RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 CHCHD5Q9BSY4 110 aa13.02□□□□□ -0.33
TRAF4-201ENST00000262395 DGAT2L7PQ6IED9 249 aa13.02□□□□□ -0.33
TRAF4-201ENST00000262395 FAM208BQ5VWN6 2430 aa13.02□□□□□ -0.33
TRAF4-201ENST00000262395 CHD6Q8TD26 2715 aa13.01□□□□□ -0.33
TRAF4-201ENST00000262395 KHDC1LQ5JSQ8 128 aa13.01□□□□□ -0.33
TRAF4-201ENST00000262395 TMEM101Q96IK0 257 aa13.01□□□□□ -0.33
TRAF4-201ENST00000262395 ACACBO00763 2458 aa13□□□□□ -0.33
TRAF4-201ENST00000262395 SPANXA1Q9NS26 97 aa12.99□□□□□ -0.33
TRAF4-201ENST00000262395 DOPEY1Q5JWR5 2465 aa12.99□□□□□ -0.33
TRAF4-201ENST00000262395 SETD2Q9BYW2 2564 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-201ENST00000262395 CACNA1AO00555 2505 aa12.99□□□□□ -0.33
TRAF4-201ENST00000262395 Q9H8V8 135 aa12.99□□□□□ -0.33
TRAF4-201ENST00000262395 TEX15Q9BXT5 2789 aa12.99□□□□□ -0.33
TRAF4-201ENST00000262395 ZNF415Q09FC8 603 aa12.99□□□□□ -0.33
TRAF4-201ENST00000262395 CITED2Q99967 270 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-201ENST00000262395 LST1O00453 97 aa12.98□□□□□ -0.33
TRAF4-201ENST00000262395 PIEZO1Q92508 2521 aa12.98□□□□□ -0.33
TRAF4-201ENST00000262395 IGHV3-53P01767 116 aa12.97□□□□□ -0.33
TRAF4-201ENST00000262395 XCL2Q9UBD3 114 aa12.97□□□□□ -0.33
TRAF4-201ENST00000262395 TRAV13-1A0A0B4J241 112 aa12.97□□□□□ -0.33
TRAF4-201ENST00000262395 LINC00694P0DN24 101 aa12.97□□□□□ -0.33
TRAF4-201ENST00000262395 Q6Q795 121 aa12.96□□□□□ -0.33
TRAF4-201ENST00000262395 UBE2E2Q96LR5 201 aa12.96□□□□□ -0.33
TRAF4-201ENST00000262395 NIPBLQ6KC79 2804 aaeCLIP12.96□□□□□ -0.332e-8■■■□□ 17.1
TRAF4-201ENST00000262395 ZNF702PQ9H963 129 aa12.96□□□□□ -0.33
TRAF4-201ENST00000262395 EPG5Q9HCE0 2579 aa12.96□□□□□ -0.34
TRAF4-201ENST00000262395 YAE1D1Q9NRH1 226 aa12.95□□□□□ -0.34
TRAF4-201ENST00000262395 TMEM89A2RUT3 159 aa12.95□□□□□ -0.34
TRAF4-201ENST00000262395 Q8N2B8 174 aa12.95□□□□□ -0.34
TRAF4-201ENST00000262395 ABCA12Q86UK0 2595 aa12.95□□□□□ -0.34
TRAF4-201ENST00000262395 JMJD1CQ15652 2540 aa12.95□□□□□ -0.34
TRAF4-201ENST00000262395 H3BT86 120 aa12.95□□□□□ -0.34
TRAF4-201ENST00000262395 C11orf72Q8NBR9 251 aa12.94□□□□□ -0.34
TRAF4-201ENST00000262395 LINC00308Q8TCZ7 52 aa12.94□□□□□ -0.34
TRAF4-201ENST00000262395 SONP18583 2426 aaKnown RBP12.94□□□□□ -0.34
TRAF4-201ENST00000262395 PTPN13Q12923 2485 aa12.94□□□□□ -0.34
TRAF4-201ENST00000262395 EDA2RQ9HAV5 297 aa12.94□□□□□ -0.34
TRAF4-201ENST00000262395 PPDPFQ9H3Y8 114 aa12.93□□□□□ -0.34
TRAF4-201ENST00000262395 VPREB3Q9UKI3 123 aa12.93□□□□□ -0.34
TRAF4-201ENST00000262395 NDUFA1O15239 70 aa12.93□□□□□ -0.34
TRAF4-201ENST00000262395 SOSTDC1Q6X4U4 206 aa12.93□□□□□ -0.34
TRAF4-201ENST00000262395 MAP6D1Q9H9H5 199 aa12.93□□□□□ -0.34
TRAF4-201ENST00000262395 NF1P21359 2839 aa12.93□□□□□ -0.34
TRAF4-201ENST00000262395 LINC00242Q5T6M2 205 aa12.92□□□□□ -0.34
TRAF4-201ENST00000262395 CIRBPQ14011 172 aaKnown RBP12.92□□□□□ -0.34
TRAF4-201ENST00000262395 LINC01356Q8N9X3 169 aa12.92□□□□□ -0.34
TRAF4-201ENST00000262395 IGSF10Q6WRI0 2623 aa12.92□□□□□ -0.34
TRAF4-201ENST00000262395 RNF152Q8N8N0 203 aa12.92□□□□□ -0.34
TRAF4-201ENST00000262395 TRGV1A0A0A0MS02 117 aa12.91□□□□□ -0.34
TRAF4-201ENST00000262395 DYNLRB2Q8TF09 96 aa12.91□□□□□ -0.34
TRAF4-201ENST00000262395 PRORYQ9H606 182 aa12.91□□□□□ -0.34
TRAF4-201ENST00000262395 AKAP9Q99996 3911 aa12.91□□□□□ -0.34
TRAF4-201ENST00000262395 C11orf44Q8N8P7 122 aa12.9□□□□□ -0.34
TRAF4-201ENST00000262395 PRIMA1Q86XR5 153 aa12.9□□□□□ -0.34
TRAF4-201ENST00000262395 LINC01600Q96MT4 127 aa12.9□□□□□ -0.34
TRAF4-201ENST00000262395 ZFYVE26Q68DK2 2539 aa12.9□□□□□ -0.35
TRAF4-201ENST00000262395 LRRK2Q5S007 2527 aa12.89□□□□□ -0.35
TRAF4-201ENST00000262395 PIK3CD-AS1Q5SR53 167 aa12.89□□□□□ -0.35
TRAF4-201ENST00000262395 FAM236AA0A1B0GUQ0 79 aa12.88□□□□□ -0.35
TRAF4-201ENST00000262395 FAM236BA0A1B0GV22 79 aa12.88□□□□□ -0.35
TRAF4-201ENST00000262395 TIRAPP58753 221 aa12.88□□□□□ -0.35
TRAF4-201ENST00000262395 TIMM17BO60830 172 aa12.88□□□□□ -0.35
TRAF4-201ENST00000262395 INSP01308 110 aa12.88□□□□□ -0.35
TRAF4-201ENST00000262395 NAV2Q8IVL1 2488 aa12.87□□□□□ -0.35
TRAF4-201ENST00000262395 IGKV3OR2-268A0A0C4DH90 116 aa12.87□□□□□ -0.35
TRAF4-201ENST00000262395 SMIM1B2RUZ4 78 aa12.87□□□□□ -0.35
TRAF4-201ENST00000262395 RS1O15537 224 aa12.87□□□□□ -0.35
TRAF4-201ENST00000262395 IGLV5-45A0A087WSX0 123 aa12.86□□□□□ -0.35
TRAF4-201ENST00000262395 NTM-AS1Q6ZSK4 140 aa12.86□□□□□ -0.35
TRAF4-201ENST00000262395 HERVK_113P63121 156 aa12.86□□□□□ -0.35
TRAF4-201ENST00000262395 Q6ZTI0 123 aa12.86□□□□□ -0.35
TRAF4-201ENST00000262395 DNAJC30Q96LL9 226 aa12.86□□□□□ -0.35
TRAF4-201ENST00000262395 Q6YL49 198 aa12.85□□□□□ -0.35
TRAF4-201ENST00000262395 IGLV5-39A0A0G2JS06 123 aa12.85□□□□□ -0.35
TRAF4-201ENST00000262395 A0A1W2PRX2 142 aa12.85□□□□□ -0.35
TRAF4-201ENST00000262395 BEAN1Q3B7T3 259 aa12.85□□□□□ -0.35
TRAF4-201ENST00000262395 A8MTW9 85 aa12.84□□□□□ -0.35
TRAF4-201ENST00000262395 COX7A2LO14548 114 aa12.84□□□□□ -0.35
TRAF4-201ENST00000262395 FAM218AQ96MZ4 157 aa12.84□□□□□ -0.35
TRAF4-201ENST00000262395 Q9HAA7 133 aa12.84□□□□□ -0.35
TRAF4-201ENST00000262395 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
TRAF4-201ENST00000262395 DEFB114Q30KQ6 69 aa12.83□□□□□ -0.36
TRAF4-201ENST00000262395 DAZ4Q86SG3 579 aaKnown RBP12.83□□□□□ -0.36
TRAF4-201ENST00000262395 DAZ3Q9NR90 486 aaKnown RBP12.83□□□□□ -0.36
TRAF4-201ENST00000262395 SMCR5Q8TEV8 140 aa12.83□□□□□ -0.36
TRAF4-201ENST00000262395 PEMTQ9UBM1 199 aa12.83□□□□□ -0.36
TRAF4-201ENST00000262395 C1orf158Q8N1D5 194 aa12.82□□□□□ -0.36
TRAF4-201ENST00000262395 Q96MF0 132 aa12.82□□□□□ -0.36
TRAF4-201ENST00000262395 DEFB121Q5J5C9 76 aa12.82□□□□□ -0.36
TRAF4-201ENST00000262395 TMEM126AQ9H061 195 aa12.82□□□□□ -0.36
TRAF4-201ENST00000262395 TOMM7Q9P0U1 55 aa12.82□□□□□ -0.36
TRAF4-201ENST00000262395 BAALC-AS2P0C853 105 aa12.82□□□□□ -0.36
TRAF4-201ENST00000262395 ODF3L2Q3SX64 289 aa12.82□□□□□ -0.36
TRAF4-201ENST00000262395 C9orf153Q5TBE3 101 aa12.82□□□□□ -0.36
TRAF4-201ENST00000262395 A0A096LNT2 108 aa12.81□□□□□ -0.36
TRAF4-201ENST00000262395 LOC107984640A0A0U1RRK4 108 aa12.81□□□□□ -0.36
TRAF4-201ENST00000262395 RPL36AP83881 106 aaKnown RBP12.81□□□□□ -0.36
TRAF4-201ENST00000262395 STHQ8IWL8 128 aa12.81□□□□□ -0.36
TRAF4-201ENST00000262395 RPL36ALQ969Q0 106 aaKnown RBP12.81□□□□□ -0.36
TRAF4-201ENST00000262395 LOC100131303A0A0U1RQF7 123 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms