RNA–Protein interactions for RNA: ENST00000274026.9

CCNA2-201, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-201ENST00000274026 FAM218AQ96MZ4 157 aa11.98□□□□□ -0.49
CCNA2-201ENST00000274026 IGHV3OR16-12A0A075B7B8 117 aa11.98□□□□□ -0.49
CCNA2-201ENST00000274026 PIK3CD-AS1Q5SR53 167 aa11.98□□□□□ -0.49
CCNA2-201ENST00000274026 GAGE2AQ6NT46 116 aa11.98□□□□□ -0.49
CCNA2-201ENST00000274026 KLK5Q9Y337 293 aaPredicted RBP11.98□□□□□ -0.49
CCNA2-201ENST00000274026 CSDC2Q9Y534 153 aaKnown RBP11.98□□□□□ -0.49
CCNA2-201ENST00000274026 LOC107984640A0A0U1RRK4 108 aa11.97□□□□□ -0.49
CCNA2-201ENST00000274026 PRM2P04554 102 aa11.97□□□□□ -0.49
CCNA2-201ENST00000274026 LINC00242Q5T6M2 205 aa11.97□□□□□ -0.49
CCNA2-201ENST00000274026 LRRC75A-AS1Q8N1F1 130 aa11.97□□□□□ -0.49
CCNA2-201ENST00000274026 C2orf48Q96LS8 159 aa11.97□□□□□ -0.49
CCNA2-201ENST00000274026 J3KT08 172 aa11.96□□□□□ -0.49
CCNA2-201ENST00000274026 IGHV3-53P01767 116 aa11.96□□□□□ -0.49
CCNA2-201ENST00000274026 PRIMA1Q86XR5 153 aa11.96□□□□□ -0.49
CCNA2-201ENST00000274026 A0A1B0GX51 115 aa11.96□□□□□ -0.5
CCNA2-201ENST00000274026 HIST1H4AP62805 103 aaKnown RBP11.96□□□□□ -0.5
CCNA2-201ENST00000274026 ZNF415Q09FC8 603 aa11.96□□□□□ -0.5
CCNA2-201ENST00000274026 SMIM1B2RUZ4 78 aa11.95□□□□□ -0.5
CCNA2-201ENST00000274026 CRYGAP11844 174 aa11.95□□□□□ -0.5
CCNA2-201ENST00000274026 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
CCNA2-201ENST00000274026 ATOX1O00244 68 aa11.95□□□□□ -0.5
CCNA2-201ENST00000274026 MALP21145 153 aa11.94□□□□□ -0.5
CCNA2-201ENST00000274026 HIST2H2BCQ6DN03 193 aa11.94□□□□□ -0.5
CCNA2-201ENST00000274026 HIST2H2BDQ6DRA6 164 aa11.94□□□□□ -0.5
CCNA2-201ENST00000274026 C10orf99Q6UWK7 81 aa11.94□□□□□ -0.5
CCNA2-201ENST00000274026 Q9HAA7 133 aa11.93□□□□□ -0.5
CCNA2-201ENST00000274026 IGHV4-61A0A0C4DH41 118 aa11.93□□□□□ -0.5
CCNA2-201ENST00000274026 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
CCNA2-201ENST00000274026 KLRB1Q12918 225 aa11.92□□□□□ -0.5
CCNA2-201ENST00000274026 RPL28P46779 137 aaKnown RBP11.91□□□□□ -0.5
CCNA2-201ENST00000274026 VPS13CQ709C8 3753 aa11.91□□□□□ -0.5
CCNA2-201ENST00000274026 PF4P02776 101 aa11.9□□□□□ -0.5
CCNA2-201ENST00000274026 TRAV13-2A0A0B4J235 113 aa11.9□□□□□ -0.5
CCNA2-201ENST00000274026 DEFB131AP59861 70 aa11.9□□□□□ -0.5
CCNA2-201ENST00000274026 FAM19A5Q7Z5A7 132 aaPredicted RBP11.9□□□□□ -0.5
CCNA2-201ENST00000274026 TRAV13-1A0A0B4J241 112 aa11.9□□□□□ -0.51
CCNA2-201ENST00000274026 RBMY1BA6NDE4 496 aaKnown RBP11.9□□□□□ -0.51
CCNA2-201ENST00000274026 RBMY1EA6NEQ0 496 aaKnown RBP11.9□□□□□ -0.51
CCNA2-201ENST00000274026 RBMY1DP0C7P1 496 aaKnown RBP11.9□□□□□ -0.51
CCNA2-201ENST00000274026 PIMREGQ9BSJ6 248 aa11.9□□□□□ -0.51
CCNA2-201ENST00000274026 hADV29S1A0JD25 119 aa11.89□□□□□ -0.51
CCNA2-201ENST00000274026 A8MTW9 85 aa11.89□□□□□ -0.51
CCNA2-201ENST00000274026 HOXD3P31249 432 aaPredicted RBP11.89□□□□□ -0.51
CCNA2-201ENST00000274026 RPS28P62857 69 aaKnown RBP11.89□□□□□ -0.51
CCNA2-201ENST00000274026 C5orf47Q569G3 176 aa11.89□□□□□ -0.51
CCNA2-201ENST00000274026 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.512e-7■■■■■ 29.7
CCNA2-201ENST00000274026 DNAL4O96015 105 aa11.89□□□□□ -0.51
CCNA2-201ENST00000274026 TMEM89A2RUT3 159 aa11.88□□□□□ -0.51
CCNA2-201ENST00000274026 RS1O15537 224 aa11.88□□□□□ -0.51
CCNA2-201ENST00000274026 CRPP02741 224 aa11.88□□□□□ -0.51
CCNA2-201ENST00000274026 RPL18AQ02543 176 aaKnown RBP11.88□□□□□ -0.51
CCNA2-201ENST00000274026 C11orf72Q8NBR9 251 aa11.88□□□□□ -0.51
CCNA2-201ENST00000274026 F5H768 121 aa11.88□□□□□ -0.51
CCNA2-201ENST00000274026 OVOL2Q9BRP0 275 aa11.88□□□□□ -0.51
CCNA2-201ENST00000274026 MAP1AP78559 2803 aaPredicted RBP11.87□□□□□ -0.51
CCNA2-201ENST00000274026 SMIM9A6NGZ8 99 aa11.86□□□□□ -0.51
CCNA2-201ENST00000274026 LINC00337Q8N6G1 96 aa11.85□□□□□ -0.51
CCNA2-201ENST00000274026 Q6JHZ5 121 aa11.85□□□□□ -0.51
CCNA2-201ENST00000274026 C14orf132Q9NPU4 83 aa11.85□□□□□ -0.51
CCNA2-201ENST00000274026 CYSTM1Q9H1C7 97 aa11.84□□□□□ -0.51
CCNA2-201ENST00000274026 HIVEP3Q5T1R4 2406 aa11.84□□□□□ -0.51
CCNA2-201ENST00000274026 IGKV3D-7A0A0C4DH55 119 aa11.84□□□□□ -0.51
CCNA2-201ENST00000274026 C9orf129Q5T035 196 aaKnown RBP11.84□□□□□ -0.51
CCNA2-201ENST00000274026 CREBBPQ92793 2442 aa11.84□□□□□ -0.51
CCNA2-201ENST00000274026 A0A087WYN8 130 aa11.84□□□□□ -0.51
CCNA2-201ENST00000274026 ITPR1Q14643 2758 aa11.83□□□□□ -0.52
CCNA2-201ENST00000274026 IGKV2-28A0A075B6P5 120 aa11.83□□□□□ -0.52
CCNA2-201ENST00000274026 IGKV2D-28P01615 120 aa11.83□□□□□ -0.52
CCNA2-201ENST00000274026 C10orf105Q8TEF2 133 aa11.83□□□□□ -0.52
CCNA2-201ENST00000274026 IGHV4-59P01825 116 aa11.83□□□□□ -0.52
CCNA2-201ENST00000274026 MSMBP08118 114 aa11.83□□□□□ -0.52
CCNA2-201ENST00000274026 SERP2Q8N6R1 65 aa11.83□□□□□ -0.52
CCNA2-201ENST00000274026 Q96MF0 132 aa11.83□□□□□ -0.52
CCNA2-201ENST00000274026 SND1-IT1Q9HBX3 110 aa11.83□□□□□ -0.52
CCNA2-201ENST00000274026 CDC42SE2Q9NRR3 84 aa11.83□□□□□ -0.52
CCNA2-201ENST00000274026 SMIM11BQ8TCY0 68 aa11.82□□□□□ -0.52
CCNA2-201ENST00000274026 OBSCN-AS1Q96MR7 158 aa11.82□□□□□ -0.52
CCNA2-201ENST00000274026 LINC00846Q9NV44 126 aa11.82□□□□□ -0.52
CCNA2-201ENST00000274026 AVPP01185 164 aa11.82□□□□□ -0.52
CCNA2-201ENST00000274026 MIR7-3HGQ8N6C7 128 aa11.82□□□□□ -0.52
CCNA2-201ENST00000274026 OR13C6PQ8NH95 151 aa11.82□□□□□ -0.52
CCNA2-201ENST00000274026 ATP5J2P56134 94 aa11.81□□□□□ -0.52
CCNA2-201ENST00000274026 TMEM258P61165 79 aa11.81□□□□□ -0.52
CCNA2-201ENST00000274026 NTM-AS1Q6ZSK4 140 aa11.81□□□□□ -0.52
CCNA2-201ENST00000274026 H0YGX0 51 aa11.81□□□□□ -0.52
CCNA2-201ENST00000274026 CSMD2Q7Z408 3487 aa11.81□□□□□ -0.52
CCNA2-201ENST00000274026 NBL1P41271 181 aa11.8□□□□□ -0.52
CCNA2-201ENST00000274026 RPL36AP83881 106 aaKnown RBP11.8□□□□□ -0.52
CCNA2-201ENST00000274026 RPL36ALQ969Q0 106 aaKnown RBP11.8□□□□□ -0.52
CCNA2-201ENST00000274026 C19orf84I3L1E1 186 aa11.79□□□□□ -0.52
CCNA2-201ENST00000274026 INSP01308 110 aa11.79□□□□□ -0.52
CCNA2-201ENST00000274026 UPK3BQ9BT76 320 aa11.79□□□□□ -0.52
CCNA2-201ENST00000274026 A0A087WVE0 104 aa11.79□□□□□ -0.52
CCNA2-201ENST00000274026 DPH3Q96FX2 82 aa11.79□□□□□ -0.52
CCNA2-201ENST00000274026 UBE2E2Q96LR5 201 aa11.79□□□□□ -0.52
CCNA2-201ENST00000274026 UCNP55089 124 aa11.78□□□□□ -0.52
CCNA2-201ENST00000274026 CSPG4Q6UVK1 2322 aa11.78□□□□□ -0.52
CCNA2-201ENST00000274026 IGHV4-30-2A0A087WSY4 118 aa11.78□□□□□ -0.52
CCNA2-201ENST00000274026 DEFB112Q30KQ8 113 aa11.78□□□□□ -0.52
CCNA2-201ENST00000274026 LINC01561Q8N1V8 128 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms