RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 TRBV6-5A0A0K0K1A5 114 aa13.35□□□□□ -0.27
COL5A3-201ENST00000264828 WFDC13Q8IUB5 93 aa13.35□□□□□ -0.27
COL5A3-201ENST00000264828 CACNA1HO95180 2353 aa13.34□□□□□ -0.27
COL5A3-201ENST00000264828 BBC3Q96PG8 261 aaPredicted RBP13.34□□□□□ -0.27
COL5A3-201ENST00000264828 YPEL4Q96NS1 127 aa13.34□□□□□ -0.27
COL5A3-201ENST00000264828 LOC100131303A0A0U1RQF7 123 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 CCDC179H3BU77 68 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 PCNX2A6NKB5 2137 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 SMIM9A6NGZ8 99 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 TSHBP01222 138 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 SPINK6Q6UWN8 80 aa13.33□□□□□ -0.28
COL5A3-201ENST00000264828 C2orf91Q6ZV80 131 aa13.32□□□□□ -0.28
COL5A3-201ENST00000264828 PRM2P04554 102 aa13.32□□□□□ -0.28
COL5A3-201ENST00000264828 IGLV2-11P01706 119 aa13.32□□□□□ -0.28
COL5A3-201ENST00000264828 MED13LQ71F56 2210 aa13.32□□□□□ -0.28
COL5A3-201ENST00000264828 NDUFA7O95182 113 aa13.31□□□□□ -0.28
COL5A3-201ENST00000264828 HILS1P60008 231 aa13.31□□□□□ -0.28
COL5A3-201ENST00000264828 PRR9Q5T870 116 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 Q6ZS46 218 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 RBX1P62877 108 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 SYCNQ0VAF6 134 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 Q6ZQY7 126 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 NRACQ8N912 160 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 ZNF843Q8N446 348 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 FAM30AQ9NZY2 134 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.3□□□□□ -0.28
COL5A3-201ENST00000264828 KIR2DL5BQ8NHK3 375 aa13.3□□□□□ -0.28
COL5A3-201ENST00000264828 LY6LH3BQJ8 138 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 K7ERS5 55 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 SMIM11BQ8TCY0 68 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 RPL37AP8A6NKH3 93 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 TRBV6-4A0A1B0GX49 114 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 GAS8-AS1O95177 125 aa13.29□□□□□ -0.28
COL5A3-201ENST00000264828 INAFM1C9JVW0 142 aa13.28□□□□□ -0.28
COL5A3-201ENST00000264828 SERP2Q8N6R1 65 aa13.28□□□□□ -0.28
COL5A3-201ENST00000264828 IGHV4-30-4P0DP06 118 aa13.28□□□□□ -0.28
COL5A3-201ENST00000264828 PRR15LQ9BU68 103 aa13.28□□□□□ -0.28
COL5A3-201ENST00000264828 TRBV27A0A0K0K1C4 114 aa13.27□□□□□ -0.28
COL5A3-201ENST00000264828 WFDC10AQ9H1F0 79 aa13.27□□□□□ -0.28
COL5A3-201ENST00000264828 RNASE3P12724 160 aaKnown RBP13.27□□□□□ -0.28
COL5A3-201ENST00000264828 IGLV2-18A0A075B6J9 118 aa13.27□□□□□ -0.29
COL5A3-201ENST00000264828 C18orf65Q6ZTR6 163 aa13.27□□□□□ -0.29
COL5A3-201ENST00000264828 A6NED7 52 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 UBE2D4Q9Y2X8 147 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 C11orf21Q9P2W6 132 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 NCOA6Q14686 2063 aaPredicted RBP13.26□□□□□ -0.29
COL5A3-201ENST00000264828 Q6ZSV7 163 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 FAM19A3Q7Z5A8 133 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 V9GYY9 64 aa13.26□□□□□ -0.29
COL5A3-201ENST00000264828 CEP192Q8TEP8 1941 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 LST1O00453 97 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 IL17DQ8TAD2 202 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 PYGO1Q9Y3Y4 419 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 TNCP24821 2201 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 XGP55808 180 aa13.25□□□□□ -0.29
COL5A3-201ENST00000264828 TIMM17BO60830 172 aa13.24□□□□□ -0.29
COL5A3-201ENST00000264828 MIFP14174 115 aa13.24□□□□□ -0.29
COL5A3-201ENST00000264828 POM121L12Q8N7R1 296 aa13.24□□□□□ -0.29
COL5A3-201ENST00000264828 M0R2N4 97 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 C11orf71Q6IPW1 123 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 C9orf85Q96MD7 179 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 CREBBPQ92793 2442 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 IGLV9-49A0A0B4J1Y8 123 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 LINC00959A0A1B0GUT2 108 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 CLUHP3Q96NS8 147 aa13.23□□□□□ -0.29
COL5A3-201ENST00000264828 CD164L2Q6UWJ8 174 aa13.22□□□□□ -0.29
COL5A3-201ENST00000264828 M0R378 163 aa13.22□□□□□ -0.29
COL5A3-201ENST00000264828 UBE2D1P51668 147 aa13.21□□□□□ -0.29
COL5A3-201ENST00000264828 ATP5EP56381 51 aaPredicted RBP13.21□□□□□ -0.29
COL5A3-201ENST00000264828 EBI3Q14213 229 aa13.21□□□□□ -0.29
COL5A3-201ENST00000264828 KIAA1549Q9HCM3 1950 aa13.21□□□□□ -0.3
COL5A3-201ENST00000264828 NDUFC1O43677 76 aa13.2□□□□□ -0.3
COL5A3-201ENST00000264828 COX7CP15954 63 aa13.2□□□□□ -0.3
COL5A3-201ENST00000264828 DHRS4-AS1Q9P1J3 65 aa13.2□□□□□ -0.3
COL5A3-201ENST00000264828 ZNF702PQ9H963 129 aa13.19□□□□□ -0.3
COL5A3-201ENST00000264828 LINC00694P0DN24 101 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 C7orf33Q8WU49 177 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 TANC2Q9HCD6 1990 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 CELA1Q9UNI1 258 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 ALPK3Q96L96 1907 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 IMUPQ9GZP8 106 aa13.18□□□□□ -0.3
COL5A3-201ENST00000264828 KPRPQ5T749 579 aaPredicted RBP13.17□□□□□ -0.3
COL5A3-201ENST00000264828 FREM1Q5H8C1 2179 aa13.17□□□□□ -0.3
COL5A3-201ENST00000264828 Q8N9L7 120 aa13.17□□□□□ -0.3
COL5A3-201ENST00000264828 FSTL3O95633 263 aa13.16□□□□□ -0.3
COL5A3-201ENST00000264828 IGLV4-69A0A075B6H9 119 aa13.16□□□□□ -0.3
COL5A3-201ENST00000264828 ZNF73O43830 326 aaPredicted RBP13.16□□□□□ -0.3
COL5A3-201ENST00000264828 LY6G6DO95868 133 aa13.15□□□□□ -0.3
COL5A3-201ENST00000264828 TRAV10A0A0B4J240 114 aa13.15□□□□□ -0.3
COL5A3-201ENST00000264828 PTPRSQ13332 1948 aa13.14□□□□□ -0.31
COL5A3-201ENST00000264828 SERP1Q9Y6X1 66 aa13.14□□□□□ -0.31
COL5A3-201ENST00000264828 KLLNB2CW77 178 aa13.14□□□□□ -0.31
COL5A3-201ENST00000264828 POLR2KP53803 58 aaKnown RBP13.14□□□□□ -0.31
COL5A3-201ENST00000264828 PLAC8L1A1L4L8 177 aa13.14□□□□□ -0.31
COL5A3-201ENST00000264828 MRPS36P82909 103 aaKnown RBP13.13□□□□□ -0.31
COL5A3-201ENST00000264828 LELP1Q5T871 98 aa13.13□□□□□ -0.31
COL5A3-201ENST00000264828 EDN2P20800 178 aa13.13□□□□□ -0.31
COL5A3-201ENST00000264828 LOC107984640A0A0U1RRK4 108 aa13.12□□□□□ -0.31
COL5A3-201ENST00000264828 CRIP2P52943 208 aaPredicted RBP13.12□□□□□ -0.31
COL5A3-201ENST00000264828 PSMG3-AS1Q96PY0 264 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms