521 EIF4EBP3O60516 100 aaPredicted RBP7.56□□□□□ -1.2
APOBEC3F-201ENST00000308521 ATRQ13535 2644 aa7.56□□□□□ -1.2
APOBEC3F-201ENST00000308521 VWFP04275 2813 aa7.56□□□□□ -1.2
APOBEC3F-201ENST00000308521 A0A087WWL8 130 aa7.56□□□□□ -1.2
APOBEC3F-201ENST00000308521 TRACP01848 142 aa7.56□□□□□ -1.2
APOBEC3F-201ENST00000308521 COX6CP09669 75 aa7.56□□□□□ -1.2
APOBEC3F-201ENST00000308521 SDIM1Q6ZPB5 146 aa7.56□□□□□ -1.2
APOBEC3F-201ENST00000308521 EDA2RQ9HAV5 297 aa7.56□□□□□ -1.2
APOBEC3F-201ENST00000308521 K7EMT4 169 aa7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 M0QY20 66 aa7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 RNASE1P07998 156 aaKnown RBP7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 C5orf38Q86SI9 138 aa7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 ZNF256Q9Y2P7 627 aaPredicted RBP7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 IGHV3-16A0A0C4DH30 117 aa7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 ZNF22P17026 224 aaPredicted RBP7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 HILS1P60008 231 aa7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 MUSTN1Q8IVN3 82 aa7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 C3orf56Q8N813 242 aa7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 IGKV3-20P01619 116 aa7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 C20orf203Q8NBC4 194 aa7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 DCANP1Q8TF63 244 aa7.55□□□□□ -1.2
APOBEC3F-201ENST00000308521 H7C423 109 aa7.54□□□□□ -1.2
APOBEC3F-201ENST00000308521 HIST1H4AP62805 103 aaKnown RBP7.54□□□□□ -1.2
APOBEC3F-201ENST00000308521 C4orf3Q8WVX3 66 aa7.54□□□□□ -1.2
APOBEC3F-201ENST00000308521 DPH3Q96FX2 82 aa7.54□□□□□ -1.2
APOBEC3F-201ENST00000308521 C2orf48Q96LS8 159 aa7.54□□□□□ -1.2
APOBEC3F-201ENST00000308521 TRAV12-3A0A0B4J271 114 aa7.54□□□□□ -1.2
APOBEC3F-201ENST00000308521 TRRAPQ9Y4A5 3859 aa7.54□□□□□ -1.2
APOBEC3F-201ENST00000308521 DEFB104AQ8WTQ1 72 aa7.53□□□□□ -1.2
APOBEC3F-201ENST00000308521 I3L3M4 83 aa7.53□□□□□ -1.2
APOBEC3F-201ENST00000308521 OPRPNQ99935 248 aaPredicted RBP7.53□□□□□ -1.2
APOBEC3F-201ENST00000308521 IGLV4-3A0A075B6K6 122 aa7.52□□□□□ -1.21
APOBEC3F-201ENST00000308521 A0A0J9YXY3 114 aa7.52□□□□□ -1.21
APOBEC3F-201ENST00000308521 Q1RN00 199 aa7.52□□□□□ -1.21
APOBEC3F-201ENST00000308521 FAM74A4Q5TZK3 123 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms