RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 FAM236BA0A1B0GV22 79 aa13.12□□□□□ -0.31
CDC42EP3-201ENST00000295324 DIRC1Q969H9 104 aa13.12□□□□□ -0.31
CDC42EP3-201ENST00000295324 CRIP2P52943 208 aaPredicted RBP13.11□□□□□ -0.31
CDC42EP3-201ENST00000295324 J3KT08 172 aa13.11□□□□□ -0.31
CDC42EP3-201ENST00000295324 IGHV4-30-4P0DP06 118 aa13.11□□□□□ -0.31
CDC42EP3-201ENST00000295324 C16orf95Q9H693 158 aa13.11□□□□□ -0.31
CDC42EP3-201ENST00000295324 DCANP1Q8TF63 244 aa13.11□□□□□ -0.31
CDC42EP3-201ENST00000295324 LINC00467Q9BRT7 94 aa13.11□□□□□ -0.31
CDC42EP3-201ENST00000295324 NFE4Q86UQ8 179 aa13.1□□□□□ -0.31
CDC42EP3-201ENST00000295324 KPRPQ5T749 579 aaPredicted RBP13.1□□□□□ -0.31
CDC42EP3-201ENST00000295324 M0QY20 66 aa13.09□□□□□ -0.31
CDC42EP3-201ENST00000295324 B9D2Q9BPU9 175 aa13.09□□□□□ -0.31
CDC42EP3-201ENST00000295324 TEN1Q86WV5 123 aa13.09□□□□□ -0.31
CDC42EP3-201ENST00000295324 KLLNB2CW77 178 aa13.09□□□□□ -0.31
CDC42EP3-201ENST00000295324 LINC01620Q4KN68 170 aa13.09□□□□□ -0.31
CDC42EP3-201ENST00000295324 NDUFB1O75438 58 aa13.08□□□□□ -0.31
CDC42EP3-201ENST00000295324 ZNF580Q9UK33 172 aa13.08□□□□□ -0.32
CDC42EP3-201ENST00000295324 CRIP1P50238 77 aa13.08□□□□□ -0.32
CDC42EP3-201ENST00000295324 NREPQ16612 68 aa13.08□□□□□ -0.32
CDC42EP3-201ENST00000295324 HIGD1BQ9P298 99 aa13.08□□□□□ -0.32
CDC42EP3-201ENST00000295324 IGLV2-18A0A075B6J9 118 aa13.06□□□□□ -0.32
CDC42EP3-201ENST00000295324 IGLV1-51P01701 117 aa13.06□□□□□ -0.32
CDC42EP3-201ENST00000295324 LY6G6CO95867 125 aa13.06□□□□□ -0.32
CDC42EP3-201ENST00000295324 MIAQ16674 131 aa13.06□□□□□ -0.32
CDC42EP3-201ENST00000295324 SETD2Q9BYW2 2564 aaPredicted RBP13.06□□□□□ -0.32
CDC42EP3-201ENST00000295324 C14orf132Q9NPU4 83 aa13.05□□□□□ -0.32
CDC42EP3-201ENST00000295324 WFDC2Q14508 124 aa13.05□□□□□ -0.32
CDC42EP3-201ENST00000295324 TTTY13Q9BZ97 58 aa13.05□□□□□ -0.32
CDC42EP3-201ENST00000295324 BRI3O95415 125 aa13.05□□□□□ -0.32
CDC42EP3-201ENST00000295324 TDRG1Q3Y452 100 aa13.04□□□□□ -0.32
CDC42EP3-201ENST00000295324 FXYD2P54710 66 aa13.04□□□□□ -0.32
CDC42EP3-201ENST00000295324 ODF3L2Q3SX64 289 aa13.04□□□□□ -0.32
CDC42EP3-201ENST00000295324 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.04□□□□□ -0.32
CDC42EP3-201ENST00000295324 IGLV2-11P01706 119 aa13.03□□□□□ -0.32
CDC42EP3-201ENST00000295324 LELP1Q5T871 98 aa13.03□□□□□ -0.32
CDC42EP3-201ENST00000295324 A0A0J9YWU9 116 aa13.03□□□□□ -0.32
CDC42EP3-201ENST00000295324 Q8N976 141 aa13.03□□□□□ -0.32
CDC42EP3-201ENST00000295324 HCFC1P51610 2035 aa13.03□□□□□ -0.32
CDC42EP3-201ENST00000295324 RBX1P62877 108 aa13.02□□□□□ -0.32
CDC42EP3-201ENST00000295324 FOXI1Q12951 378 aa13.02□□□□□ -0.32
CDC42EP3-201ENST00000295324 SVIPQ8NHG7 77 aa13.02□□□□□ -0.32
CDC42EP3-201ENST00000295324 TRBV6-5A0A0K0K1A5 114 aa13.02□□□□□ -0.32
CDC42EP3-201ENST00000295324 RNASE3P12724 160 aaKnown RBP13.02□□□□□ -0.32
CDC42EP3-201ENST00000295324 SPATA12Q7Z6I5 190 aa13.02□□□□□ -0.32
CDC42EP3-201ENST00000295324 CDKN2A-AS1Q9UH64 79 aa13.02□□□□□ -0.32
CDC42EP3-201ENST00000295324 TANC2Q9HCD6 1990 aa13.02□□□□□ -0.32
CDC42EP3-201ENST00000295324 M0R2N4 97 aa13.02□□□□□ -0.33
CDC42EP3-201ENST00000295324 RNASE8Q8TDE3 154 aaKnown RBP13.02□□□□□ -0.33
CDC42EP3-201ENST00000295324 PROK1P58294 105 aa13.02□□□□□ -0.33
CDC42EP3-201ENST00000295324 IGLV4-3A0A075B6K6 122 aa13.02□□□□□ -0.33
CDC42EP3-201ENST00000295324 A0A087WZ39 114 aa13.02□□□□□ -0.33
CDC42EP3-201ENST00000295324 HIGD2AQ9BW72 106 aa13.01□□□□□ -0.33
CDC42EP3-201ENST00000295324 COX7BP24311 80 aa13.01□□□□□ -0.33
CDC42EP3-201ENST00000295324 JMJD7-PLA2G4BH0Y9G9 81 aa13.01□□□□□ -0.33
CDC42EP3-201ENST00000295324 SYCNQ0VAF6 134 aa13.01□□□□□ -0.33
CDC42EP3-201ENST00000295324 LECT2O14960 151 aa13.01□□□□□ -0.33
CDC42EP3-201ENST00000295324 NANOS2P60321 138 aaKnown RBP13□□□□□ -0.33
CDC42EP3-201ENST00000295324 TRBV27A0A0K0K1C4 114 aa13□□□□□ -0.33
CDC42EP3-201ENST00000295324 PIK3CD-AS1Q5SR53 167 aa13□□□□□ -0.33
CDC42EP3-201ENST00000295324 PRR9Q5T870 116 aa13□□□□□ -0.33
CDC42EP3-201ENST00000295324 TRBV10-2A0A0K0K1G8 114 aa13□□□□□ -0.33
CDC42EP3-201ENST00000295324 C9orf85Q96MD7 179 aa13□□□□□ -0.33
CDC42EP3-201ENST00000295324 MRGPRG-AS1Q2M3A8 158 aa12.99□□□□□ -0.33
CDC42EP3-201ENST00000295324 DSCAML1Q8TD84 2053 aa12.99□□□□□ -0.33
CDC42EP3-201ENST00000295324 C7orf33Q8WU49 177 aa12.99□□□□□ -0.33
CDC42EP3-201ENST00000295324 EPG5Q9HCE0 2579 aa12.99□□□□□ -0.33
CDC42EP3-201ENST00000295324 TAX1BP3O14907 124 aa12.99□□□□□ -0.33
CDC42EP3-201ENST00000295324 NUPR2A6NF83 97 aa12.97□□□□□ -0.33
CDC42EP3-201ENST00000295324 CLEC2BQ92478 149 aa12.97□□□□□ -0.33
CDC42EP3-201ENST00000295324 LRCOL1A6NCL2 159 aa12.97□□□□□ -0.33
CDC42EP3-201ENST00000295324 PYGO1Q9Y3Y4 419 aa12.97□□□□□ -0.33
CDC42EP3-201ENST00000295324 CLUHP3Q96NS8 147 aa12.97□□□□□ -0.33
CDC42EP3-201ENST00000295324 CENPFP49454 3210 aa12.96□□□□□ -0.33
CDC42EP3-201ENST00000295324 C11orf21Q9P2W6 132 aa12.96□□□□□ -0.33
CDC42EP3-201ENST00000295324 H3BT86 120 aa12.96□□□□□ -0.33
CDC42EP3-201ENST00000295324 RNF185Q96GF1 192 aa12.96□□□□□ -0.33
CDC42EP3-201ENST00000295324 IBA57-AS1B1ANH7 110 aa12.96□□□□□ -0.33
CDC42EP3-201ENST00000295324 A0A0J9YXY3 114 aa12.96□□□□□ -0.34
CDC42EP3-201ENST00000295324 CD164L2Q6UWJ8 174 aa12.95□□□□□ -0.34
CDC42EP3-201ENST00000295324 BRK1Q8WUW1 75 aa12.95□□□□□ -0.34
CDC42EP3-201ENST00000295324 ZNF22P17026 224 aaPredicted RBP12.95□□□□□ -0.34
CDC42EP3-201ENST00000295324 FAM19A1Q7Z5A9 133 aa12.95□□□□□ -0.34
CDC42EP3-201ENST00000295324 MTORP42345 2549 aa12.94□□□□□ -0.34
CDC42EP3-201ENST00000295324 G3V4G9 280 aa12.94□□□□□ -0.34
CDC42EP3-201ENST00000295324 RAI1Q7Z5J4 1906 aaPredicted RBP12.94□□□□□ -0.34
CDC42EP3-201ENST00000295324 LOC100131303A0A0U1RQF7 123 aa12.93□□□□□ -0.34
CDC42EP3-201ENST00000295324 U3KQK5 164 aa12.93□□□□□ -0.34
CDC42EP3-201ENST00000295324 PRM2P04554 102 aa12.93□□□□□ -0.34
CDC42EP3-201ENST00000295324 ADAMTS20P59510 1910 aa12.92□□□□□ -0.34
CDC42EP3-201ENST00000295324 TMEM256-PLSCR3K7ERE1 68 aa12.92□□□□□ -0.34
CDC42EP3-201ENST00000295324 EDN2P20800 178 aa12.92□□□□□ -0.34
CDC42EP3-201ENST00000295324 PKD1L2Q7Z442 2459 aa12.92□□□□□ -0.34
CDC42EP3-201ENST00000295324 FAM19A5Q7Z5A7 132 aaPredicted RBP12.91□□□□□ -0.34
CDC42EP3-201ENST00000295324 SEC61GP60059 68 aa12.91□□□□□ -0.34
CDC42EP3-201ENST00000295324 TSHBP01222 138 aa12.91□□□□□ -0.34
CDC42EP3-201ENST00000295324 TMEM223A0PJW6 202 aa12.91□□□□□ -0.34
CDC42EP3-201ENST00000295324 XAGE1AQ9HD64 81 aa12.91□□□□□ -0.34
CDC42EP3-201ENST00000295324 RETNQ9HD89 108 aa12.91□□□□□ -0.34
CDC42EP3-201ENST00000295324 TNRC6BQ9UPQ9 1833 aaKnown RBP12.9□□□□□ -0.34
CDC42EP3-201ENST00000295324 MRPS12O15235 138 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms