RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 TMEM243Q9BU79 118 aa4.4□□□□□ -1.71
DEPDC4-201ENST00000299185 DAZ3Q9NR90 486 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-201ENST00000299185 A0A096LNJ9 63 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 IGKV3OR2-268A0A0C4DH90 116 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 TRBV27A0A0K0K1C4 114 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 LCE6AA0A183 80 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 SERF1AO75920 110 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 CCL18P55774 89 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 RBX1P62877 108 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 Q0VG73 95 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 COA6Q5JTJ3 125 aaKnown RBP4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 LINC00173Q6ZV60 143 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 FA2HQ7L5A8 372 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 Q8N8P6 123 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 C20orf78Q9BR46 151 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 DNAH6Q9C0G6 4158 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 TRBV25-1A0A075B6N4 114 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 TMEM262E9PQX1 116 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 VCYO14598 125 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 S100A6P06703 90 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 FGF6P10767 208 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 ESDP10768 282 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 NDUFA6P56556 154 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 TIRAPP58753 221 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 RPL32P62910 135 aaKnown RBP4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 PDZD11Q5EBL8 140 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 NIT1Q86X76 327 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 FAM19A2Q8N3H0 131 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 C20orf203Q8NBC4 194 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 PRSS3P2Q8NHM4 247 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 FAM104AQ969W3 186 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 Q9HAA7 133 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 LAMTOR2Q9Y2Q5 125 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 SACSQ9NZJ4 4579 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 TRAV8-6A0A0B4J262 113 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 C5orf52A6NGY3 159 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 PRSS47A8MTI9 375 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 SIVA1O15304 175 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 PPP1R17O96001 155 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 BTF3P20290 206 aaKnown RBP4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 SNRPEP62304 92 aaKnown RBP4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 LGALS9CQ6DKI2 356 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 C2orf66Q6UXQ4 117 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 SH2D6Q7Z4S9 175 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 BAGE3Q86Y29 109 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 KIR2DL4Q99706 377 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 UPK3BQ9BT76 320 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 KLK12Q9UKR0 248 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 CSMD3Q7Z407 3707 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 IGLV10-54A0A075B6I4 117 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 NBDYA0A0U1RRE5 68 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 UBE2L6O14933 153 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 ANGP03950 147 aaKnown RBP4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 DNAH10OSP0CZ25 163 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 TCTAP57738 103 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 LAGE3Q14657 143 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 AMMECR1LQ6DCA0 310 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 UBE2WQ96B02 151 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 Q9H8V8 135 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 NXT2Q9NPJ8 142 aaKnown RBP4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 UBE2D4Q9Y2X8 147 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 IGLV4-3A0A075B6K6 122 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 A0A087WX48 190 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 LINC00614P0C842 121 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 FUSP35637 526 aaKnown RBP eCLIP4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 WFDC2Q14508 124 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 LINC01556Q5JQF7 62 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 Q6ZR54 194 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 LINC00269Q8N2A0 174 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 LINC01546A6NGU7 62 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 HSBP1O75506 76 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 HBDP02042 147 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 ORMDL2Q53FV1 153 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 TMEM97Q5BJF2 176 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 ENHOQ6UWT2 76 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 SPATA12Q7Z6I5 190 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 HIST3H2BBQ8N257 126 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 OR5A1Q8NGJ0 315 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 CHCHD1Q96BP2 118 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 PACRGQ96M98 296 aaPredicted RBP4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 CYSLTR1Q9Y271 337 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 TRAV13-1A0A0B4J241 112 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 LOC105371267A0A1B0GV96 52 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 IFITM10A6NMD0 228 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 H0Y8G0 127 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 K7EMI3 77 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 LECT2O14960 151 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 FABP4P15090 132 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 REG3AQ06141 175 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 MRPL52Q86TS9 123 aaKnown RBP4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 TOMM6Q96B49 74 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 SCGB3A1Q96QR1 104 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 SPANXA1Q9NS26 97 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 IGIPA6NJ69 53 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 RTL8CO15255 209 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 CRPP02741 224 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 S100A2P29034 98 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms