RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SDIM1Q6ZPB5 146 aa7.91□□□□□ -1.14
ZNF558-201ENST00000301475 LINC00308Q8TCZ7 52 aa7.91□□□□□ -1.14
ZNF558-201ENST00000301475 KNCNA6PVL3 124 aa7.91□□□□□ -1.14
ZNF558-201ENST00000301475 NDUFA1O15239 70 aa7.91□□□□□ -1.14
ZNF558-201ENST00000301475 SOSTDC1Q6X4U4 206 aa7.91□□□□□ -1.14
ZNF558-201ENST00000301475 LINC00467Q9BRT7 94 aa7.91□□□□□ -1.14
ZNF558-201ENST00000301475 CSPG4Q6UVK1 2322 aa7.9□□□□□ -1.14
ZNF558-201ENST00000301475 H3BUA1 57 aa7.9□□□□□ -1.14
ZNF558-201ENST00000301475 UQCRQO14949 82 aa7.9□□□□□ -1.14
ZNF558-201ENST00000301475 HERVK_113P63121 156 aa7.9□□□□□ -1.14
ZNF558-201ENST00000301475 Q6ZSN1 163 aa7.9□□□□□ -1.14
ZNF558-201ENST00000301475 ZNF625Q96I27 306 aaPredicted RBP7.9□□□□□ -1.14
ZNF558-201ENST00000301475 DNAJC30Q96LL9 226 aa7.9□□□□□ -1.14
ZNF558-201ENST00000301475 NAV2Q8IVL1 2488 aa7.9□□□□□ -1.14
ZNF558-201ENST00000301475 PRM2P04554 102 aa7.9□□□□□ -1.14
ZNF558-201ENST00000301475 NRGNQ92686 78 aa7.9□□□□□ -1.14
ZNF558-201ENST00000301475 EDA2RQ9HAV5 297 aa7.9□□□□□ -1.14
ZNF558-201ENST00000301475 LINC00526Q96FQ7 95 aa7.89□□□□□ -1.15
ZNF558-201ENST00000301475 IGLV1-40P01703 118 aa7.89□□□□□ -1.15
ZNF558-201ENST00000301475 HTN1P15515 57 aa7.89□□□□□ -1.15
ZNF558-201ENST00000301475 FAM218AQ96MZ4 157 aa7.89□□□□□ -1.15
ZNF558-201ENST00000301475 Q9H8V8 135 aa7.89□□□□□ -1.15
ZNF558-201ENST00000301475 CSDC2Q9Y534 153 aaKnown RBP7.89□□□□□ -1.15
ZNF558-201ENST00000301475 K7EMT4 169 aa7.89□□□□□ -1.15
ZNF558-201ENST00000301475 IGHV3-38A0A0C4DH36 116 aa7.88□□□□□ -1.15
ZNF558-201ENST00000301475 COX6A2Q02221 97 aa7.88□□□□□ -1.15
ZNF558-201ENST00000301475 C5orf38Q86SI9 138 aa7.88□□□□□ -1.15
ZNF558-201ENST00000301475 H3BUX3 64 aa7.88□□□□□ -1.15
ZNF558-201ENST00000301475 TIRAPP58753 221 aa7.88□□□□□ -1.15
ZNF558-201ENST00000301475 NOTCH2Q04721 2471 aa7.88□□□□□ -1.15
ZNF558-201ENST00000301475 IGLV5-45A0A087WSX0 123 aa7.87□□□□□ -1.15
ZNF558-201ENST00000301475 K7EQG2 157 aa7.87□□□□□ -1.15
ZNF558-201ENST00000301475 IGHV4-38-2P0DP08 117 aa7.87□□□□□ -1.15
ZNF558-201ENST00000301475 SNRPD3P62318 126 aaKnown RBP7.87□□□□□ -1.15
ZNF558-201ENST00000301475 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
ZNF558-201ENST00000301475 C2orf48Q96LS8 159 aa7.87□□□□□ -1.15
ZNF558-201ENST00000301475 CYSTM1Q9H1C7 97 aa7.86□□□□□ -1.15
ZNF558-201ENST00000301475 PEMTQ9UBM1 199 aa7.86□□□□□ -1.15
ZNF558-201ENST00000301475 CUBNO60494 3623 aa7.86□□□□□ -1.15
ZNF558-201ENST00000301475 FBN2P35556 2912 aa7.86□□□□□ -1.15
ZNF558-201ENST00000301475 ANKRD17O75179 2603 aaKnown RBP7.86□□□□□ -1.15
ZNF558-201ENST00000301475 HELZ2Q9BYK8 2649 aaKnown RBP7.86□□□□□ -1.15
ZNF558-201ENST00000301475 IGLV5-39A0A0G2JS06 123 aa7.86□□□□□ -1.15
ZNF558-201ENST00000301475 TRACP01848 142 aa7.86□□□□□ -1.15
ZNF558-201ENST00000301475 CFHR3Q02985 330 aa7.86□□□□□ -1.15
ZNF558-201ENST00000301475 C2CD3Q4AC94 2353 aa7.86□□□□□ -1.15
ZNF558-201ENST00000301475 COX7CP15954 63 aa7.86□□□□□ -1.15
ZNF558-201ENST00000301475 CIRBPQ14011 172 aaKnown RBP7.86□□□□□ -1.15
ZNF558-201ENST00000301475 BBC3Q96PG8 261 aaPredicted RBP7.86□□□□□ -1.15
ZNF558-201ENST00000301475 IGHV3OR16-12A0A075B7B8 117 aa7.85□□□□□ -1.15
ZNF558-201ENST00000301475 A6NDX4 124 aa7.85□□□□□ -1.15
ZNF558-201ENST00000301475 ATP5G1P05496 136 aa7.85□□□□□ -1.15
ZNF558-201ENST00000301475 C10orf99Q6UWK7 81 aa7.85□□□□□ -1.15
ZNF558-201ENST00000301475 CXCL5P42830 114 aa7.85□□□□□ -1.15
ZNF558-201ENST00000301475 HIST1H4AP62805 103 aaKnown RBP7.85□□□□□ -1.15
ZNF558-201ENST00000301475 GAGE2AQ6NT46 116 aa7.85□□□□□ -1.15
ZNF558-201ENST00000301475 NBPF19A0A087WUL8 3843 aa7.85□□□□□ -1.15
ZNF558-201ENST00000301475 Q9HAA7 133 aa7.84□□□□□ -1.15
ZNF558-201ENST00000301475 LINC00242Q5T6M2 205 aa7.84□□□□□ -1.16
ZNF558-201ENST00000301475 FAM222AQ5U5X8 452 aa7.84□□□□□ -1.16
ZNF558-201ENST00000301475 SMIM1B2RUZ4 78 aa7.83□□□□□ -1.16
ZNF558-201ENST00000301475 J3KT08 172 aa7.83□□□□□ -1.16
ZNF558-201ENST00000301475 HOXD3P31249 432 aaPredicted RBP7.83□□□□□ -1.16
ZNF558-201ENST00000301475 FAM19A5Q7Z5A7 132 aaPredicted RBP7.83□□□□□ -1.16
ZNF558-201ENST00000301475 RS1O15537 224 aa7.83□□□□□ -1.16
ZNF558-201ENST00000301475 CRYGAP11844 174 aa7.83□□□□□ -1.16
ZNF558-201ENST00000301475 PIK3CD-AS1Q5SR53 167 aa7.83□□□□□ -1.16
ZNF558-201ENST00000301475 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
ZNF558-201ENST00000301475 FASNP49327 2511 aaKnown RBP7.83□□□□□ -1.16
ZNF558-201ENST00000301475 hADV29S1A0JD25 119 aa7.82□□□□□ -1.16
ZNF558-201ENST00000301475 LRRC75A-AS1Q8N1F1 130 aa7.82□□□□□ -1.16
ZNF558-201ENST00000301475 RNF152Q8N8N0 203 aa7.82□□□□□ -1.16
ZNF558-201ENST00000301475 SONP18583 2426 aaKnown RBP7.82□□□□□ -1.16
ZNF558-201ENST00000301475 A0A1B0GX51 115 aa7.82□□□□□ -1.16
ZNF558-201ENST00000301475 ATP5J2P56134 94 aa7.82□□□□□ -1.16
ZNF558-201ENST00000301475 SYNJ2BPP57105 145 aa7.82□□□□□ -1.16
ZNF558-201ENST00000301475 UBR5O95071 2799 aaPredicted RBP7.82□□□□□ -1.16
ZNF558-201ENST00000301475 PSMB8P28062 276 aa7.81□□□□□ -1.16
ZNF558-201ENST00000301475 PRIMA1Q86XR5 153 aa7.81□□□□□ -1.16
ZNF558-201ENST00000301475 RBMY1BA6NDE4 496 aaKnown RBP7.81□□□□□ -1.16
ZNF558-201ENST00000301475 RBMY1EA6NEQ0 496 aaKnown RBP7.81□□□□□ -1.16
ZNF558-201ENST00000301475 RBMY1DP0C7P1 496 aaKnown RBP7.81□□□□□ -1.16
ZNF558-201ENST00000301475 INAFM2P0DMQ5 153 aa7.81□□□□□ -1.16
ZNF558-201ENST00000301475 MALP21145 153 aa7.81□□□□□ -1.16
ZNF558-201ENST00000301475 DGAT2L7PQ6IED9 249 aa7.81□□□□□ -1.16
ZNF558-201ENST00000301475 SMIM9A6NGZ8 99 aa7.8□□□□□ -1.16
ZNF558-201ENST00000301475 ATOX1O00244 68 aa7.8□□□□□ -1.16
ZNF558-201ENST00000301475 PIMREGQ9BSJ6 248 aa7.8□□□□□ -1.16
ZNF558-201ENST00000301475 TENM4Q6N022 2769 aa7.8□□□□□ -1.16
ZNF558-201ENST00000301475 TRAV13-1A0A0B4J241 112 aa7.8□□□□□ -1.16
ZNF558-201ENST00000301475 IGHV4-61A0A0C4DH41 118 aa7.8□□□□□ -1.16
ZNF558-201ENST00000301475 IGHV3-53P01767 116 aa7.8□□□□□ -1.16
ZNF558-201ENST00000301475 C5orf47Q569G3 176 aa7.79□□□□□ -1.16
ZNF558-201ENST00000301475 IGKV3D-7A0A0C4DH55 119 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 HIST2H2BCQ6DN03 193 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 HIST2H2BDQ6DRA6 164 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 LINC00337Q8N6G1 96 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 C14orf132Q9NPU4 83 aa7.78□□□□□ -1.16
ZNF558-201ENST00000301475 SETD2Q9BYW2 2564 aaPredicted RBP7.78□□□□□ -1.16
ZNF558-201ENST00000301475 A0A087WVE0 104 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms