RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ADAMTSL4-AS1Q5T5F5 129 aa10.58□□□□□ -0.72
SFSWAP-201ENST00000261674 TRAV26-1A0A087WT03 109 aa10.57□□□□□ -0.72
SFSWAP-201ENST00000261674 UBE2E2Q96LR5 201 aa10.57□□□□□ -0.72
SFSWAP-201ENST00000261674 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
SFSWAP-201ENST00000261674 ESM1Q9NQ30 184 aa10.56□□□□□ -0.72
SFSWAP-201ENST00000261674 XCL2Q9UBD3 114 aa10.56□□□□□ -0.72
SFSWAP-201ENST00000261674 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.56□□□□□ -0.72
SFSWAP-201ENST00000261674 TEX49A0A1B0GTD5 131 aa10.56□□□□□ -0.72
SFSWAP-201ENST00000261674 IGHV3-53P01767 116 aa10.56□□□□□ -0.72
SFSWAP-201ENST00000261674 DYNLRB2Q8TF09 96 aa10.56□□□□□ -0.72
SFSWAP-201ENST00000261674 TENM1Q9UKZ4 2725 aa10.55□□□□□ -0.72
SFSWAP-201ENST00000261674 M0R2P5 195 aa10.55□□□□□ -0.72
SFSWAP-201ENST00000261674 TRIAP1O43715 76 aa10.55□□□□□ -0.72
SFSWAP-201ENST00000261674 ODF3Q96PU9 254 aa10.55□□□□□ -0.72
SFSWAP-201ENST00000261674 ANK3Q12955 4377 aaKnown RBP10.55□□□□□ -0.72
SFSWAP-201ENST00000261674 LINC01620Q4KN68 170 aa10.54□□□□□ -0.72
SFSWAP-201ENST00000261674 CLEC2BQ92478 149 aa10.54□□□□□ -0.72
SFSWAP-201ENST00000261674 LINC00467Q9BRT7 94 aa10.54□□□□□ -0.72
SFSWAP-201ENST00000261674 H3BMM0 161 aa10.54□□□□□ -0.72
SFSWAP-201ENST00000261674 J3QLI3 93 aa10.54□□□□□ -0.72
SFSWAP-201ENST00000261674 ATXN8Q156A1 80 aa10.54□□□□□ -0.72
SFSWAP-201ENST00000261674 RBMY1BA6NDE4 496 aaKnown RBP10.53□□□□□ -0.72
SFSWAP-201ENST00000261674 RBMY1EA6NEQ0 496 aaKnown RBP10.53□□□□□ -0.72
SFSWAP-201ENST00000261674 RBMY1DP0C7P1 496 aaKnown RBP10.53□□□□□ -0.72
SFSWAP-201ENST00000261674 CLUHP3Q96NS8 147 aa10.53□□□□□ -0.72
SFSWAP-201ENST00000261674 VPREB3Q9UKI3 123 aa10.53□□□□□ -0.72
SFSWAP-201ENST00000261674 Q6YL49 198 aa10.53□□□□□ -0.72
SFSWAP-201ENST00000261674 CDKN2A-AS1Q9UH64 79 aa10.53□□□□□ -0.72
SFSWAP-201ENST00000261674 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.72
SFSWAP-201ENST00000261674 DNAJC9-AS1A6NH13 148 aa10.52□□□□□ -0.73
SFSWAP-201ENST00000261674 C2orf82Q6UX34 121 aa10.52□□□□□ -0.73
SFSWAP-201ENST00000261674 TRAV13-1A0A0B4J241 112 aa10.52□□□□□ -0.73
SFSWAP-201ENST00000261674 A0A0B4J2C4 111 aa10.52□□□□□ -0.73
SFSWAP-201ENST00000261674 ZNF415Q09FC8 603 aa10.52□□□□□ -0.73
SFSWAP-201ENST00000261674 TEX29Q8N6K0 151 aa10.52□□□□□ -0.73
SFSWAP-201ENST00000261674 NDUFA7O95182 113 aa10.51□□□□□ -0.73
SFSWAP-201ENST00000261674 COX6CP09669 75 aa10.51□□□□□ -0.73
SFSWAP-201ENST00000261674 RNF183Q96D59 192 aa10.51□□□□□ -0.73
SFSWAP-201ENST00000261674 ANAPC13Q9BS18 74 aa10.51□□□□□ -0.73
SFSWAP-201ENST00000261674 MRPS36P82909 103 aaKnown RBP10.5□□□□□ -0.73
SFSWAP-201ENST00000261674 FAM104AQ969W3 186 aa10.5□□□□□ -0.73
SFSWAP-201ENST00000261674 ZNF702PQ9H963 129 aa10.5□□□□□ -0.73
SFSWAP-201ENST00000261674 TRGV1A0A0A0MS02 117 aa10.5□□□□□ -0.73
SFSWAP-201ENST00000261674 TMEM262E9PQX1 116 aa10.5□□□□□ -0.73
SFSWAP-201ENST00000261674 ZFAND6Q6FIF0 208 aa10.5□□□□□ -0.73
SFSWAP-201ENST00000261674 VSIG2Q96IQ7 327 aa10.5□□□□□ -0.73
SFSWAP-201ENST00000261674 SNCGO76070 127 aa10.5□□□□□ -0.73
SFSWAP-201ENST00000261674 ICOSQ9Y6W8 199 aa10.5□□□□□ -0.73
SFSWAP-201ENST00000261674 IGKV3OR2-268A0A0C4DH90 116 aa10.49□□□□□ -0.73
SFSWAP-201ENST00000261674 CHCHD7Q9BUK0 85 aa10.49□□□□□ -0.73
SFSWAP-201ENST00000261674 STAB1Q9NY15 2570 aa10.49□□□□□ -0.73
SFSWAP-201ENST00000261674 VWFP04275 2813 aa10.49□□□□□ -0.73
SFSWAP-201ENST00000261674 RPL13AP40429 203 aaKnown RBP10.49□□□□□ -0.73
SFSWAP-201ENST00000261674 UBE2D4Q9Y2X8 147 aa10.49□□□□□ -0.73
SFSWAP-201ENST00000261674 COL6A5A8TX70 2615 aa10.48□□□□□ -0.73
SFSWAP-201ENST00000261674 SBSPONQ8IVN8 264 aa10.48□□□□□ -0.73
SFSWAP-201ENST00000261674 PYGO1Q9Y3Y4 419 aa10.48□□□□□ -0.73
SFSWAP-201ENST00000261674 CRLF1O75462 422 aa10.48□□□□□ -0.73
SFSWAP-201ENST00000261674 LITAFQ99732 161 aa10.48□□□□□ -0.73
SFSWAP-201ENST00000261674 NBEAL2Q6ZNJ1 2754 aa10.47□□□□□ -0.73
SFSWAP-201ENST00000261674 TRAV4A0A0B4J268 109 aa10.47□□□□□ -0.73
SFSWAP-201ENST00000261674 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
SFSWAP-201ENST00000261674 GAGE2EQ4V326 116 aa10.47□□□□□ -0.73
SFSWAP-201ENST00000261674 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
SFSWAP-201ENST00000261674 TRAV8-4A0A0B4J246 113 aa10.47□□□□□ -0.73
SFSWAP-201ENST00000261674 Q9H8V8 135 aa10.47□□□□□ -0.73
SFSWAP-201ENST00000261674 MAP6D1Q9H9H5 199 aa10.47□□□□□ -0.73
SFSWAP-201ENST00000261674 FSHBP01225 129 aa10.46□□□□□ -0.73
SFSWAP-201ENST00000261674 COX6A2Q02221 97 aa10.46□□□□□ -0.73
SFSWAP-201ENST00000261674 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.46□□□□□ -0.73
SFSWAP-201ENST00000261674 MIAQ16674 131 aa10.46□□□□□ -0.73
SFSWAP-201ENST00000261674 MEIG1Q5JSS6 88 aa10.46□□□□□ -0.73
SFSWAP-201ENST00000261674 UBE2WQ96B02 151 aa10.46□□□□□ -0.73
SFSWAP-201ENST00000261674 TINCRA0A1B0GVN0 87 aa10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 TMEM89A2RUT3 159 aa10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 SPANXA1Q9NS26 97 aa10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 TRRAPQ9Y4A5 3859 aa10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 TRBV30A0A0K0K1B3 111 aa10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 TRBV10-2A0A0K0K1G8 114 aa10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 TMEM101Q96IK0 257 aa10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 PEMTQ9UBM1 199 aa10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 INSP01308 110 aa10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 CIRBPQ14011 172 aaKnown RBP10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 TTC32Q5I0X7 151 aa10.45□□□□□ -0.74
SFSWAP-201ENST00000261674 GAGE12JA6NER3 117 aa10.44□□□□□ -0.74
SFSWAP-201ENST00000261674 LINC00694P0DN24 101 aa10.44□□□□□ -0.74
SFSWAP-201ENST00000261674 GAGE4Q13068 117 aa10.44□□□□□ -0.74
SFSWAP-201ENST00000261674 GAGE5Q13069 117 aa10.44□□□□□ -0.74
SFSWAP-201ENST00000261674 STHQ8IWL8 128 aa10.44□□□□□ -0.74
SFSWAP-201ENST00000261674 H7C423 109 aa10.44□□□□□ -0.74
SFSWAP-201ENST00000261674 C15orf53Q8NAA6 179 aa10.44□□□□□ -0.74
SFSWAP-201ENST00000261674 PRIMA1Q86XR5 153 aa10.43□□□□□ -0.74
SFSWAP-201ENST00000261674 FBN1P35555 2871 aaKnown RBP10.43□□□□□ -0.74
SFSWAP-201ENST00000261674 Q6ZTI0 123 aa10.42□□□□□ -0.74
SFSWAP-201ENST00000261674 TOMM7Q9P0U1 55 aa10.42□□□□□ -0.74
SFSWAP-201ENST00000261674 B5MCH6 92 aa10.41□□□□□ -0.74
SFSWAP-201ENST00000261674 DEFB114Q30KQ6 69 aa10.41□□□□□ -0.74
SFSWAP-201ENST00000261674 C11orf72Q8NBR9 251 aa10.41□□□□□ -0.74
SFSWAP-201ENST00000261674 SPANXDQ9BXN6 97 aa10.4□□□□□ -0.74
SFSWAP-201ENST00000261674 SPANXCQ9NY87 97 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms