RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 CLUHP3Q96NS8 147 aa13.78□□□□□ -0.2
LPCAT3-201ENST00000261407 CRYBA4P53673 196 aa13.78□□□□□ -0.2
LPCAT3-201ENST00000261407 NPC2P61916 151 aa13.78□□□□□ -0.2
LPCAT3-201ENST00000261407 VSIG2Q96IQ7 327 aa13.78□□□□□ -0.2
LPCAT3-201ENST00000261407 CDKN2A-AS1Q9UH64 79 aa13.78□□□□□ -0.2
LPCAT3-201ENST00000261407 TSSC4Q9Y5U2 329 aaPredicted RBP13.78□□□□□ -0.2
LPCAT3-201ENST00000261407 UNC79Q9P2D8 2635 aa13.77□□□□□ -0.2
LPCAT3-201ENST00000261407 COX6A2Q02221 97 aa13.77□□□□□ -0.21
LPCAT3-201ENST00000261407 NOP10Q9NPE3 64 aaKnown RBP13.77□□□□□ -0.21
LPCAT3-201ENST00000261407 NDUFA12Q9UI09 145 aa13.77□□□□□ -0.21
LPCAT3-201ENST00000261407 RPL35AP18077 110 aaKnown RBP13.76□□□□□ -0.21
LPCAT3-201ENST00000261407 TMEM238C9JI98 176 aa13.76□□□□□ -0.21
LPCAT3-201ENST00000261407 PRSS2P07478 247 aa13.76□□□□□ -0.21
LPCAT3-201ENST00000261407 NTM-AS1Q6ZSK4 140 aa13.76□□□□□ -0.21
LPCAT3-201ENST00000261407 IGHV3-33P01772 117 aa13.75□□□□□ -0.21
LPCAT3-201ENST00000261407 SCGB1C2P0DMR2 95 aa13.75□□□□□ -0.21
LPCAT3-201ENST00000261407 GEMIN7Q9H840 131 aaKnown RBP13.75□□□□□ -0.21
LPCAT3-201ENST00000261407 FASNP49327 2511 aaKnown RBP13.74□□□□□ -0.21
LPCAT3-201ENST00000261407 DGAT2L7PQ6IED9 249 aa13.74□□□□□ -0.21
LPCAT3-201ENST00000261407 SMR3AQ99954 134 aa13.74□□□□□ -0.21
LPCAT3-201ENST00000261407 GAGE12JA6NER3 117 aa13.73□□□□□ -0.21
LPCAT3-201ENST00000261407 GAGE4Q13068 117 aa13.73□□□□□ -0.21
LPCAT3-201ENST00000261407 GAGE5Q13069 117 aa13.73□□□□□ -0.21
LPCAT3-201ENST00000261407 TEX29Q8N6K0 151 aa13.73□□□□□ -0.21
LPCAT3-201ENST00000261407 DAND5Q8N907 189 aa13.73□□□□□ -0.21
LPCAT3-201ENST00000261407 RNASE1P07998 156 aaKnown RBP13.73□□□□□ -0.21
LPCAT3-201ENST00000261407 GTSF1LQ9H1H1 148 aa13.73□□□□□ -0.21
LPCAT3-201ENST00000261407 PLAC8L1A1L4L8 177 aa13.72□□□□□ -0.21
LPCAT3-201ENST00000261407 K7EQD1 137 aa13.72□□□□□ -0.21
LPCAT3-201ENST00000261407 C19orf73Q9NVV2 129 aa13.72□□□□□ -0.21
LPCAT3-201ENST00000261407 LOC100131303A0A0U1RQF7 123 aa13.71□□□□□ -0.21
LPCAT3-201ENST00000261407 TMEM101Q96IK0 257 aa13.71□□□□□ -0.21
LPCAT3-201ENST00000261407 ERG28Q9UKR5 140 aa13.71□□□□□ -0.21
LPCAT3-201ENST00000261407 A0A0B4J2C4 111 aa13.7□□□□□ -0.22
LPCAT3-201ENST00000261407 GAGE12HA6NDE8 117 aa13.7□□□□□ -0.22
LPCAT3-201ENST00000261407 GAGE7O76087 117 aa13.7□□□□□ -0.22
LPCAT3-201ENST00000261407 GAGE12FP0CL80 117 aa13.7□□□□□ -0.22
LPCAT3-201ENST00000261407 GAGE12GP0CL81 117 aa13.7□□□□□ -0.22
LPCAT3-201ENST00000261407 GAGE12IP0CL82 117 aa13.7□□□□□ -0.22
LPCAT3-201ENST00000261407 FOXI1Q12951 378 aa13.7□□□□□ -0.22
LPCAT3-201ENST00000261407 LINC00242Q5T6M2 205 aa13.7□□□□□ -0.22
LPCAT3-201ENST00000261407 VWFP04275 2813 aa13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 TRAV13-1A0A0B4J241 112 aa13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 IGLV1-51P01701 117 aa13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 RPL36AP83881 106 aaKnown RBP13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 RPL36ALQ969Q0 106 aaKnown RBP13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 C1QTNF4Q9BXJ3 329 aa13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 C16orf95Q9H693 158 aa13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 NBEAL2Q6ZNJ1 2754 aa13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 FN1P02751 2386 aaKnown RBP13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 Q1RN00 199 aa13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 ZFAND6Q6FIF0 208 aa13.69□□□□□ -0.22
LPCAT3-201ENST00000261407 TRAV4A0A0B4J268 109 aa13.68□□□□□ -0.22
LPCAT3-201ENST00000261407 ZNF625Q96I27 306 aaPredicted RBP13.68□□□□□ -0.22
LPCAT3-201ENST00000261407 TRBV20-1A0A075B6N2 111 aa13.67□□□□□ -0.22
LPCAT3-201ENST00000261407 J3QR89 54 aa13.67□□□□□ -0.22
LPCAT3-201ENST00000261407 LYRM7Q5U5X0 104 aa13.67□□□□□ -0.22
LPCAT3-201ENST00000261407 CARD19Q96LW7 228 aa13.67□□□□□ -0.22
LPCAT3-201ENST00000261407 IGLV5-45A0A087WSX0 123 aa13.66□□□□□ -0.22
LPCAT3-201ENST00000261407 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.66□□□□□ -0.22
LPCAT3-201ENST00000261407 A0A0U1RRA0 63 aa13.66□□□□□ -0.22
LPCAT3-201ENST00000261407 TIRAPP58753 221 aa13.66□□□□□ -0.22
LPCAT3-201ENST00000261407 CSNK1G2-AS1Q8NCQ2 148 aa13.66□□□□□ -0.22
LPCAT3-201ENST00000261407 TRGV2A0A075B6R0 118 aa13.66□□□□□ -0.22
LPCAT3-201ENST00000261407 MIAQ16674 131 aa13.66□□□□□ -0.22
LPCAT3-201ENST00000261407 GCN1Q92616 2671 aaKnown RBP13.66□□□□□ -0.22
LPCAT3-201ENST00000261407 HIVEP2P31629 2446 aa13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 NOTCH2Q04721 2471 aa13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 SPANXDQ9BXN6 97 aa13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 SPANXCQ9NY87 97 aa13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 HECTD1Q9ULT8 2610 aa13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 TRBV10-1A0A0K0K1A3 114 aa13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 SMAGPQ0VAQ4 97 aa13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 DAZ2Q13117 558 aaKnown RBP13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 DAZ4Q86SG3 579 aaKnown RBP13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 SBSPONQ8IVN8 264 aa13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 DAZ3Q9NR90 486 aaKnown RBP13.65□□□□□ -0.22
LPCAT3-201ENST00000261407 TRIAP1O43715 76 aa13.64□□□□□ -0.23
LPCAT3-201ENST00000261407 KRTAP10-3P60369 221 aa13.64□□□□□ -0.23
LPCAT3-201ENST00000261407 C9JAW5 83 aa13.64□□□□□ -0.23
LPCAT3-201ENST00000261407 SPATA25Q9BR10 227 aa13.64□□□□□ -0.23
LPCAT3-201ENST00000261407 CDC42SE2Q9NRR3 84 aa13.64□□□□□ -0.23
LPCAT3-201ENST00000261407 SIGMAR1Q99720 223 aa13.63□□□□□ -0.23
LPCAT3-201ENST00000261407 Q9H8V8 135 aa13.63□□□□□ -0.23
LPCAT3-201ENST00000261407 C16orf74Q96GX8 76 aa13.62□□□□□ -0.23
LPCAT3-201ENST00000261407 HILS1P60008 231 aa13.62□□□□□ -0.23
LPCAT3-201ENST00000261407 HERVK_113P63121 156 aa13.62□□□□□ -0.23
LPCAT3-201ENST00000261407 TEN1Q86WV5 123 aa13.62□□□□□ -0.23
LPCAT3-201ENST00000261407 ANKRD29Q8N6D5 301 aa13.62□□□□□ -0.23
LPCAT3-201ENST00000261407 ATP6V0E2Q8NHE4 81 aa13.62□□□□□ -0.23
LPCAT3-201ENST00000261407 SMIM1B2RUZ4 78 aa13.61□□□□□ -0.23
LPCAT3-201ENST00000261407 NDUFA1O15239 70 aa13.61□□□□□ -0.23
LPCAT3-201ENST00000261407 KMT2BQ9UMN6 2715 aaPredicted RBP13.61□□□□□ -0.23
LPCAT3-201ENST00000261407 IGLV5-39A0A0G2JS06 123 aa13.61□□□□□ -0.23
LPCAT3-201ENST00000261407 SLC25A20O43772 301 aa13.61□□□□□ -0.23
LPCAT3-201ENST00000261407 OTOGQ6ZRI0 2925 aa13.6□□□□□ -0.23
LPCAT3-201ENST00000261407 CSDC2Q9Y534 153 aaKnown RBP13.6□□□□□ -0.23
LPCAT3-201ENST00000261407 J3QKU1 62 aa13.59□□□□□ -0.23
LPCAT3-201ENST00000261407 TRGV4A0A0C4DH28 118 aa13.58□□□□□ -0.24
LPCAT3-201ENST00000261407 SPATA3Q8NHX4 192 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms