RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TRAV8-4A0A0B4J246 113 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 LRCOL1A6NCL2 159 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 GAGE12HA6NDE8 117 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 ESDP10768 282 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 XCL1P47992 114 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 FABP9Q0Z7S8 132 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 WFDC2Q14508 124 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 SS18Q15532 418 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 COX19Q49B96 90 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 C14orf177Q52M58 125 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 CDPF1Q6NVV7 123 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 MAPKAPK5-AS1Q8N8E1 139 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 MRPL18Q9H0U6 180 aaKnown RBP4.33□□□□□ -1.72
CD44-204ENST00000279452 PRR34Q9NV39 138 aa4.33□□□□□ -1.72
CD44-204ENST00000279452 PRSS47A8MTI9 375 aa4.32□□□□□ -1.72
CD44-204ENST00000279452 USP17L23D6RBM5 183 aa4.32□□□□□ -1.72
CD44-204ENST00000279452 MT-ND6P03923 174 aa4.32□□□□□ -1.72
CD44-204ENST00000279452 GCSHP23434 173 aa4.32□□□□□ -1.72
CD44-204ENST00000279452 IFI27P40305 119 aaPredicted RBP4.32□□□□□ -1.72
CD44-204ENST00000279452 RPL39P62891 51 aaKnown RBP4.32□□□□□ -1.72
CD44-204ENST00000279452 RPL32P62910 135 aaKnown RBP4.32□□□□□ -1.72
CD44-204ENST00000279452 Q6ZUT4 128 aa4.32□□□□□ -1.72
CD44-204ENST00000279452 MRPL52Q86TS9 123 aaKnown RBP4.32□□□□□ -1.72
CD44-204ENST00000279452 ZNF664Q8N3J9 261 aa4.32□□□□□ -1.72
CD44-204ENST00000279452 PRSS3P2Q8NHM4 247 aa4.32□□□□□ -1.72
CD44-204ENST00000279452 NTN5Q8WTR8 489 aaPredicted RBP4.32□□□□□ -1.72
CD44-204ENST00000279452 CHCHD10Q8WYQ3 142 aaPredicted RBP4.32□□□□□ -1.72
CD44-204ENST00000279452 GNB1LQ9BYB4 327 aa4.32□□□□□ -1.72
CD44-204ENST00000279452 UBE2D4Q9Y2X8 147 aa4.32□□□□□ -1.72
CD44-204ENST00000279452 TRAPPC1Q9Y5R8 145 aa4.32□□□□□ -1.72
CD44-204ENST00000279452 TRAV13-1A0A0B4J241 112 aa4.31□□□□□ -1.72
CD44-204ENST00000279452 hDV102S1A0JD36 115 aa4.31□□□□□ -1.72
CD44-204ENST00000279452 CCL25O15444 150 aa4.31□□□□□ -1.72
CD44-204ENST00000279452 ORMDL2Q53FV1 153 aa4.31□□□□□ -1.72
CD44-204ENST00000279452 Q8N8P6 123 aa4.31□□□□□ -1.72
CD44-204ENST00000279452 NXT2Q9NPJ8 142 aaKnown RBP4.31□□□□□ -1.72
CD44-204ENST00000279452 SMCO4Q9NRQ5 59 aa4.31□□□□□ -1.72
CD44-204ENST00000279452 CDC42SE2Q9NRR3 84 aa4.31□□□□□ -1.72
CD44-204ENST00000279452 SPANXA1Q9NS26 97 aa4.31□□□□□ -1.72
CD44-204ENST00000279452 CYSLTR1Q9Y271 337 aa4.31□□□□□ -1.72
CD44-204ENST00000279452 KMT2AQ03164 3969 aa4.3□□□□□ -1.72
CD44-204ENST00000279452 LINC00959A0A1B0GUT2 108 aa4.3□□□□□ -1.72
CD44-204ENST00000279452 IFITM10A6NMD0 228 aa4.3□□□□□ -1.72
CD44-204ENST00000279452 MALP21145 153 aa4.3□□□□□ -1.72
CD44-204ENST00000279452 LINC01620Q4KN68 170 aa4.3□□□□□ -1.72
CD44-204ENST00000279452 HIGD2BQ4VC39 106 aa4.3□□□□□ -1.72
CD44-204ENST00000279452 Q6ZN92 141 aa4.3□□□□□ -1.72
CD44-204ENST00000279452 FA2HQ7L5A8 372 aa4.3□□□□□ -1.72
CD44-204ENST00000279452 CBLN2Q8IUK8 224 aa4.3□□□□□ -1.72
CD44-204ENST00000279452 OPRPNQ99935 248 aaPredicted RBP4.3□□□□□ -1.72
CD44-204ENST00000279452 AP5S1Q9NUS5 200 aa4.3□□□□□ -1.72
CD44-204ENST00000279452 EPPK1P58107 5090 aaKnown RBP4.3□□□□□ -1.72
CD44-204ENST00000279452 PRSS1P07477 247 aa4.29□□□□□ -1.72
CD44-204ENST00000279452 KRTAP10-1P60331 282 aa4.29□□□□□ -1.72
CD44-204ENST00000279452 HAMPP81172 84 aa4.29□□□□□ -1.72
CD44-204ENST00000279452 C2orf66Q6UXQ4 117 aa4.29□□□□□ -1.72
CD44-204ENST00000279452 C2orf88Q9BSF0 95 aa4.29□□□□□ -1.72
CD44-204ENST00000279452 ALKBH7Q9BT30 221 aaPredicted RBP4.29□□□□□ -1.72
CD44-204ENST00000279452 TIMM21Q9BVV7 248 aa4.29□□□□□ -1.72
CD44-204ENST00000279452 CSDC2Q9Y534 153 aaKnown RBP4.29□□□□□ -1.72
CD44-204ENST00000279452 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.28□□□□□ -1.72
CD44-204ENST00000279452 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
CD44-204ENST00000279452 C1orf196B1AJZ1 125 aa4.28□□□□□ -1.72
CD44-204ENST00000279452 K7EMI3 77 aa4.28□□□□□ -1.72
CD44-204ENST00000279452 COX7A2LO14548 114 aa4.28□□□□□ -1.72
CD44-204ENST00000279452 G0S2P27469 103 aa4.28□□□□□ -1.72
CD44-204ENST00000279452 FOXI1Q12951 378 aa4.28□□□□□ -1.72
CD44-204ENST00000279452 KRTAP26-1Q6PEX3 210 aa4.28□□□□□ -1.72
CD44-204ENST00000279452 TEX43Q6ZNM6 134 aa4.28□□□□□ -1.72
CD44-204ENST00000279452 TMEM141Q96I45 108 aa4.28□□□□□ -1.72
CD44-204ENST00000279452 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
CD44-204ENST00000279452 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
CD44-204ENST00000279452 IGLV4-3A0A075B6K6 122 aa4.27□□□□□ -1.73
CD44-204ENST00000279452 ZNF561-AS1K7EIQ3 104 aa4.27□□□□□ -1.73
CD44-204ENST00000279452 CDK2AP2O75956 126 aa4.27□□□□□ -1.73
CD44-204ENST00000279452 MRPS36P82909 103 aaKnown RBP4.27□□□□□ -1.73
CD44-204ENST00000279452 CD164L2Q6UWJ8 174 aa4.27□□□□□ -1.73
CD44-204ENST00000279452 C5orf38Q86SI9 138 aa4.27□□□□□ -1.73
CD44-204ENST00000279452 SCGB3A1Q96QR1 104 aa4.27□□□□□ -1.73
CD44-204ENST00000279452 VCX2Q9H322 139 aa4.27□□□□□ -1.73
CD44-204ENST00000279452 DNAH6Q9C0G6 4158 aa4.26□□□□□ -1.73
CD44-204ENST00000279452 IGHV1-58A0A0C4DH39 117 aa4.26□□□□□ -1.73
CD44-204ENST00000279452 APOMO95445 188 aa4.26□□□□□ -1.73
CD44-204ENST00000279452 PAPPA-AS1Q5QFB9 102 aa4.26□□□□□ -1.73
CD44-204ENST00000279452 ZC2HC1BQ5TFG8 222 aa4.26□□□□□ -1.73
CD44-204ENST00000279452 C15orf56Q8N910 161 aa4.26□□□□□ -1.73
CD44-204ENST00000279452 C18orf32Q8TCD1 76 aa4.26□□□□□ -1.73
CD44-204ENST00000279452 LINC00526Q96FQ7 95 aa4.26□□□□□ -1.73
CD44-204ENST00000279452 PYGO1Q9Y3Y4 419 aa4.26□□□□□ -1.73
CD44-204ENST00000279452 DNAH10Q8IVF4 4471 aa4.25□□□□□ -1.73
CD44-204ENST00000279452 GVQW2A0A096LPI5 108 aaPredicted RBP4.25□□□□□ -1.73
CD44-204ENST00000279452 NDUFA6P56556 154 aa4.25□□□□□ -1.73
CD44-204ENST00000279452 RAB5BP61020 215 aa4.25□□□□□ -1.73
CD44-204ENST00000279452 SPAG11BQ08648 103 aa4.25□□□□□ -1.73
CD44-204ENST00000279452 PMCHL1Q16048 86 aa4.25□□□□□ -1.73
CD44-204ENST00000279452 TOMM6Q96B49 74 aa4.25□□□□□ -1.73
CD44-204ENST00000279452 DPH3Q96FX2 82 aa4.25□□□□□ -1.73
CD44-204ENST00000279452 IGHV3-64A0A075B6Q5 118 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 IGIPA6NJ69 53 aa4.24□□□□□ -1.73
CD44-204ENST00000279452 SCO1O75880 301 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms