RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 DEFB130AP0DP74 79 aa15.14■□□□□ 0.01
SOX17-201ENST00000297316 OR11H2Q8NH07 326 aa15.14■□□□□ 0.01
SOX17-201ENST00000297316 PYGO1Q9Y3Y4 419 aa15.14■□□□□ 0.01
SOX17-201ENST00000297316 TRBV7-3A0A075B6L6 115 aa15.13■□□□□ 0.01
SOX17-201ENST00000297316 UBE2D4Q9Y2X8 147 aa15.13■□□□□ 0.01
SOX17-201ENST00000297316 G3V4G9 280 aa15.12■□□□□ 0.01
SOX17-201ENST00000297316 TAL2Q16559 108 aa15.12■□□□□ 0.01
SOX17-201ENST00000297316 PAPPA-AS1Q5QFB9 102 aa15.12■□□□□ 0.01
SOX17-201ENST00000297316 VCX2Q9H322 139 aa15.12■□□□□ 0.01
SOX17-201ENST00000297316 NOTCH1P46531 2555 aa15.12■□□□□ 0.01
SOX17-201ENST00000297316 A0A0J9YXV3 536 aa15.11■□□□□ 0.01
SOX17-201ENST00000297316 TMEM170BQ5T4T1 132 aa15.11■□□□□ 0.01
SOX17-201ENST00000297316 NFE4Q86UQ8 179 aa15.11■□□□□ 0.01
SOX17-201ENST00000297316 AMELXQ99217 191 aa15.11■□□□□ 0.01
SOX17-201ENST00000297316 LOC100131303A0A0U1RQF7 123 aa15.11■□□□□ 0.01
SOX17-201ENST00000297316 GAGE12JA6NER3 117 aa15.11■□□□□ 0.01
SOX17-201ENST00000297316 GAGE4Q13068 117 aa15.11■□□□□ 0.01
SOX17-201ENST00000297316 GAGE5Q13069 117 aa15.11■□□□□ 0.01
SOX17-201ENST00000297316 GAGE13Q4V321 117 aa15.11■□□□□ 0.01
SOX17-201ENST00000297316 HIST1H4GQ99525 98 aa15.11■□□□□ 0.01
SOX17-201ENST00000297316 TRBV10-1A0A0K0K1A3 114 aa15.1■□□□□ 0.01
SOX17-201ENST00000297316 MYMXA0A1B0GTQ4 84 aa15.1■□□□□ 0.01
SOX17-201ENST00000297316 EGFEM1PQ0D2K5 195 aa15.1■□□□□ 0.01
SOX17-201ENST00000297316 RPL36AP83881 106 aaKnown RBP15.1■□□□□ 0.01
SOX17-201ENST00000297316 RPL36ALQ969Q0 106 aaKnown RBP15.1■□□□□ 0.01
SOX17-201ENST00000297316 TSPEAR-AS2P59090 65 aa15.09■□□□□ 0.01
SOX17-201ENST00000297316 UBE2D3P61077 147 aa15.09■□□□□ 0.01
SOX17-201ENST00000297316 UBE2D2P62837 147 aa15.09■□□□□ 0.01
SOX17-201ENST00000297316 NTM-AS1Q6ZSK4 140 aa15.09■□□□□ 0.01
SOX17-201ENST00000297316 DNAH3Q8TD57 4116 aa15.09■□□□□ 0.01
SOX17-201ENST00000297316 SMIM9A6NGZ8 99 aa15.09■□□□□ 0.01
SOX17-201ENST00000297316 IGLL5B9A064 214 aa15.09■□□□□ 0.01
SOX17-201ENST00000297316 C12orf74Q32Q52 190 aa15.09■□□□□ 0.01
SOX17-201ENST00000297316 Q6ZUT4 128 aa15.09■□□□□ 0.01
SOX17-201ENST00000297316 IGHV4-28A0A0C4DH34 117 aa15.08■□□□□ 0
SOX17-201ENST00000297316 SVIPQ8NHG7 77 aa15.08■□□□□ 0
SOX17-201ENST00000297316 TRGV4A0A0C4DH28 118 aa15.08■□□□□ 0
SOX17-201ENST00000297316 ZNF22P17026 224 aaPredicted RBP15.08■□□□□ 0
SOX17-201ENST00000297316 FHL2Q14192 279 aa15.08■□□□□ 0
SOX17-201ENST00000297316 FAM222AQ5U5X8 452 aa15.07■□□□□ 0
SOX17-201ENST00000297316 SPANXA1Q9NS26 97 aa15.07■□□□□ 0
SOX17-201ENST00000297316 PLEKHB2Q96CS7 222 aa15.06■□□□□ 0
SOX17-201ENST00000297316 ZNF815PA8K554 130 aa15.06■□□□□ 0
SOX17-201ENST00000297316 LINC00694P0DN24 101 aa15.06■□□□□ 0
SOX17-201ENST00000297316 LINC00612Q8N6U2 182 aa15.06■□□□□ 0
SOX17-201ENST00000297316 HERVK_113P61574 105 aa15.05■□□□□ 0
SOX17-201ENST00000297316 RNF183Q96D59 192 aa15.05■□□□□ -0
SOX17-201ENST00000297316 TMEM223A0PJW6 202 aa15.04■□□□□ -0
SOX17-201ENST00000297316 Q8NAQ8 132 aa15.04■□□□□ -0
SOX17-201ENST00000297316 DAZ4Q86SG3 579 aaKnown RBP15.04■□□□□ -0
SOX17-201ENST00000297316 DAZ3Q9NR90 486 aaKnown RBP15.04■□□□□ -0
SOX17-201ENST00000297316 TRBV6-4A0A1B0GX49 114 aa15.03■□□□□ -0
SOX17-201ENST00000297316 RETNQ9HD89 108 aa15.03■□□□□ -0
SOX17-201ENST00000297316 CELA1Q9UNI1 258 aa15.03■□□□□ -0
SOX17-201ENST00000297316 NBEAL1Q6ZS30 2694 aa15.03■□□□□ -0
SOX17-201ENST00000297316 IGHV3-64A0A075B6Q5 118 aa15.03■□□□□ -0
SOX17-201ENST00000297316 CRYBA4P53673 196 aa15.03■□□□□ -0
SOX17-201ENST00000297316 MRPS36P82909 103 aaKnown RBP15.03■□□□□ -0
SOX17-201ENST00000297316 RPL24P83731 157 aaKnown RBP15.03■□□□□ -0
SOX17-201ENST00000297316 MDFIQ99750 246 aa15.02■□□□□ -0
SOX17-201ENST00000297316 SBSPONQ8IVN8 264 aa15.01□□□□□ -0.01
SOX17-201ENST00000297316 TEX48A0A1B0GUV7 120 aa15.01□□□□□ -0.01
SOX17-201ENST00000297316 PRB2P02812 416 aaPredicted RBP15.01□□□□□ -0.01
SOX17-201ENST00000297316 A0A1B0GWB2 263 aa15□□□□□ -0.01
SOX17-201ENST00000297316 J3QQQ9 107 aa14.99□□□□□ -0.01
SOX17-201ENST00000297316 CIDEAO60543 219 aa14.99□□□□□ -0.01
SOX17-201ENST00000297316 H3BMG7 143 aa14.99□□□□□ -0.01
SOX17-201ENST00000297316 MIFP14174 115 aa14.99□□□□□ -0.01
SOX17-201ENST00000297316 TIMM21Q9BVV7 248 aa14.99□□□□□ -0.01
SOX17-201ENST00000297316 LYRM9A8MSI8 78 aa14.98□□□□□ -0.01
SOX17-201ENST00000297316 SCGB1D4Q6XE38 83 aa14.98□□□□□ -0.01
SOX17-201ENST00000297316 TENM3Q9P273 2699 aa14.97□□□□□ -0.01
SOX17-201ENST00000297316 F8W1H4 67 aa14.97□□□□□ -0.01
SOX17-201ENST00000297316 LEPROTO15243 131 aa14.97□□□□□ -0.01
SOX17-201ENST00000297316 UBE2D1P51668 147 aa14.97□□□□□ -0.01
SOX17-201ENST00000297316 WFDC2Q14508 124 aa14.97□□□□□ -0.01
SOX17-201ENST00000297316 DGAT2L7PQ6IED9 249 aa14.97□□□□□ -0.01
SOX17-201ENST00000297316 TINCRA0A1B0GVN0 87 aa14.96□□□□□ -0.01
SOX17-201ENST00000297316 TRAV8-3A0A0A6YYJ7 113 aa14.95□□□□□ -0.02
SOX17-201ENST00000297316 A0A0J9YY99 117 aa14.95□□□□□ -0.02
SOX17-201ENST00000297316 A8MZ25 164 aa14.95□□□□□ -0.02
SOX17-201ENST00000297316 GTSF1LQ9H1H1 148 aa14.95□□□□□ -0.02
SOX17-201ENST00000297316 MGAM2Q2M2H8 2515 aa14.95□□□□□ -0.02
SOX17-201ENST00000297316 LGALS3P17931 250 aaKnown RBP14.95□□□□□ -0.02
SOX17-201ENST00000297316 DAD1P61803 113 aa14.94□□□□□ -0.02
SOX17-201ENST00000297316 SRSF9Q13242 221 aaKnown RBP eCLIP14.93□□□□□ -0.02
SOX17-201ENST00000297316 TMEM243Q9BU79 118 aa14.93□□□□□ -0.02
SOX17-201ENST00000297316 SPANXB1Q9NS25 103 aaPredicted RBP14.93□□□□□ -0.02
SOX17-201ENST00000297316 IGHV3-30-3P0DP02 117 aa14.93□□□□□ -0.02
SOX17-201ENST00000297316 GYPEP15421 78 aa14.93□□□□□ -0.02
SOX17-201ENST00000297316 COX6A2Q02221 97 aa14.93□□□□□ -0.02
SOX17-201ENST00000297316 PGPEP1Q9NXJ5 209 aa14.93□□□□□ -0.02
SOX17-201ENST00000297316 MTURNQ8N3F0 131 aa14.92□□□□□ -0.02
SOX17-201ENST00000297316 SPINK8P0C7L1 97 aa14.92□□□□□ -0.02
SOX17-201ENST00000297316 CSDC2Q9Y534 153 aaKnown RBP14.92□□□□□ -0.02
SOX17-201ENST00000297316 TMEM238LA0A1B0GVL6 79 aa14.91□□□□□ -0.02
SOX17-201ENST00000297316 A6NJY4 79 aa14.91□□□□□ -0.02
SOX17-201ENST00000297316 CDC42SE2Q9NRR3 84 aa14.91□□□□□ -0.02
SOX17-201ENST00000297316 CDKN2A-AS1Q9UH64 79 aa14.91□□□□□ -0.02
SOX17-201ENST00000297316 A0A096LPF7 62 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms