RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 C2orf82Q6UX34 121 aa12.37□□□□□ -0.43
SPG7-201ENST00000268704 CHCHD5Q9BSY4 110 aa12.37□□□□□ -0.43
SPG7-201ENST00000268704 A0A0U1RRA0 63 aa12.37□□□□□ -0.43
SPG7-201ENST00000268704 H3BMM0 161 aa12.37□□□□□ -0.43
SPG7-201ENST00000268704 M0QXV9 152 aa12.37□□□□□ -0.43
SPG7-201ENST00000268704 TINCRA0A1B0GVN0 87 aa12.36□□□□□ -0.43
SPG7-201ENST00000268704 SPANXDQ9BXN6 97 aa12.36□□□□□ -0.43
SPG7-201ENST00000268704 SPANXCQ9NY87 97 aa12.36□□□□□ -0.43
SPG7-201ENST00000268704 TEX15Q9BXT5 2789 aa12.36□□□□□ -0.43
SPG7-201ENST00000268704 MEIG1Q5JSS6 88 aa12.36□□□□□ -0.43
SPG7-201ENST00000268704 UBE2WQ96B02 151 aa12.36□□□□□ -0.43
SPG7-201ENST00000268704 ZNF625Q96I27 306 aaPredicted RBP12.36□□□□□ -0.43
SPG7-201ENST00000268704 RPL13AP40429 203 aaKnown RBP12.35□□□□□ -0.43
SPG7-201ENST00000268704 TMEM61Q8N0U2 210 aa12.35□□□□□ -0.43
SPG7-201ENST00000268704 TRAV8-4A0A0B4J246 113 aa12.35□□□□□ -0.43
SPG7-201ENST00000268704 ZNF702PQ9H963 129 aa12.35□□□□□ -0.43
SPG7-201ENST00000268704 EDA2RQ9HAV5 297 aa12.34□□□□□ -0.43
SPG7-201ENST00000268704 SONP18583 2426 aaKnown RBP12.34□□□□□ -0.43
SPG7-201ENST00000268704 COX6A2Q02221 97 aa12.34□□□□□ -0.43
SPG7-201ENST00000268704 JMJD1CQ15652 2540 aa12.34□□□□□ -0.43
SPG7-201ENST00000268704 NDUFA7O95182 113 aa12.34□□□□□ -0.43
SPG7-201ENST00000268704 RNF152Q8N8N0 203 aa12.33□□□□□ -0.44
SPG7-201ENST00000268704 LINC01587Q99440 93 aa12.33□□□□□ -0.44
SPG7-201ENST00000268704 SPANXA1Q9NS26 97 aa12.33□□□□□ -0.44
SPG7-201ENST00000268704 ZNF415Q09FC8 603 aa12.33□□□□□ -0.44
SPG7-201ENST00000268704 UBE2E2Q96LR5 201 aa12.33□□□□□ -0.44
SPG7-201ENST00000268704 PPDPFQ9H3Y8 114 aa12.32□□□□□ -0.44
SPG7-201ENST00000268704 VPREB3Q9UKI3 123 aa12.32□□□□□ -0.44
SPG7-201ENST00000268704 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.44
SPG7-201ENST00000268704 TMEM89A2RUT3 159 aa12.32□□□□□ -0.44
SPG7-201ENST00000268704 TMEM101Q96IK0 257 aa12.32□□□□□ -0.44
SPG7-201ENST00000268704 C11orf72Q8NBR9 251 aa12.31□□□□□ -0.44
SPG7-201ENST00000268704 ABCA12Q86UK0 2595 aa12.31□□□□□ -0.44
SPG7-201ENST00000268704 ZNF469Q96JG9 3925 aaPredicted RBP12.31□□□□□ -0.44
SPG7-201ENST00000268704 KHDC1LQ5JSQ8 128 aa12.31□□□□□ -0.44
SPG7-201ENST00000268704 IGHV3OR16-12A0A075B7B8 117 aa12.31□□□□□ -0.44
SPG7-201ENST00000268704 LINC01356Q8N9X3 169 aa12.31□□□□□ -0.44
SPG7-201ENST00000268704 COX6CP09669 75 aa12.3□□□□□ -0.44
SPG7-201ENST00000268704 LINC00694P0DN24 101 aa12.29□□□□□ -0.44
SPG7-201ENST00000268704 CITED2Q99967 270 aaPredicted RBP12.29□□□□□ -0.44
SPG7-201ENST00000268704 MAP6D1Q9H9H5 199 aa12.29□□□□□ -0.44
SPG7-201ENST00000268704 LST1O00453 97 aa12.29□□□□□ -0.44
SPG7-201ENST00000268704 IGHV3-53P01767 116 aa12.29□□□□□ -0.44
SPG7-201ENST00000268704 FAM110AQ9BQ89 295 aa12.29□□□□□ -0.44
SPG7-201ENST00000268704 NF1P21359 2839 aa12.29□□□□□ -0.44
SPG7-201ENST00000268704 DGAT2L7PQ6IED9 249 aa12.29□□□□□ -0.44
SPG7-201ENST00000268704 Q9H8V8 135 aa12.29□□□□□ -0.44
SPG7-201ENST00000268704 XCL2Q9UBD3 114 aa12.29□□□□□ -0.44
SPG7-201ENST00000268704 LRRK2Q5S007 2527 aa12.28□□□□□ -0.44
SPG7-201ENST00000268704 LINC01600Q96MT4 127 aa12.27□□□□□ -0.45
SPG7-201ENST00000268704 NDUFA1O15239 70 aa12.26□□□□□ -0.45
SPG7-201ENST00000268704 MRPL23Q16540 153 aaKnown RBP12.26□□□□□ -0.45
SPG7-201ENST00000268704 A0A096LNT2 108 aa12.26□□□□□ -0.45
SPG7-201ENST00000268704 A8MTW9 85 aa12.26□□□□□ -0.45
SPG7-201ENST00000268704 YAE1D1Q9NRH1 226 aa12.26□□□□□ -0.45
SPG7-201ENST00000268704 TRAV13-1A0A0B4J241 112 aa12.26□□□□□ -0.45
SPG7-201ENST00000268704 H3BT86 120 aa12.26□□□□□ -0.45
SPG7-201ENST00000268704 LINC00242Q5T6M2 205 aa12.25□□□□□ -0.45
SPG7-201ENST00000268704 SOSTDC1Q6X4U4 206 aa12.25□□□□□ -0.45
SPG7-201ENST00000268704 Q8N2B8 174 aa12.25□□□□□ -0.45
SPG7-201ENST00000268704 LINC00308Q8TCZ7 52 aa12.25□□□□□ -0.45
SPG7-201ENST00000268704 Q6YL49 198 aa12.25□□□□□ -0.45
SPG7-201ENST00000268704 DYNLRB2Q8TF09 96 aa12.24□□□□□ -0.45
SPG7-201ENST00000268704 NBPF19A0A087WUL8 3843 aa12.24□□□□□ -0.45
SPG7-201ENST00000268704 KLK5Q9Y337 293 aaPredicted RBP12.24□□□□□ -0.45
SPG7-201ENST00000268704 IGLV5-45A0A087WSX0 123 aa12.24□□□□□ -0.45
SPG7-201ENST00000268704 LOC107984640A0A0U1RRK4 108 aa12.24□□□□□ -0.45
SPG7-201ENST00000268704 CCDC168Q8NDH2 2452 aa12.23□□□□□ -0.45
SPG7-201ENST00000268704 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
SPG7-201ENST00000268704 RS1O15537 224 aa12.23□□□□□ -0.45
SPG7-201ENST00000268704 TIMM17BO60830 172 aa12.23□□□□□ -0.45
SPG7-201ENST00000268704 INSP01308 110 aa12.23□□□□□ -0.45
SPG7-201ENST00000268704 NAV2Q8IVL1 2488 aa12.23□□□□□ -0.45
SPG7-201ENST00000268704 TIRAPP58753 221 aa12.22□□□□□ -0.45
SPG7-201ENST00000268704 UBR5O95071 2799 aaPredicted RBP12.22□□□□□ -0.45
SPG7-201ENST00000268704 BEAN1Q3B7T3 259 aa12.22□□□□□ -0.45
SPG7-201ENST00000268704 CR1P17927 2039 aa12.22□□□□□ -0.45
SPG7-201ENST00000268704 SMIM1B2RUZ4 78 aa12.22□□□□□ -0.45
SPG7-201ENST00000268704 DNAJC30Q96LL9 226 aa12.22□□□□□ -0.45
SPG7-201ENST00000268704 HELZ2Q9BYK8 2649 aaKnown RBP12.21□□□□□ -0.45
SPG7-201ENST00000268704 CIRBPQ14011 172 aaKnown RBP12.21□□□□□ -0.45
SPG7-201ENST00000268704 C11orf44Q8N8P7 122 aa12.21□□□□□ -0.45
SPG7-201ENST00000268704 IGLV5-39A0A0G2JS06 123 aa12.21□□□□□ -0.46
SPG7-201ENST00000268704 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.46
SPG7-201ENST00000268704 SETXQ7Z333 2677 aaKnown RBP12.21□□□□□ -0.46
SPG7-201ENST00000268704 PIK3CD-AS1Q5SR53 167 aa12.2□□□□□ -0.46
SPG7-201ENST00000268704 PLA2G2AP14555 144 aa12.2□□□□□ -0.46
SPG7-201ENST00000268704 PEMTQ9UBM1 199 aa12.2□□□□□ -0.46
SPG7-201ENST00000268704 FAM236AA0A1B0GUQ0 79 aa12.19□□□□□ -0.46
SPG7-201ENST00000268704 FAM236BA0A1B0GV22 79 aa12.19□□□□□ -0.46
SPG7-201ENST00000268704 DSCR9P59020 149 aa12.19□□□□□ -0.46
SPG7-201ENST00000268704 HERVK_113P63121 156 aa12.19□□□□□ -0.46
SPG7-201ENST00000268704 DEFB114Q30KQ6 69 aa12.19□□□□□ -0.46
SPG7-201ENST00000268704 PRIMA1Q86XR5 153 aa12.19□□□□□ -0.46
SPG7-201ENST00000268704 ODF3L2Q3SX64 289 aa12.19□□□□□ -0.46
SPG7-201ENST00000268704 Q6ZTI0 123 aa12.19□□□□□ -0.46
SPG7-201ENST00000268704 C1orf158Q8N1D5 194 aa12.19□□□□□ -0.46
SPG7-201ENST00000268704 FASNP49327 2511 aaKnown RBP12.18□□□□□ -0.46
SPG7-201ENST00000268704 TENM4Q6N022 2769 aa12.18□□□□□ -0.46
SPG7-201ENST00000268704 J3QLI3 93 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms