RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 TOMM7Q9P0U1 55 aa10.69□□□□□ -0.7
CCNF-201ENST00000293968 FAM104AQ969W3 186 aa10.69□□□□□ -0.7
CCNF-201ENST00000293968 MYO18BQ8IUG5 2567 aa10.69□□□□□ -0.7
CCNF-201ENST00000293968 M0QXV9 152 aa10.68□□□□□ -0.7
CCNF-201ENST00000293968 VPS13CQ709C8 3753 aa10.68□□□□□ -0.7
CCNF-201ENST00000293968 RBMY1BA6NDE4 496 aaKnown RBP10.68□□□□□ -0.7
CCNF-201ENST00000293968 RBMY1EA6NEQ0 496 aaKnown RBP10.68□□□□□ -0.7
CCNF-201ENST00000293968 RBMY1DP0C7P1 496 aaKnown RBP10.68□□□□□ -0.7
CCNF-201ENST00000293968 SONP18583 2426 aaKnown RBP10.67□□□□□ -0.7
CCNF-201ENST00000293968 LINC00308Q8TCZ7 52 aa10.67□□□□□ -0.7
CCNF-201ENST00000293968 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.66□□□□□ -0.7
CCNF-201ENST00000293968 CRYBG3Q68DQ2 2970 aa10.66□□□□□ -0.7
CCNF-201ENST00000293968 A0A1W2PRX2 142 aa10.66□□□□□ -0.7
CCNF-201ENST00000293968 INSP01308 110 aa10.66□□□□□ -0.7
CCNF-201ENST00000293968 FAM236AA0A1B0GUQ0 79 aa10.65□□□□□ -0.7
CCNF-201ENST00000293968 FAM236BA0A1B0GV22 79 aa10.65□□□□□ -0.7
CCNF-201ENST00000293968 CUBNO60494 3623 aa10.65□□□□□ -0.71
CCNF-201ENST00000293968 UBE2L6O14933 153 aa10.64□□□□□ -0.71
CCNF-201ENST00000293968 NDUFA1O15239 70 aa10.64□□□□□ -0.71
CCNF-201ENST00000293968 LINC00694P0DN24 101 aa10.64□□□□□ -0.71
CCNF-201ENST00000293968 HERVK_113P63121 156 aa10.64□□□□□ -0.71
CCNF-201ENST00000293968 PIK3CD-AS1Q5SR53 167 aa10.64□□□□□ -0.71
CCNF-201ENST00000293968 CITED2Q99967 270 aaPredicted RBP10.64□□□□□ -0.71
CCNF-201ENST00000293968 BAALC-AS2P0C853 105 aa10.64□□□□□ -0.71
CCNF-201ENST00000293968 GAGE2AQ6NT46 116 aa10.64□□□□□ -0.71
CCNF-201ENST00000293968 LINC01356Q8N9X3 169 aa10.64□□□□□ -0.71
CCNF-201ENST00000293968 VPREB3Q9UKI3 123 aa10.64□□□□□ -0.71
CCNF-201ENST00000293968 Q8N2B8 174 aa10.63□□□□□ -0.71
CCNF-201ENST00000293968 Q9HAA7 133 aa10.63□□□□□ -0.71
CCNF-201ENST00000293968 RS1O15537 224 aa10.63□□□□□ -0.71
CCNF-201ENST00000293968 PEMTQ9UBM1 199 aa10.63□□□□□ -0.71
CCNF-201ENST00000293968 RPL36AP83881 106 aaKnown RBP10.62□□□□□ -0.71
CCNF-201ENST00000293968 RPL36ALQ969Q0 106 aaKnown RBP10.62□□□□□ -0.71
CCNF-201ENST00000293968 MAP6D1Q9H9H5 199 aa10.62□□□□□ -0.71
CCNF-201ENST00000293968 LINC00242Q5T6M2 205 aa10.62□□□□□ -0.71
CCNF-201ENST00000293968 STHQ8IWL8 128 aa10.62□□□□□ -0.71
CCNF-201ENST00000293968 DAZ2Q13117 558 aaKnown RBP10.62□□□□□ -0.71
CCNF-201ENST00000293968 DAZ4Q86SG3 579 aaKnown RBP10.62□□□□□ -0.71
CCNF-201ENST00000293968 DAZ3Q9NR90 486 aaKnown RBP10.62□□□□□ -0.71
CCNF-201ENST00000293968 JMJD1CQ15652 2540 aa10.62□□□□□ -0.71
CCNF-201ENST00000293968 NAV2Q8IVL1 2488 aa10.62□□□□□ -0.71
CCNF-201ENST00000293968 ZANQ9Y493 2812 aa10.62□□□□□ -0.71
CCNF-201ENST00000293968 TMEM89A2RUT3 159 aa10.62□□□□□ -0.71
CCNF-201ENST00000293968 COX7A2LO14548 114 aa10.62□□□□□ -0.71
CCNF-201ENST00000293968 Q6Q795 121 aa10.62□□□□□ -0.71
CCNF-201ENST00000293968 SVIPQ8NHG7 77 aa10.61□□□□□ -0.71
CCNF-201ENST00000293968 PKD1L2Q7Z442 2459 aa10.61□□□□□ -0.71
CCNF-201ENST00000293968 CELSR2Q9HCU4 2923 aa10.6□□□□□ -0.71
CCNF-201ENST00000293968 COPS9Q8WXC6 57 aa10.6□□□□□ -0.71
CCNF-201ENST00000293968 DNAJC30Q96LL9 226 aa10.6□□□□□ -0.71
CCNF-201ENST00000293968 TIRAPP58753 221 aa10.6□□□□□ -0.71
CCNF-201ENST00000293968 SOSTDC1Q6X4U4 206 aa10.6□□□□□ -0.71
CCNF-201ENST00000293968 C11orf68Q9H3H3 251 aaKnown RBP10.6□□□□□ -0.71
CCNF-201ENST00000293968 TIMM17BO60830 172 aa10.59□□□□□ -0.71
CCNF-201ENST00000293968 LINC00158P58513 81 aa10.59□□□□□ -0.71
CCNF-201ENST00000293968 ZNF702PQ9H963 129 aa10.59□□□□□ -0.71
CCNF-201ENST00000293968 Q6ZTI0 123 aa10.59□□□□□ -0.71
CCNF-201ENST00000293968 ABCA12Q86UK0 2595 aa10.59□□□□□ -0.71
CCNF-201ENST00000293968 FLNCQ14315 2725 aa10.59□□□□□ -0.71
CCNF-201ENST00000293968 DNAL4O96015 105 aa10.58□□□□□ -0.71
CCNF-201ENST00000293968 CRPP02741 224 aa10.58□□□□□ -0.71
CCNF-201ENST00000293968 HERV-K104P63124 156 aa10.58□□□□□ -0.71
CCNF-201ENST00000293968 OR13C6PQ8NH95 151 aa10.58□□□□□ -0.71
CCNF-201ENST00000293968 CCDC168Q8NDH2 2452 aa10.58□□□□□ -0.72
CCNF-201ENST00000293968 TRGV2A0A075B6R0 118 aa10.58□□□□□ -0.72
CCNF-201ENST00000293968 ANKRD17O75179 2603 aaKnown RBP10.58□□□□□ -0.72
CCNF-201ENST00000293968 SMIM1B2RUZ4 78 aa10.58□□□□□ -0.72
CCNF-201ENST00000293968 C11orf72Q8NBR9 251 aa10.57□□□□□ -0.72
CCNF-201ENST00000293968 DOPEY1Q5JWR5 2465 aa10.57□□□□□ -0.72
CCNF-201ENST00000293968 NOP10Q9NPE3 64 aaKnown RBP10.57□□□□□ -0.72
CCNF-201ENST00000293968 PFN2P35080 140 aa10.57□□□□□ -0.72
CCNF-201ENST00000293968 LRRK2Q5S007 2527 aa10.56□□□□□ -0.72
CCNF-201ENST00000293968 EPG5Q9HCE0 2579 aa10.56□□□□□ -0.72
CCNF-201ENST00000293968 C9orf153Q5TBE3 101 aa10.56□□□□□ -0.72
CCNF-201ENST00000293968 ZFYVE26Q68DK2 2539 aa10.56□□□□□ -0.72
CCNF-201ENST00000293968 FAM240AA0A1B0GVK7 77 aa10.55□□□□□ -0.72
CCNF-201ENST00000293968 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
CCNF-201ENST00000293968 MIR7-3HGQ8N6C7 128 aa10.55□□□□□ -0.72
CCNF-201ENST00000293968 UTP20O75691 2785 aaKnown RBP10.55□□□□□ -0.72
CCNF-201ENST00000293968 K7EQD1 137 aa10.55□□□□□ -0.72
CCNF-201ENST00000293968 EDA2RQ9HAV5 297 aa10.55□□□□□ -0.72
CCNF-201ENST00000293968 FAM218AQ96MZ4 157 aa10.55□□□□□ -0.72
CCNF-201ENST00000293968 ITPR1Q14643 2758 aa10.54□□□□□ -0.72
CCNF-201ENST00000293968 RPL35AP18077 110 aaKnown RBP10.54□□□□□ -0.72
CCNF-201ENST00000293968 ACYP1P07311 99 aa10.53□□□□□ -0.72
CCNF-201ENST00000293968 DEFB114Q30KQ6 69 aa10.53□□□□□ -0.72
CCNF-201ENST00000293968 TMEM243Q9BU79 118 aa10.53□□□□□ -0.72
CCNF-201ENST00000293968 SND1-IT1Q9HBX3 110 aa10.53□□□□□ -0.72
CCNF-201ENST00000293968 LOC100131303A0A0U1RQF7 123 aa10.53□□□□□ -0.72
CCNF-201ENST00000293968 IGLV5-39A0A0G2JS06 123 aa10.53□□□□□ -0.72
CCNF-201ENST00000293968 ATP5G1P05496 136 aa10.53□□□□□ -0.72
CCNF-201ENST00000293968 SMCR5Q8TEV8 140 aa10.53□□□□□ -0.72
CCNF-201ENST00000293968 PAX4O43316 350 aa10.52□□□□□ -0.72
CCNF-201ENST00000293968 NTM-AS1Q6ZSK4 140 aa10.52□□□□□ -0.72
CCNF-201ENST00000293968 DSCR9P59020 149 aa10.52□□□□□ -0.73
CCNF-201ENST00000293968 IGLV5-45A0A087WSX0 123 aa10.52□□□□□ -0.73
CCNF-201ENST00000293968 Q6YL49 198 aa10.52□□□□□ -0.73
CCNF-201ENST00000293968 TRGV4A0A0C4DH28 118 aa10.51□□□□□ -0.73
CCNF-201ENST00000293968 C5orf38Q86SI9 138 aa10.51□□□□□ -0.73
CCNF-201ENST00000293968 LINC00643Q86TS7 51 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms