RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
TMEM258-201ENST00000257262 TMEM242Q9NWH2 141 aa5.62□□□□□ -1.51
TMEM258-201ENST00000257262 IGLV10-54A0A075B6I4 117 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 TRBV24-1A0A075B6N3 115 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 IGLV5-52A0A0A0MRZ9 124 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 D6R8Y8 96 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 H7C423 109 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 TNFRSF6BO95407 300 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 FGF6P10767 208 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 GCSHP23434 173 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 C10orf91Q5T1B1 145 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 AMMECR1LQ6DCA0 310 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 RNASEKQ6P5S7 137 aaKnown RBP5.61□□□□□ -1.51
TMEM258-201ENST00000257262 KRTAP26-1Q6PEX3 210 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 NTN5Q8WTR8 489 aaPredicted RBP5.61□□□□□ -1.51
TMEM258-201ENST00000257262 CTDSP1Q9GZU7 261 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 ABCA13Q86UQ4 5058 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 DYNC1H1Q14204 4646 aaKnown RBP5.61□□□□□ -1.51
TMEM258-201ENST00000257262 PKHD1P08F94 4074 aa5.61□□□□□ -1.51
TMEM258-201ENST00000257262 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.6□□□□□ -1.51
TMEM258-201ENST00000257262 TRAV8-4A0A0B4J246 113 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 CDK2AP2O75956 126 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 NPYP01303 97 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 HLA-DQA1P01909 254 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 FCER1GP30273 86 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 KRTAP10-1P60331 282 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 TMEM136Q6ZRR5 245 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 BTF3L4Q96K17 158 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 IMMP2LQ96T52 175 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 KIR2DL4Q99706 377 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 C20orf78Q9BR46 151 aa5.6□□□□□ -1.51
TMEM258-201ENST00000257262 IGKV3OR2-268A0A0C4DH90 116 aa5.59□□□□□ -1.51
TMEM258-201ENST00000257262 PPBPP02775 128 aa5.59□□□□□ -1.51
TMEM258-201ENST00000257262 ZNF25P17030 456 aaPredicted RBP5.59□□□□□ -1.51
TMEM258-201ENST00000257262 ORMDL3Q8N138 153 aa5.59□□□□□ -1.51
TMEM258-201ENST00000257262 TMEM101Q96IK0 257 aa5.59□□□□□ -1.51
TMEM258-201ENST00000257262 PRELID3AQ96N28 172 aa5.59□□□□□ -1.51
TMEM258-201ENST00000257262 C7orf77A4D0Y5 90 aa5.58□□□□□ -1.52
TMEM258-201ENST00000257262 PHOX2AO14813 284 aa5.58□□□□□ -1.52
TMEM258-201ENST00000257262 RPL32P62910 135 aaKnown RBP5.58□□□□□ -1.52
TMEM258-201ENST00000257262 MRPL52Q86TS9 123 aaKnown RBP5.58□□□□□ -1.52
TMEM258-201ENST00000257262 SMIM2Q9BVW6 85 aa5.58□□□□□ -1.52
TMEM258-201ENST00000257262 CARHSP1Q9Y2V2 147 aaKnown RBP5.58□□□□□ -1.52
TMEM258-201ENST00000257262 USP17L23D6RBM5 183 aa5.57□□□□□ -1.52
TMEM258-201ENST00000257262 TCAPO15273 167 aa5.57□□□□□ -1.52
TMEM258-201ENST00000257262 XGP55808 180 aa5.57□□□□□ -1.52
TMEM258-201ENST00000257262 DGAT2L7PQ6IED9 249 aa5.57□□□□□ -1.52
TMEM258-201ENST00000257262 ZNF664Q8N3J9 261 aa5.57□□□□□ -1.52
TMEM258-201ENST00000257262 OR5A1Q8NGJ0 315 aa5.57□□□□□ -1.52
TMEM258-201ENST00000257262 RPS10P5Q9NQ39 176 aa5.57□□□□□ -1.52
TMEM258-201ENST00000257262 CDC42SE2Q9NRR3 84 aa5.57□□□□□ -1.52
TMEM258-201ENST00000257262 UBE2D4Q9Y2X8 147 aa5.57□□□□□ -1.52
TMEM258-201ENST00000257262 TRAV9-1A0A075B6T8 112 aa5.56□□□□□ -1.52
TMEM258-201ENST00000257262 LOC389332A0A1B0GUA5 103 aa5.56□□□□□ -1.52
TMEM258-201ENST00000257262 GAGE12HA6NDE8 117 aa5.56□□□□□ -1.52
TMEM258-201ENST00000257262 PRSS1P07477 247 aa5.56□□□□□ -1.52
TMEM258-201ENST00000257262 MALP21145 153 aa5.56□□□□□ -1.52
TMEM258-201ENST00000257262 S100PP25815 95 aa5.56□□□□□ -1.52
TMEM258-201ENST00000257262 RHEBQ15382 184 aa5.56□□□□□ -1.52
TMEM258-201ENST00000257262 LINC01620Q4KN68 170 aa5.56□□□□□ -1.52
TMEM258-201ENST00000257262 C14orf177Q52M58 125 aa5.56□□□□□ -1.52
TMEM258-201ENST00000257262 TMEM18Q96B42 140 aa5.56□□□□□ -1.52
TMEM258-201ENST00000257262 CSDC2Q9Y534 153 aaKnown RBP5.56□□□□□ -1.52
TMEM258-201ENST00000257262 DNAH5Q8TE73 4624 aa5.55□□□□□ -1.52
TMEM258-201ENST00000257262 LINC00959A0A1B0GUT2 108 aa5.55□□□□□ -1.52
TMEM258-201ENST00000257262 SCGB1D1O95968 90 aa5.55□□□□□ -1.52
TMEM258-201ENST00000257262 APOC3P02656 99 aa5.55□□□□□ -1.52
TMEM258-201ENST00000257262 RPL39P62891 51 aaKnown RBP5.55□□□□□ -1.52
TMEM258-201ENST00000257262 KIAA1644Q3SXP7 199 aa5.55□□□□□ -1.52
TMEM258-201ENST00000257262 CHCHD10Q8WYQ3 142 aaPredicted RBP5.55□□□□□ -1.52
TMEM258-201ENST00000257262 MAP1LC3AQ9H492 121 aa5.55□□□□□ -1.52
TMEM258-201ENST00000257262 FAM30AQ9NZY2 134 aa5.55□□□□□ -1.52
TMEM258-201ENST00000257262 LAMTOR2Q9Y2Q5 125 aa5.55□□□□□ -1.52
TMEM258-201ENST00000257262 CCL25O15444 150 aa5.54□□□□□ -1.52
TMEM258-201ENST00000257262 RAB5AP20339 215 aa5.54□□□□□ -1.52
TMEM258-201ENST00000257262 SMAGPQ0VAQ4 97 aa5.54□□□□□ -1.52
TMEM258-201ENST00000257262 SS18Q15532 418 aa5.54□□□□□ -1.52
TMEM258-201ENST00000257262 RNASE13Q5GAN3 156 aaKnown RBP5.54□□□□□ -1.52
TMEM258-201ENST00000257262 Q8N8P6 123 aa5.54□□□□□ -1.52
TMEM258-201ENST00000257262 TIMM21Q9BVV7 248 aa5.54□□□□□ -1.52
TMEM258-201ENST00000257262 GNB1LQ9BYB4 327 aa5.54□□□□□ -1.52
TMEM258-201ENST00000257262 LRP1BQ9NZR2 4599 aa5.53□□□□□ -1.52
TMEM258-201ENST00000257262 hDV102S1A0JD36 115 aa5.53□□□□□ -1.52
TMEM258-201ENST00000257262 XCL1P47992 114 aa5.53□□□□□ -1.52
TMEM258-201ENST00000257262 HAMPP81172 84 aa5.53□□□□□ -1.52
TMEM258-201ENST00000257262 FOXI1Q12951 378 aa5.53□□□□□ -1.52
TMEM258-201ENST00000257262 Q6ZUT4 128 aa5.53□□□□□ -1.52
TMEM258-201ENST00000257262 Q8N1X5 172 aa5.53□□□□□ -1.52
TMEM258-201ENST00000257262 FAM104AQ969W3 186 aa5.53□□□□□ -1.52
TMEM258-201ENST00000257262 OPRPNQ99935 248 aaPredicted RBP5.53□□□□□ -1.52
TMEM258-201ENST00000257262 KRTAP4-5Q9BYR2 181 aa5.53□□□□□ -1.52
TMEM258-201ENST00000257262 TGIF2-C20orf24A0A0A6YYL0 155 aa5.52□□□□□ -1.53
TMEM258-201ENST00000257262 C1orf196B1AJZ1 125 aa5.52□□□□□ -1.53
TMEM258-201ENST00000257262 SNAPINO95295 136 aa5.52□□□□□ -1.53
TMEM258-201ENST00000257262 SMR3BP02814 79 aaPredicted RBP5.52□□□□□ -1.53
TMEM258-201ENST00000257262 IFI27P40305 119 aaPredicted RBP5.52□□□□□ -1.53
TMEM258-201ENST00000257262 NDUFA5Q16718 116 aa5.52□□□□□ -1.53
TMEM258-201ENST00000257262 COX19Q49B96 90 aa5.52□□□□□ -1.53
TMEM258-201ENST00000257262 SVBPQ8N300 66 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms