RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 DEFB136Q30KP8 78 aa11.94□□□□□ -0.5
CCDC8-201ENST00000307522 SDIM1Q6ZPB5 146 aa11.94□□□□□ -0.5
CCDC8-201ENST00000307522 LITAFQ99732 161 aa11.94□□□□□ -0.5
CCDC8-201ENST00000307522 LST1O00453 97 aa11.93□□□□□ -0.5
CCDC8-201ENST00000307522 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
CCDC8-201ENST00000307522 TMEM141Q96I45 108 aa11.93□□□□□ -0.5
CCDC8-201ENST00000307522 Q9UF83 564 aa11.93□□□□□ -0.5
CCDC8-201ENST00000307522 AKAP9Q99996 3911 aa11.93□□□□□ -0.5
CCDC8-201ENST00000307522 OTOGQ6ZRI0 2925 aa11.93□□□□□ -0.5
CCDC8-201ENST00000307522 TIMM17AQ99595 171 aa11.93□□□□□ -0.5
CCDC8-201ENST00000307522 IGKV3D-7A0A0C4DH55 119 aa11.92□□□□□ -0.5
CCDC8-201ENST00000307522 C4orf26Q17RF5 130 aa11.92□□□□□ -0.5
CCDC8-201ENST00000307522 Q9HAA7 133 aa11.92□□□□□ -0.5
CCDC8-201ENST00000307522 KIF25-AS1Q9Y6Z4 181 aa11.92□□□□□ -0.5
CCDC8-201ENST00000307522 A0A087WVE0 104 aa11.92□□□□□ -0.5
CCDC8-201ENST00000307522 H3BT86 120 aa11.92□□□□□ -0.5
CCDC8-201ENST00000307522 PRM2P04554 102 aa11.92□□□□□ -0.5
CCDC8-201ENST00000307522 CD28P10747 220 aa11.92□□□□□ -0.5
CCDC8-201ENST00000307522 J3KT08 172 aa11.91□□□□□ -0.5
CCDC8-201ENST00000307522 PROK1P58294 105 aa11.91□□□□□ -0.5
CCDC8-201ENST00000307522 C18orf65Q6ZTR6 163 aa11.91□□□□□ -0.5
CCDC8-201ENST00000307522 RNF152Q8N8N0 203 aa11.91□□□□□ -0.5
CCDC8-201ENST00000307522 DAZ2Q13117 558 aaKnown RBP11.91□□□□□ -0.5
CCDC8-201ENST00000307522 DAZ4Q86SG3 579 aaKnown RBP11.91□□□□□ -0.5
CCDC8-201ENST00000307522 Q8N2B8 174 aa11.91□□□□□ -0.5
CCDC8-201ENST00000307522 DAZ1Q9NQZ3 744 aaKnown RBP11.91□□□□□ -0.5
CCDC8-201ENST00000307522 DAZ3Q9NR90 486 aaKnown RBP11.91□□□□□ -0.5
CCDC8-201ENST00000307522 IGLV4-3A0A075B6K6 122 aa11.9□□□□□ -0.5
CCDC8-201ENST00000307522 HRCT1Q6UXD1 115 aa11.9□□□□□ -0.5
CCDC8-201ENST00000307522 UQCRQO14949 82 aa11.9□□□□□ -0.51
CCDC8-201ENST00000307522 NBEAL2Q6ZNJ1 2754 aa11.89□□□□□ -0.51
CCDC8-201ENST00000307522 KNCNA6PVL3 124 aa11.89□□□□□ -0.51
CCDC8-201ENST00000307522 TMEM61Q8N0U2 210 aa11.88□□□□□ -0.51
CCDC8-201ENST00000307522 OXTP01178 125 aa11.88□□□□□ -0.51
CCDC8-201ENST00000307522 LINC01356Q8N9X3 169 aa11.87□□□□□ -0.51
CCDC8-201ENST00000307522 LINC00526Q96FQ7 95 aa11.87□□□□□ -0.51
CCDC8-201ENST00000307522 IGHV3-38A0A0C4DH36 116 aa11.86□□□□□ -0.51
CCDC8-201ENST00000307522 A0A1W2PRX2 142 aa11.86□□□□□ -0.51
CCDC8-201ENST00000307522 A6NDX4 124 aa11.86□□□□□ -0.51
CCDC8-201ENST00000307522 PDZD2O15018 2839 aa11.86□□□□□ -0.51
CCDC8-201ENST00000307522 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.85□□□□□ -0.51
CCDC8-201ENST00000307522 IGKV2-29A2NJV5 120 aaPredicted RBP11.85□□□□□ -0.51
CCDC8-201ENST00000307522 PPP1R17O96001 155 aa11.85□□□□□ -0.51
CCDC8-201ENST00000307522 MIAQ16674 131 aa11.85□□□□□ -0.51
CCDC8-201ENST00000307522 C20orf203Q8NBC4 194 aa11.85□□□□□ -0.51
CCDC8-201ENST00000307522 CITED2Q99967 270 aaPredicted RBP11.85□□□□□ -0.51
CCDC8-201ENST00000307522 TRBV27A0A0K0K1C4 114 aa11.85□□□□□ -0.51
CCDC8-201ENST00000307522 FAM240AA0A1B0GVK7 77 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 TIRAPP58753 221 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 BAALC-AS2P0C853 105 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 SYNJ2BPP57105 145 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 C9orf139Q6ZV77 190 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 SMR3AQ99954 134 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 IGHV4OR15-8A0A075B7B6 117 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 A0A087WW49 117 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 TRBV7-1A0A0A6YYK4 115 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 A0A1B0GX51 115 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 M0QY20 66 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 COX7CP15954 63 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 C9orf129Q5T035 196 aaKnown RBP11.84□□□□□ -0.51
CCDC8-201ENST00000307522 FAM218AQ96MZ4 157 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 ATRQ13535 2644 aa11.84□□□□□ -0.51
CCDC8-201ENST00000307522 IGHV4-31P0DP07 118 aa11.83□□□□□ -0.52
CCDC8-201ENST00000307522 RHPN1-AS1Q9BWJ2 59 aa11.83□□□□□ -0.52
CCDC8-201ENST00000307522 DEFB113Q30KQ7 82 aa11.83□□□□□ -0.52
CCDC8-201ENST00000307522 IGHG2P01859 326 aa11.82□□□□□ -0.52
CCDC8-201ENST00000307522 LINC00643Q86TS7 51 aa11.82□□□□□ -0.52
CCDC8-201ENST00000307522 VWFP04275 2813 aa11.82□□□□□ -0.52
CCDC8-201ENST00000307522 DCANP1Q8TF63 244 aa11.82□□□□□ -0.52
CCDC8-201ENST00000307522 C2orf48Q96LS8 159 aa11.82□□□□□ -0.52
CCDC8-201ENST00000307522 CR1P17927 2039 aa11.82□□□□□ -0.52
CCDC8-201ENST00000307522 OVOL1O14753 267 aa11.81□□□□□ -0.52
CCDC8-201ENST00000307522 IGHV1-58A0A0C4DH39 117 aa11.8□□□□□ -0.52
CCDC8-201ENST00000307522 WFDC9Q8NEX5 89 aa11.8□□□□□ -0.52
CCDC8-201ENST00000307522 CDKN2A-AS1Q9UH64 79 aa11.8□□□□□ -0.52
CCDC8-201ENST00000307522 TRACP01848 142 aa11.8□□□□□ -0.52
CCDC8-201ENST00000307522 SPINK13Q1W4C9 94 aa11.8□□□□□ -0.52
CCDC8-201ENST00000307522 FAM104AQ969W3 186 aa11.8□□□□□ -0.52
CCDC8-201ENST00000307522 C14orf132Q9NPU4 83 aa11.8□□□□□ -0.52
CCDC8-201ENST00000307522 A0A096LNT2 108 aa11.79□□□□□ -0.52
CCDC8-201ENST00000307522 OR13C6PQ8NH95 151 aa11.79□□□□□ -0.52
CCDC8-201ENST00000307522 DEFB121Q5J5C9 76 aa11.79□□□□□ -0.52
CCDC8-201ENST00000307522 LRRC75A-AS1Q8N1F1 130 aa11.79□□□□□ -0.52
CCDC8-201ENST00000307522 MRPL53Q96EL3 112 aaKnown RBP11.79□□□□□ -0.52
CCDC8-201ENST00000307522 VSIG2Q96IQ7 327 aa11.79□□□□□ -0.52
CCDC8-201ENST00000307522 SPANXA1Q9NS26 97 aa11.79□□□□□ -0.52
CCDC8-201ENST00000307522 PEMTQ9UBM1 199 aa11.79□□□□□ -0.52
CCDC8-201ENST00000307522 PIK3CD-AS1Q5SR53 167 aa11.79□□□□□ -0.52
CCDC8-201ENST00000307522 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.78□□□□□ -0.52
CCDC8-201ENST00000307522 Q9H8V8 135 aa11.78□□□□□ -0.52
CCDC8-201ENST00000307522 TRAV25A0A0B4J276 109 aa11.77□□□□□ -0.52
CCDC8-201ENST00000307522 FAM19A4Q96LR4 140 aa11.77□□□□□ -0.52
CCDC8-201ENST00000307522 F5H768 121 aa11.77□□□□□ -0.53
CCDC8-201ENST00000307522 SLURP1P55000 103 aa11.77□□□□□ -0.53
CCDC8-201ENST00000307522 SOSTDC1Q6X4U4 206 aa11.77□□□□□ -0.53
CCDC8-201ENST00000307522 U3KQE9 123 aa11.77□□□□□ -0.53
CCDC8-201ENST00000307522 KMT2BQ9UMN6 2715 aaPredicted RBP11.77□□□□□ -0.53
CCDC8-201ENST00000307522 TENM1Q9UKZ4 2725 aa11.77□□□□□ -0.53
CCDC8-201ENST00000307522 DPH3Q96FX2 82 aa11.77□□□□□ -0.53
CCDC8-201ENST00000307522 IGHV3-16A0A0C4DH30 117 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms