RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 GAGE12JA6NER3 117 aa10.67□□□□□ -0.7
CCT3-201ENST00000295688 GAGE7O76087 117 aa10.67□□□□□ -0.7
CCT3-201ENST00000295688 GAGE12FP0CL80 117 aa10.67□□□□□ -0.7
CCT3-201ENST00000295688 GAGE12GP0CL81 117 aa10.67□□□□□ -0.7
CCT3-201ENST00000295688 GAGE12IP0CL82 117 aa10.67□□□□□ -0.7
CCT3-201ENST00000295688 RPL36AP83881 106 aaKnown RBP10.67□□□□□ -0.7
CCT3-201ENST00000295688 GAGE4Q13068 117 aa10.67□□□□□ -0.7
CCT3-201ENST00000295688 RPL36ALQ969Q0 106 aaKnown RBP10.67□□□□□ -0.7
CCT3-201ENST00000295688 Q9H8V8 135 aa10.67□□□□□ -0.7
CCT3-201ENST00000295688 COX6A2Q02221 97 aa10.66□□□□□ -0.7
CCT3-201ENST00000295688 DAZ2Q13117 558 aaKnown RBP10.66□□□□□ -0.7
CCT3-201ENST00000295688 LINC00242Q5T6M2 205 aa10.66□□□□□ -0.7
CCT3-201ENST00000295688 Q6ZSV7 163 aa10.66□□□□□ -0.7
CCT3-201ENST00000295688 DAZ4Q86SG3 579 aaKnown RBP10.66□□□□□ -0.7
CCT3-201ENST00000295688 MAPK1IP1LQ8NDC0 245 aa10.66□□□□□ -0.7
CCT3-201ENST00000295688 PPDPFQ9H3Y8 114 aa10.66□□□□□ -0.7
CCT3-201ENST00000295688 DAZ3Q9NR90 486 aaKnown RBP10.66□□□□□ -0.7
CCT3-201ENST00000295688 SS18L2Q9UHA2 77 aa10.66□□□□□ -0.7
CCT3-201ENST00000295688 HERV-K104P63124 156 aa10.66□□□□□ -0.7
CCT3-201ENST00000295688 KHDC1LQ5JSQ8 128 aa10.66□□□□□ -0.7
CCT3-201ENST00000295688 CITED2Q99967 270 aaPredicted RBP10.66□□□□□ -0.7
CCT3-201ENST00000295688 B5MCH6 92 aa10.65□□□□□ -0.7
CCT3-201ENST00000295688 STHQ8IWL8 128 aa10.65□□□□□ -0.7
CCT3-201ENST00000295688 CHD8Q9HCK8 2581 aa10.65□□□□□ -0.7
CCT3-201ENST00000295688 TRBV7-7A0A0K0K1E9 115 aa10.65□□□□□ -0.71
CCT3-201ENST00000295688 COX7A2LO14548 114 aa10.65□□□□□ -0.71
CCT3-201ENST00000295688 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.65□□□□□ -0.71
CCT3-201ENST00000295688 DAND5Q8N907 189 aa10.65□□□□□ -0.71
CCT3-201ENST00000295688 IL17DQ8TAD2 202 aa10.65□□□□□ -0.71
CCT3-201ENST00000295688 XCL2Q9UBD3 114 aa10.65□□□□□ -0.71
CCT3-201ENST00000295688 DOPEY1Q5JWR5 2465 aa10.65□□□□□ -0.71
CCT3-201ENST00000295688 ITPR1Q14643 2758 aa10.64□□□□□ -0.71
CCT3-201ENST00000295688 TRGV1A0A0A0MS02 117 aa10.63□□□□□ -0.71
CCT3-201ENST00000295688 K7EQD1 137 aa10.63□□□□□ -0.71
CCT3-201ENST00000295688 ACYP1P07311 99 aa10.63□□□□□ -0.71
CCT3-201ENST00000295688 SMIM1B2RUZ4 78 aa10.63□□□□□ -0.71
CCT3-201ENST00000295688 CCDC179H3BU77 68 aa10.63□□□□□ -0.71
CCT3-201ENST00000295688 VPS13CQ709C8 3753 aa10.62□□□□□ -0.71
CCT3-201ENST00000295688 MEIG1Q5JSS6 88 aa10.62□□□□□ -0.71
CCT3-201ENST00000295688 C1orf158Q8N1D5 194 aa10.62□□□□□ -0.71
CCT3-201ENST00000295688 SHISA2Q6UWI4 295 aa10.62□□□□□ -0.71
CCT3-201ENST00000295688 PRIMA1Q86XR5 153 aa10.62□□□□□ -0.71
CCT3-201ENST00000295688 CREBBPQ92793 2442 aa10.61□□□□□ -0.71
CCT3-201ENST00000295688 ODF3L2Q3SX64 289 aa10.61□□□□□ -0.71
CCT3-201ENST00000295688 TMEM86BQ8N661 226 aa10.61□□□□□ -0.71
CCT3-201ENST00000295688 CDC42SE2Q9NRR3 84 aa10.61□□□□□ -0.71
CCT3-201ENST00000295688 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
CCT3-201ENST00000295688 ZNF625Q96I27 306 aaPredicted RBP10.6□□□□□ -0.71
CCT3-201ENST00000295688 TRAV13-1A0A0B4J241 112 aa10.6□□□□□ -0.71
CCT3-201ENST00000295688 CMC4P56277 68 aaPredicted RBP10.6□□□□□ -0.71
CCT3-201ENST00000295688 TRACP01848 142 aa10.59□□□□□ -0.71
CCT3-201ENST00000295688 IMUPQ9GZP8 106 aa10.59□□□□□ -0.71
CCT3-201ENST00000295688 UBE2L6O14933 153 aa10.59□□□□□ -0.71
CCT3-201ENST00000295688 PF4P02776 101 aa10.59□□□□□ -0.71
CCT3-201ENST00000295688 NTM-AS1Q6ZSK4 140 aa10.59□□□□□ -0.71
CCT3-201ENST00000295688 CR1P17927 2039 aa10.59□□□□□ -0.71
CCT3-201ENST00000295688 F5H768 121 aa10.58□□□□□ -0.72
CCT3-201ENST00000295688 LRRC75A-AS1Q8N1F1 130 aa10.58□□□□□ -0.72
CCT3-201ENST00000295688 SOSTDC1Q6X4U4 206 aa10.58□□□□□ -0.72
CCT3-201ENST00000295688 TMEM243Q9BU79 118 aa10.58□□□□□ -0.72
CCT3-201ENST00000295688 A0A0U1RRA0 63 aa10.57□□□□□ -0.72
CCT3-201ENST00000295688 SDIM1Q6ZPB5 146 aa10.57□□□□□ -0.72
CCT3-201ENST00000295688 TRAV13-2A0A0B4J235 113 aa10.56□□□□□ -0.72
CCT3-201ENST00000295688 Q6ZTI0 123 aa10.56□□□□□ -0.72
CCT3-201ENST00000295688 FAM110AQ9BQ89 295 aa10.56□□□□□ -0.72
CCT3-201ENST00000295688 FAM222AQ5U5X8 452 aa10.56□□□□□ -0.72
CCT3-201ENST00000295688 ANKRD17O75179 2603 aaKnown RBP10.55□□□□□ -0.72
CCT3-201ENST00000295688 NDUFA7O95182 113 aa10.55□□□□□ -0.72
CCT3-201ENST00000295688 DEFB113Q30KQ7 82 aa10.55□□□□□ -0.72
CCT3-201ENST00000295688 PKD1L2Q7Z442 2459 aa10.55□□□□□ -0.72
CCT3-201ENST00000295688 COL12A1Q99715 3063 aa10.54□□□□□ -0.72
CCT3-201ENST00000295688 HIST2H2BCQ6DN03 193 aa10.54□□□□□ -0.72
CCT3-201ENST00000295688 HIST2H2BDQ6DRA6 164 aa10.54□□□□□ -0.72
CCT3-201ENST00000295688 OVOL2Q9BRP0 275 aa10.54□□□□□ -0.72
CCT3-201ENST00000295688 BAALC-AS2P0C853 105 aa10.53□□□□□ -0.72
CCT3-201ENST00000295688 C16orf74Q96GX8 76 aa10.53□□□□□ -0.72
CCT3-201ENST00000295688 CCL24O00175 119 aa10.53□□□□□ -0.72
CCT3-201ENST00000295688 MAP1AP78559 2803 aaPredicted RBP10.52□□□□□ -0.72
CCT3-201ENST00000295688 CELSR2Q9HCU4 2923 aa10.52□□□□□ -0.72
CCT3-201ENST00000295688 TRBV6-4A0A1B0GX49 114 aa10.52□□□□□ -0.72
CCT3-201ENST00000295688 RPL28P46779 137 aaKnown RBP10.52□□□□□ -0.72
CCT3-201ENST00000295688 COX7B2Q8TF08 81 aa10.52□□□□□ -0.72
CCT3-201ENST00000295688 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.72
CCT3-201ENST00000295688 CRPP02741 224 aa10.52□□□□□ -0.73
CCT3-201ENST00000295688 INAFM2P0DMQ5 153 aa10.52□□□□□ -0.73
CCT3-201ENST00000295688 USP9XQ93008 2570 aaPredicted RBP10.52□□□□□ -0.73
CCT3-201ENST00000295688 CRYBG3Q68DQ2 2970 aa10.51□□□□□ -0.73
CCT3-201ENST00000295688 USP9YO00507 2555 aaPredicted RBP10.51□□□□□ -0.73
CCT3-201ENST00000295688 LINC00643Q86TS7 51 aa10.5□□□□□ -0.73
CCT3-201ENST00000295688 Q96MF0 132 aa10.5□□□□□ -0.73
CCT3-201ENST00000295688 TRGV2A0A075B6R0 118 aa10.5□□□□□ -0.73
CCT3-201ENST00000295688 TMEM126AQ9H061 195 aa10.5□□□□□ -0.73
CCT3-201ENST00000295688 C22orf24Q9Y442 160 aa10.49□□□□□ -0.73
CCT3-201ENST00000295688 CFAP46Q8IYW2 2715 aa10.48□□□□□ -0.73
CCT3-201ENST00000295688 FLNCQ14315 2725 aa10.48□□□□□ -0.73
CCT3-201ENST00000295688 ATP5G1P05496 136 aa10.48□□□□□ -0.73
CCT3-201ENST00000295688 MIR7-3HGQ8N6C7 128 aa10.48□□□□□ -0.73
CCT3-201ENST00000295688 SND1-IT1Q9HBX3 110 aa10.48□□□□□ -0.73
CCT3-201ENST00000295688 TRGV4A0A0C4DH28 118 aa10.47□□□□□ -0.73
CCT3-201ENST00000295688 A0A1W2PRX2 142 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms