RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 XCL2Q9UBD3 114 aa11.73□□□□□ -0.53
PRPF40B-201ENST00000261897 MAPK1IP1LQ8NDC0 245 aa11.73□□□□□ -0.53
PRPF40B-201ENST00000261897 WFDC9Q8NEX5 89 aa11.73□□□□□ -0.53
PRPF40B-201ENST00000261897 TRGV1A0A0A0MS02 117 aa11.73□□□□□ -0.53
PRPF40B-201ENST00000261897 TIRAPP58753 221 aa11.73□□□□□ -0.53
PRPF40B-201ENST00000261897 LINC00643Q86TS7 51 aa11.73□□□□□ -0.53
PRPF40B-201ENST00000261897 UQCRQO14949 82 aa11.72□□□□□ -0.53
PRPF40B-201ENST00000261897 SIRPDQ9H106 197 aa11.72□□□□□ -0.53
PRPF40B-201ENST00000261897 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.54
PRPF40B-201ENST00000261897 CSDC2Q9Y534 153 aaKnown RBP11.71□□□□□ -0.54
PRPF40B-201ENST00000261897 KIR2DL5BQ8NHK3 375 aa11.69□□□□□ -0.54
PRPF40B-201ENST00000261897 SMCR5Q8TEV8 140 aa11.69□□□□□ -0.54
PRPF40B-201ENST00000261897 APRG1Q8IVJ8 170 aa11.69□□□□□ -0.54
PRPF40B-201ENST00000261897 DYNLRB2Q8TF09 96 aa11.69□□□□□ -0.54
PRPF40B-201ENST00000261897 COX7A2LO14548 114 aa11.68□□□□□ -0.54
PRPF40B-201ENST00000261897 LECT2O14960 151 aa11.68□□□□□ -0.54
PRPF40B-201ENST00000261897 U3KQE9 123 aa11.68□□□□□ -0.54
PRPF40B-201ENST00000261897 INAFM2P0DMQ5 153 aa11.68□□□□□ -0.54
PRPF40B-201ENST00000261897 NCR3O14931 201 aa11.68□□□□□ -0.54
PRPF40B-201ENST00000261897 TRAV23DV6A0A075B6W5 121 aa11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 MED14OSP0DP75 135 aa11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 EBI3Q14213 229 aa11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 HRCT1Q6UXD1 115 aa11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 PIP4P1Q86T03 277 aa11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 USMG5Q96IX5 58 aa11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 COL27A1Q8IZC6 1860 aaPredicted RBP11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 RPL36AP83881 106 aaKnown RBP11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 COX6A2Q02221 97 aa11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 C10orf105Q8TEF2 133 aa11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 RPL36ALQ969Q0 106 aaKnown RBP11.67□□□□□ -0.54
PRPF40B-201ENST00000261897 ITPR1Q14643 2758 aa11.66□□□□□ -0.54
PRPF40B-201ENST00000261897 KLLNB2CW77 178 aa11.66□□□□□ -0.54
PRPF40B-201ENST00000261897 A0A0J9YX75 114 aa11.66□□□□□ -0.54
PRPF40B-201ENST00000261897 SMIM9A6NGZ8 99 aa11.66□□□□□ -0.54
PRPF40B-201ENST00000261897 DNAJC30Q96LL9 226 aa11.66□□□□□ -0.54
PRPF40B-201ENST00000261897 ACYP1P07311 99 aa11.65□□□□□ -0.54
PRPF40B-201ENST00000261897 Q6ZSN1 163 aa11.65□□□□□ -0.54
PRPF40B-201ENST00000261897 MIR7-3HGQ8N6C7 128 aa11.65□□□□□ -0.54
PRPF40B-201ENST00000261897 SPANXA1Q9NS26 97 aa11.65□□□□□ -0.54
PRPF40B-201ENST00000261897 A0A1W2PRX2 142 aa11.65□□□□□ -0.55
PRPF40B-201ENST00000261897 CLPSL2Q6UWE3 100 aa11.64□□□□□ -0.55
PRPF40B-201ENST00000261897 TRBV6-5A0A0K0K1A5 114 aa11.64□□□□□ -0.55
PRPF40B-201ENST00000261897 C5orf38Q86SI9 138 aa11.64□□□□□ -0.55
PRPF40B-201ENST00000261897 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
PRPF40B-201ENST00000261897 COX7CP15954 63 aa11.64□□□□□ -0.55
PRPF40B-201ENST00000261897 MALP21145 153 aa11.64□□□□□ -0.55
PRPF40B-201ENST00000261897 C5orf47Q569G3 176 aa11.64□□□□□ -0.55
PRPF40B-201ENST00000261897 CITED2Q99967 270 aaPredicted RBP11.64□□□□□ -0.55
PRPF40B-201ENST00000261897 A0A1W2PPR1 153 aa11.63□□□□□ -0.55
PRPF40B-201ENST00000261897 SOCS3O14543 225 aa11.63□□□□□ -0.55
PRPF40B-201ENST00000261897 ATOX1O00244 68 aa11.63□□□□□ -0.55
PRPF40B-201ENST00000261897 MRPS36P82909 103 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-201ENST00000261897 TRGV2A0A075B6R0 118 aa11.62□□□□□ -0.55
PRPF40B-201ENST00000261897 IGF2-ASQ6U949 168 aa11.62□□□□□ -0.55
PRPF40B-201ENST00000261897 FAM218AQ96MZ4 157 aa11.62□□□□□ -0.55
PRPF40B-201ENST00000261897 LITAFQ99732 161 aa11.62□□□□□ -0.55
PRPF40B-201ENST00000261897 ZNF415Q09FC8 603 aa11.62□□□□□ -0.55
PRPF40B-201ENST00000261897 COPS9Q8WXC6 57 aa11.62□□□□□ -0.55
PRPF40B-201ENST00000261897 ACANP16112 2415 aa11.62□□□□□ -0.55
PRPF40B-201ENST00000261897 SPANXDQ9BXN6 97 aa11.61□□□□□ -0.55
PRPF40B-201ENST00000261897 SPANXCQ9NY87 97 aa11.61□□□□□ -0.55
PRPF40B-201ENST00000261897 LY6DQ14210 128 aa11.61□□□□□ -0.55
PRPF40B-201ENST00000261897 C20orf197Q8N268 126 aa11.61□□□□□ -0.55
PRPF40B-201ENST00000261897 IGHV4-59P01825 116 aa11.61□□□□□ -0.55
PRPF40B-201ENST00000261897 DCANP1Q8TF63 244 aa11.6□□□□□ -0.55
PRPF40B-201ENST00000261897 NRGNQ92686 78 aa11.6□□□□□ -0.55
PRPF40B-201ENST00000261897 IGHV4-61A0A0C4DH41 118 aa11.6□□□□□ -0.55
PRPF40B-201ENST00000261897 TRBV7-7A0A0K0K1E9 115 aa11.6□□□□□ -0.55
PRPF40B-201ENST00000261897 C9orf85Q96MD7 179 aa11.6□□□□□ -0.55
PRPF40B-201ENST00000261897 NBEAL2Q6ZNJ1 2754 aa11.6□□□□□ -0.55
PRPF40B-201ENST00000261897 FAM240AA0A1B0GVK7 77 aa11.6□□□□□ -0.55
PRPF40B-201ENST00000261897 UBE2D4Q9Y2X8 147 aa11.6□□□□□ -0.55
PRPF40B-201ENST00000261897 HRNRQ86YZ3 2850 aaPredicted RBP11.6□□□□□ -0.55
PRPF40B-201ENST00000261897 LINC00526Q96FQ7 95 aa11.59□□□□□ -0.55
PRPF40B-201ENST00000261897 LMO4P61968 165 aa11.59□□□□□ -0.55
PRPF40B-201ENST00000261897 HAMPP81172 84 aa11.59□□□□□ -0.55
PRPF40B-201ENST00000261897 SLURP1P55000 103 aa11.59□□□□□ -0.55
PRPF40B-201ENST00000261897 SOSTDC1Q6X4U4 206 aa11.59□□□□□ -0.55
PRPF40B-201ENST00000261897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-201ENST00000261897 HILS1P60008 231 aa11.58□□□□□ -0.56
PRPF40B-201ENST00000261897 C4orf26Q17RF5 130 aa11.58□□□□□ -0.56
PRPF40B-201ENST00000261897 ZANQ9Y493 2812 aa11.58□□□□□ -0.56
PRPF40B-201ENST00000261897 C6orf226Q5I0X4 101 aa11.58□□□□□ -0.56
PRPF40B-201ENST00000261897 A0A087WYN8 130 aa11.57□□□□□ -0.56
PRPF40B-201ENST00000261897 PIMREGQ9BSJ6 248 aa11.57□□□□□ -0.56
PRPF40B-201ENST00000261897 USP17L23D6RBM5 183 aa11.57□□□□□ -0.56
PRPF40B-201ENST00000261897 ADORA2A-AS1P86434 159 aa11.57□□□□□ -0.56
PRPF40B-201ENST00000261897 CHD6Q8TD26 2715 aa11.57□□□□□ -0.56
PRPF40B-201ENST00000261897 C1orf43Q9BWL3 253 aa11.56□□□□□ -0.56
PRPF40B-201ENST00000261897 A0A096LPF7 62 aa11.56□□□□□ -0.56
PRPF40B-201ENST00000261897 NDUFA1O15239 70 aa11.56□□□□□ -0.56
PRPF40B-201ENST00000261897 GHRHP01286 108 aa11.56□□□□□ -0.56
PRPF40B-201ENST00000261897 LINC00846Q9NV44 126 aa11.55□□□□□ -0.56
PRPF40B-201ENST00000261897 HIST2H2BCQ6DN03 193 aa11.55□□□□□ -0.56
PRPF40B-201ENST00000261897 F8P00451 2351 aa11.55□□□□□ -0.56
PRPF40B-201ENST00000261897 RBMY1BA6NDE4 496 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-201ENST00000261897 RBMY1EA6NEQ0 496 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-201ENST00000261897 RBMY1DP0C7P1 496 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-201ENST00000261897 RBMY1A1P0DJD3 496 aaKnown RBP11.55□□□□□ -0.56
PRPF40B-201ENST00000261897 RBMY1CP0DJD4 496 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms