RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 NDUFB1O75438 58 aa12.68□□□□□ -0.38
CDCP1-201ENST00000296129 A0A1B0GX51 115 aa12.68□□□□□ -0.38
CDCP1-201ENST00000296129 C14orf177Q52M58 125 aa12.68□□□□□ -0.38
CDCP1-201ENST00000296129 PIK3CD-AS1Q5SR53 167 aa12.68□□□□□ -0.38
CDCP1-201ENST00000296129 SPANXB1Q9NS25 103 aaPredicted RBP12.68□□□□□ -0.38
CDCP1-201ENST00000296129 B5MCH6 92 aa12.68□□□□□ -0.38
CDCP1-201ENST00000296129 G3V4G9 280 aa12.68□□□□□ -0.38
CDCP1-201ENST00000296129 LINC00308Q8TCZ7 52 aa12.68□□□□□ -0.38
CDCP1-201ENST00000296129 A8MZ25 164 aa12.67□□□□□ -0.38
CDCP1-201ENST00000296129 PYGO1Q9Y3Y4 419 aa12.67□□□□□ -0.38
CDCP1-201ENST00000296129 A0A1W2PPR1 153 aa12.67□□□□□ -0.38
CDCP1-201ENST00000296129 MRPS12O15235 138 aaKnown RBP12.66□□□□□ -0.38
CDCP1-201ENST00000296129 SMR3AQ99954 134 aa12.66□□□□□ -0.38
CDCP1-201ENST00000296129 IBA57-AS1B1ANH7 110 aa12.65□□□□□ -0.38
CDCP1-201ENST00000296129 B9D2Q9BPU9 175 aa12.65□□□□□ -0.38
CDCP1-201ENST00000296129 ATOX1O00244 68 aa12.65□□□□□ -0.38
CDCP1-201ENST00000296129 CSPG4Q6UVK1 2322 aa12.65□□□□□ -0.38
CDCP1-201ENST00000296129 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.65□□□□□ -0.38
CDCP1-201ENST00000296129 UBE2D4Q9Y2X8 147 aa12.64□□□□□ -0.39
CDCP1-201ENST00000296129 PLXNB1O43157 2135 aa12.63□□□□□ -0.39
CDCP1-201ENST00000296129 RBX1P62877 108 aa12.63□□□□□ -0.39
CDCP1-201ENST00000296129 SS18L2Q9UHA2 77 aa12.63□□□□□ -0.39
CDCP1-201ENST00000296129 RNF183Q96D59 192 aa12.63□□□□□ -0.39
CDCP1-201ENST00000296129 HIGD2AQ9BW72 106 aa12.62□□□□□ -0.39
CDCP1-201ENST00000296129 XAGE1AQ9HD64 81 aa12.62□□□□□ -0.39
CDCP1-201ENST00000296129 SLPIP03973 132 aa12.61□□□□□ -0.39
CDCP1-201ENST00000296129 POLR2KP53803 58 aaKnown RBP12.61□□□□□ -0.39
CDCP1-201ENST00000296129 RAI1Q7Z5J4 1906 aaPredicted RBP12.61□□□□□ -0.39
CDCP1-201ENST00000296129 TRIAP1O43715 76 aa12.61□□□□□ -0.39
CDCP1-201ENST00000296129 DSCAML1Q8TD84 2053 aa12.61□□□□□ -0.39
CDCP1-201ENST00000296129 TRAV10A0A0B4J240 114 aa12.6□□□□□ -0.39
CDCP1-201ENST00000296129 TEX49A0A1B0GTD5 131 aa12.6□□□□□ -0.39
CDCP1-201ENST00000296129 ARHGAP32A7KAX9 2087 aa12.59□□□□□ -0.39
CDCP1-201ENST00000296129 MP68P56378 58 aa12.59□□□□□ -0.39
CDCP1-201ENST00000296129 CLUHP3Q96NS8 147 aa12.59□□□□□ -0.39
CDCP1-201ENST00000296129 PDE6GP18545 87 aa12.59□□□□□ -0.39
CDCP1-201ENST00000296129 FAM19A5Q7Z5A7 132 aaPredicted RBP12.59□□□□□ -0.39
CDCP1-201ENST00000296129 CNFNQ9BYD5 112 aa12.59□□□□□ -0.39
CDCP1-201ENST00000296129 CRIP2P52943 208 aaPredicted RBP12.59□□□□□ -0.39
CDCP1-201ENST00000296129 KPRPQ5T749 579 aaPredicted RBP12.59□□□□□ -0.39
CDCP1-201ENST00000296129 C4orf48Q5BLP8 95 aa12.58□□□□□ -0.39
CDCP1-201ENST00000296129 FAM19A1Q7Z5A9 133 aa12.58□□□□□ -0.39
CDCP1-201ENST00000296129 KIR2DL5BQ8NHK3 375 aa12.58□□□□□ -0.39
CDCP1-201ENST00000296129 NOTCH2Q04721 2471 aa12.58□□□□□ -0.4
CDCP1-201ENST00000296129 PTPN13Q12923 2485 aa12.58□□□□□ -0.4
CDCP1-201ENST00000296129 PRB2P02812 416 aaPredicted RBP12.58□□□□□ -0.4
CDCP1-201ENST00000296129 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.57□□□□□ -0.4
CDCP1-201ENST00000296129 NDUFA7O95182 113 aa12.57□□□□□ -0.4
CDCP1-201ENST00000296129 LINC00526Q96FQ7 95 aa12.57□□□□□ -0.4
CDCP1-201ENST00000296129 LINC00959A0A1B0GUT2 108 aa12.57□□□□□ -0.4
CDCP1-201ENST00000296129 TMEM258P61165 79 aa12.57□□□□□ -0.4
CDCP1-201ENST00000296129 ODF3L2Q3SX64 289 aa12.57□□□□□ -0.4
CDCP1-201ENST00000296129 CD164L2Q6UWJ8 174 aa12.57□□□□□ -0.4
CDCP1-201ENST00000296129 H0Y9J4 135 aa12.57□□□□□ -0.4
CDCP1-201ENST00000296129 C2orf91Q6ZV80 131 aa12.57□□□□□ -0.4
CDCP1-201ENST00000296129 UBE2D1P51668 147 aa12.57□□□□□ -0.4
CDCP1-201ENST00000296129 SYCNQ0VAF6 134 aa12.56□□□□□ -0.4
CDCP1-201ENST00000296129 ADAMTS20P59510 1910 aa12.56□□□□□ -0.4
CDCP1-201ENST00000296129 MRPS36P82909 103 aaKnown RBP12.56□□□□□ -0.4
CDCP1-201ENST00000296129 LELP1Q5T871 98 aa12.56□□□□□ -0.4
CDCP1-201ENST00000296129 TRBV30A0A0K0K1B3 111 aa12.56□□□□□ -0.4
CDCP1-201ENST00000296129 A0A087WZ39 114 aa12.55□□□□□ -0.4
CDCP1-201ENST00000296129 UBE2D3P61077 147 aa12.55□□□□□ -0.4
CDCP1-201ENST00000296129 UBE2D2P62837 147 aa12.55□□□□□ -0.4
CDCP1-201ENST00000296129 LINC00643Q86TS7 51 aa12.55□□□□□ -0.4
CDCP1-201ENST00000296129 OXLD1Q5BKU9 147 aa12.54□□□□□ -0.4
CDCP1-201ENST00000296129 WFDC9Q8NEX5 89 aa12.54□□□□□ -0.4
CDCP1-201ENST00000296129 TIMM17BO60830 172 aa12.54□□□□□ -0.4
CDCP1-201ENST00000296129 EXPH5Q8NEV8 1989 aa12.53□□□□□ -0.4
CDCP1-201ENST00000296129 IGHV4-30-4P0DP06 118 aa12.53□□□□□ -0.4
CDCP1-201ENST00000296129 UPK3BQ9BT76 320 aa12.53□□□□□ -0.4
CDCP1-201ENST00000296129 C6orf99Q4VX62 202 aa12.53□□□□□ -0.4
CDCP1-201ENST00000296129 A0A096LNI7 61 aa12.53□□□□□ -0.4
CDCP1-201ENST00000296129 IGLV2-18A0A075B6J9 118 aa12.52□□□□□ -0.4
CDCP1-201ENST00000296129 WNK1Q9H4A3 2382 aa12.52□□□□□ -0.41
CDCP1-201ENST00000296129 ATRXP46100 2492 aa12.52□□□□□ -0.41
CDCP1-201ENST00000296129 IGF2RP11717 2491 aa12.52□□□□□ -0.41
CDCP1-201ENST00000296129 LINC00310P59036 64 aa12.52□□□□□ -0.41
CDCP1-201ENST00000296129 NANOS2P60321 138 aaKnown RBP12.52□□□□□ -0.41
CDCP1-201ENST00000296129 TRAV23DV6A0A075B6W5 121 aa12.51□□□□□ -0.41
CDCP1-201ENST00000296129 A0A0J9YWU9 116 aa12.51□□□□□ -0.41
CDCP1-201ENST00000296129 URB1-AS1Q96HZ7 61 aa12.51□□□□□ -0.41
CDCP1-201ENST00000296129 CHKB-CPT1BH3BT56 60 aa12.51□□□□□ -0.41
CDCP1-201ENST00000296129 BPY2O14599 106 aa12.51□□□□□ -0.41
CDCP1-201ENST00000296129 CACNA1AO00555 2505 aa12.51□□□□□ -0.41
CDCP1-201ENST00000296129 PIEZO2Q9H5I5 2752 aa12.51□□□□□ -0.41
CDCP1-201ENST00000296129 SMIM20Q8N5G0 67 aa12.5□□□□□ -0.41
CDCP1-201ENST00000296129 CDC42SE2Q9NRR3 84 aa12.5□□□□□ -0.41
CDCP1-201ENST00000296129 IGIPA6NJ69 53 aa12.5□□□□□ -0.41
CDCP1-201ENST00000296129 IGKV2-28A0A075B6P5 120 aa12.5□□□□□ -0.41
CDCP1-201ENST00000296129 IGKV2D-28P01615 120 aa12.5□□□□□ -0.41
CDCP1-201ENST00000296129 SDIM1Q6ZPB5 146 aa12.49□□□□□ -0.41
CDCP1-201ENST00000296129 MRGPRG-AS1Q2M3A8 158 aa12.49□□□□□ -0.41
CDCP1-201ENST00000296129 NCOR2Q9Y618 2525 aa12.49□□□□□ -0.41
CDCP1-201ENST00000296129 MT-ATP8P03928 68 aa12.49□□□□□ -0.41
CDCP1-201ENST00000296129 IGLV1-51P01701 117 aa12.48□□□□□ -0.41
CDCP1-201ENST00000296129 LRCOL1A6NCL2 159 aa12.47□□□□□ -0.41
CDCP1-201ENST00000296129 SCXQ7RTU7 201 aa12.47□□□□□ -0.41
CDCP1-201ENST00000296129 M0R2N4 97 aa12.47□□□□□ -0.41
CDCP1-201ENST00000296129 NAV2Q8IVL1 2488 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms