RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 UBE2WQ96B02 151 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 FLNBO75369 2602 aaKnown RBP3.56□□□□□ -1.84
UBR1-201ENST00000290650 TRBV7-3A0A075B6L6 115 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 PSMB8P28062 276 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 OXLD1Q5BKU9 147 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 HHLA3Q9XRX5 114 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 PRB2P02812 416 aaPredicted RBP3.56□□□□□ -1.84
UBR1-201ENST00000290650 EBI3Q14213 229 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 Q6ZSV7 163 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 DEFB105AQ8NG35 78 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 BBC3Q96PG8 261 aaPredicted RBP3.56□□□□□ -1.84
UBR1-201ENST00000290650 PSCAO43653 123 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 NRACQ8N912 160 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 LINC00526Q96FQ7 95 aa3.56□□□□□ -1.84
UBR1-201ENST00000290650 MRPS12O15235 138 aaKnown RBP3.55□□□□□ -1.84
UBR1-201ENST00000290650 ZNF702PQ9H963 129 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 SPATA25Q9BR10 227 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 CHD6Q8TD26 2715 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 ZNF561-AS1K7EIQ3 104 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 K7EQG2 157 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 CRIP2P52943 208 aaPredicted RBP3.55□□□□□ -1.84
UBR1-201ENST00000290650 FLNAP21333 2647 aaKnown RBP3.55□□□□□ -1.84
UBR1-201ENST00000290650 IGKV2D-24A0A075B6R9 120 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 K7EMT4 169 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 CFC1BP0CG36 223 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 CFC1P0CG37 223 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 RHOHQ15669 191 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 NFE4Q86UQ8 179 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 NCR3O14931 201 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 HERVK_113P63121 156 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 SIVA1O15304 175 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 DEFB114Q30KQ6 69 aa3.55□□□□□ -1.84
UBR1-201ENST00000290650 A0A096LNJ9 63 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 TRAV4A0A0B4J268 109 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 ZNF580Q9UK33 172 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 ITPR3Q14573 2671 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 E9PLD3 99 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 C15orf53Q8NAA6 179 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 TRAV25A0A0B4J276 109 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 TRBV6-1A0A0K0K1D8 114 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 DCANP1Q8TF63 244 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 VSIG2Q96IQ7 327 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 ATP5G1P05496 136 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 CMC4P56277 68 aaPredicted RBP3.54□□□□□ -1.84
UBR1-201ENST00000290650 ATP6V0E2Q8NHE4 81 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 BRK1Q8WUW1 75 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 APOC4P55056 127 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 CDKN2A-AS1Q9UH64 79 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 PIK3CD-AS1Q5SR53 167 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 C1orf195Q5TG92 126 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 KLK12Q9UKR0 248 aa3.54□□□□□ -1.84
UBR1-201ENST00000290650 M0QY20 66 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 C20orf203Q8NBC4 194 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 NEXN-AS1Q8NBZ9 246 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 CLUHP3Q96NS8 147 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 G3V4G9 280 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 TCL1BO95988 128 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 MRPL23Q16540 153 aaKnown RBP3.53□□□□□ -1.84
UBR1-201ENST00000290650 C16orf74Q96GX8 76 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 PKIGQ9Y2B9 76 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 CFAP126Q5VTH2 177 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 ICOSQ9Y6W8 199 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 VPREB1P12018 145 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 SLC25A29Q8N8R3 303 aa3.53□□□□□ -1.84
UBR1-201ENST00000290650 IGLV4-3A0A075B6K6 122 aa3.53□□□□□ -1.85
UBR1-201ENST00000290650 RBMY1FQ15415 496 aaKnown RBP3.53□□□□□ -1.85
UBR1-201ENST00000290650 MIR7-3HGQ8N6C7 128 aa3.53□□□□□ -1.85
UBR1-201ENST00000290650 U3KQK5 164 aa3.53□□□□□ -1.85
UBR1-201ENST00000290650 RBM3P98179 157 aaKnown RBP3.52□□□□□ -1.85
UBR1-201ENST00000290650 SND1-IT1Q9HBX3 110 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 LY6G6DO95868 133 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 BAALC-AS2P0C853 105 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 HIGD2BQ4VC39 106 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 LINC00269Q8N2A0 174 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 RPL18AQ02543 176 aaKnown RBP3.52□□□□□ -1.85
UBR1-201ENST00000290650 FAM222AQ5U5X8 452 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 COX7B2Q8TF08 81 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 TMEM263Q8WUH6 116 aaKnown RBP3.52□□□□□ -1.85
UBR1-201ENST00000290650 SLPIP03973 132 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 NDUFA11Q86Y39 141 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 A0A0J9YXY3 114 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 GHRHP01286 108 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 IGLV1-40P01703 118 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 DAZ2Q13117 558 aaKnown RBP3.52□□□□□ -1.85
UBR1-201ENST00000290650 UFSP1Q6NVU6 142 aa3.52□□□□□ -1.85
UBR1-201ENST00000290650 DAZ4Q86SG3 579 aaKnown RBP3.52□□□□□ -1.85
UBR1-201ENST00000290650 DAZ3Q9NR90 486 aaKnown RBP3.52□□□□□ -1.85
UBR1-201ENST00000290650 IGHV4-28A0A0C4DH34 117 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 INSL3P51460 131 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 SEC61GP60059 68 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 TAL2Q16559 108 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 LINC01006Q8NI28 216 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 IGKV3D-7A0A0C4DH55 119 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 Q6ZSN1 163 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 UTP20O75691 2785 aaKnown RBP3.51□□□□□ -1.85
UBR1-201ENST00000290650 TEX49A0A1B0GTD5 131 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 TSHBP01222 138 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 HAMPP81172 84 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 C9orf66Q5T8R8 295 aa3.51□□□□□ -1.85
UBR1-201ENST00000290650 ZNF22P17026 224 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms