RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 CHCHD5Q9BSY4 110 aa12.19□□□□□ -0.46
KRT28-201ENST00000306658 NHLRC4P0CG21 123 aaPredicted RBP12.18□□□□□ -0.46
KRT28-201ENST00000306658 MAJINQ3KP22 176 aa12.18□□□□□ -0.46
KRT28-201ENST00000306658 TSTD3H0UI37 97 aa12.17□□□□□ -0.46
KRT28-201ENST00000306658 PKIAP61925 76 aa12.17□□□□□ -0.46
KRT28-201ENST00000306658 TMEM101Q96IK0 257 aa12.17□□□□□ -0.46
KRT28-201ENST00000306658 AMELXQ99217 191 aa12.17□□□□□ -0.46
KRT28-201ENST00000306658 HUWE1Q7Z6Z7 4374 aaKnown RBP12.17□□□□□ -0.46
KRT28-201ENST00000306658 TRAV10A0A0B4J240 114 aa12.16□□□□□ -0.46
KRT28-201ENST00000306658 hDV102S1A0JD36 115 aa12.16□□□□□ -0.46
KRT28-201ENST00000306658 ZNF25P17030 456 aaPredicted RBP12.16□□□□□ -0.46
KRT28-201ENST00000306658 DEFA6Q01524 100 aa12.16□□□□□ -0.46
KRT28-201ENST00000306658 ZC2HC1BQ5TFG8 222 aa12.16□□□□□ -0.46
KRT28-201ENST00000306658 OR5A1Q8NGJ0 315 aa12.16□□□□□ -0.46
KRT28-201ENST00000306658 FAM104AQ969W3 186 aa12.16□□□□□ -0.46
KRT28-201ENST00000306658 GAGE6Q13070 117 aa12.15□□□□□ -0.46
KRT28-201ENST00000306658 Q6ZUT4 128 aa12.15□□□□□ -0.46
KRT28-201ENST00000306658 C2orf88Q9BSF0 95 aa12.15□□□□□ -0.46
KRT28-201ENST00000306658 PRO1933Q9H354 126 aa12.15□□□□□ -0.46
KRT28-201ENST00000306658 PCP4L1A6NKN8 68 aa12.13□□□□□ -0.47
KRT28-201ENST00000306658 RNASE13Q5GAN3 156 aaKnown RBP12.13□□□□□ -0.47
KRT28-201ENST00000306658 CDC42SE2Q9NRR3 84 aa12.13□□□□□ -0.47
KRT28-201ENST00000306658 IGLV4-69A0A075B6H9 119 aa12.13□□□□□ -0.47
KRT28-201ENST00000306658 STPG4Q8N801 248 aa12.13□□□□□ -0.47
KRT28-201ENST00000306658 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
KRT28-201ENST00000306658 LELP1Q5T871 98 aa12.12□□□□□ -0.47
KRT28-201ENST00000306658 TIRAPP58753 221 aa12.11□□□□□ -0.47
KRT28-201ENST00000306658 LYPD5Q6UWN5 251 aa12.11□□□□□ -0.47
KRT28-201ENST00000306658 DNAH9Q9NYC9 4486 aa12.11□□□□□ -0.47
KRT28-201ENST00000306658 A0A1B0GUV1 79 aa12.1□□□□□ -0.47
KRT28-201ENST00000306658 IGLC3P0DOY3 106 aa12.1□□□□□ -0.47
KRT28-201ENST00000306658 NFE4Q86UQ8 179 aa12.1□□□□□ -0.47
KRT28-201ENST00000306658 C11orf86A6NJI1 115 aa12.1□□□□□ -0.47
KRT28-201ENST00000306658 A0A0J9YXV3 536 aa12.09□□□□□ -0.47
KRT28-201ENST00000306658 ANKRD39Q53RE8 183 aa12.09□□□□□ -0.47
KRT28-201ENST00000306658 C15orf53Q8NAA6 179 aa12.09□□□□□ -0.47
KRT28-201ENST00000306658 CHAC1Q9BUX1 264 aa12.09□□□□□ -0.47
KRT28-201ENST00000306658 COL7A1Q02388 2944 aa12.08□□□□□ -0.47
KRT28-201ENST00000306658 STAB2Q8WWQ8 2551 aa12.08□□□□□ -0.48
KRT28-201ENST00000306658 IGLV4-60A0A075B6I1 120 aa12.07□□□□□ -0.48
KRT28-201ENST00000306658 TRAV8-6A0A0B4J262 113 aa12.07□□□□□ -0.48
KRT28-201ENST00000306658 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
KRT28-201ENST00000306658 UBE2D1P51668 147 aa12.07□□□□□ -0.48
KRT28-201ENST00000306658 TMEM170BQ5T4T1 132 aa12.07□□□□□ -0.48
KRT28-201ENST00000306658 C14orf144Q96I85 54 aa12.07□□□□□ -0.48
KRT28-201ENST00000306658 RBX1P62877 108 aa12.06□□□□□ -0.48
KRT28-201ENST00000306658 SEC11AP67812 179 aa12.06□□□□□ -0.48
KRT28-201ENST00000306658 MPV17L2Q567V2 206 aa12.06□□□□□ -0.48
KRT28-201ENST00000306658 MIEN1Q9BRT3 115 aa12.06□□□□□ -0.48
KRT28-201ENST00000306658 UQCR10Q9UDW1 63 aa12.06□□□□□ -0.48
KRT28-201ENST00000306658 HERVK_113P61574 105 aa12.06□□□□□ -0.48
KRT28-201ENST00000306658 MEGF8Q7Z7M0 2845 aa12.06□□□□□ -0.48
KRT28-201ENST00000306658 TRAV13-1A0A0B4J241 112 aa12.05□□□□□ -0.48
KRT28-201ENST00000306658 TCTAP57738 103 aa12.05□□□□□ -0.48
KRT28-201ENST00000306658 GEMIN7Q9H840 131 aaKnown RBP12.05□□□□□ -0.48
KRT28-201ENST00000306658 DDTP30046 118 aa12.04□□□□□ -0.48
KRT28-201ENST00000306658 NMUP48645 174 aa12.04□□□□□ -0.48
KRT28-201ENST00000306658 FAM19A3Q7Z5A8 133 aa12.04□□□□□ -0.48
KRT28-201ENST00000306658 COX8AP10176 69 aa12.03□□□□□ -0.48
KRT28-201ENST00000306658 ZNF22P17026 224 aaPredicted RBP12.03□□□□□ -0.48
KRT28-201ENST00000306658 HERVK_113P63121 156 aa12.03□□□□□ -0.48
KRT28-201ENST00000306658 SLC25A34Q6PIV7 304 aa12.03□□□□□ -0.48
KRT28-201ENST00000306658 IGLL5B9A064 214 aa12.03□□□□□ -0.48
KRT28-201ENST00000306658 ESRGQ1W209 222 aa12.03□□□□□ -0.48
KRT28-201ENST00000306658 E9PLD3 99 aa12.02□□□□□ -0.49
KRT28-201ENST00000306658 LINC00242Q5T6M2 205 aa12.02□□□□□ -0.49
KRT28-201ENST00000306658 IGKV2D-26A0A0A0MRZ7 120 aa12.01□□□□□ -0.49
KRT28-201ENST00000306658 LINC00469Q8N7U9 141 aa12.01□□□□□ -0.49
KRT28-201ENST00000306658 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
KRT28-201ENST00000306658 TMEM223A0PJW6 202 aa12□□□□□ -0.49
KRT28-201ENST00000306658 ANGP03950 147 aaKnown RBP12□□□□□ -0.49
KRT28-201ENST00000306658 H3BRM9 83 aa12□□□□□ -0.49
KRT28-201ENST00000306658 PRKDCP78527 4128 aaKnown RBP11.99□□□□□ -0.49
KRT28-201ENST00000306658 IGLV5-45A0A087WSX0 123 aa11.99□□□□□ -0.49
KRT28-201ENST00000306658 BOD1L2Q8IYS8 172 aa11.99□□□□□ -0.49
KRT28-201ENST00000306658 LINC00959A0A1B0GUT2 108 aa11.98□□□□□ -0.49
KRT28-201ENST00000306658 CCL25O15444 150 aa11.98□□□□□ -0.49
KRT28-201ENST00000306658 DLEU1O43261 78 aa11.98□□□□□ -0.49
KRT28-201ENST00000306658 COX6A2Q02221 97 aa11.98□□□□□ -0.49
KRT28-201ENST00000306658 PCP2Q8IVA1 136 aa11.98□□□□□ -0.49
KRT28-201ENST00000306658 LINC00269Q8N2A0 174 aa11.98□□□□□ -0.49
KRT28-201ENST00000306658 CDKN2A-AS1Q9UH64 79 aa11.98□□□□□ -0.49
KRT28-201ENST00000306658 HNRNPA3P51991 378 aaKnown RBP11.97□□□□□ -0.49
KRT28-201ENST00000306658 SS18Q15532 418 aa11.97□□□□□ -0.49
KRT28-201ENST00000306658 CCL18P55774 89 aa11.97□□□□□ -0.49
KRT28-201ENST00000306658 WFDC10BQ8IUB3 73 aa11.97□□□□□ -0.49
KRT28-201ENST00000306658 Q8N3U1 123 aa11.97□□□□□ -0.49
KRT28-201ENST00000306658 REG3AQ06141 175 aa11.96□□□□□ -0.5
KRT28-201ENST00000306658 LINC00587B1AMM8 73 aa11.95□□□□□ -0.5
KRT28-201ENST00000306658 LEPROTO15243 131 aa11.95□□□□□ -0.5
KRT28-201ENST00000306658 PLEKHB2Q96CS7 222 aa11.95□□□□□ -0.5
KRT28-201ENST00000306658 IGHV1-58A0A0C4DH39 117 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 IGHV3-30P01768 117 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 IGHV3-33P01772 117 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 IGHV3-30-5P0DP03 117 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 CLPSL2Q6UWE3 100 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 TTTY13Q9BZ97 58 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 KLK12Q9UKR0 248 aa11.94□□□□□ -0.5
KRT28-201ENST00000306658 IGHV3-64A0A075B6Q5 118 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms