RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 COX6CP09669 75 aa12.28□□□□□ -0.44
SLC52A1-201ENST00000254853 KRTAP10-9P60411 292 aa12.28□□□□□ -0.44
SLC52A1-201ENST00000254853 CITED1Q99966 193 aa12.28□□□□□ -0.44
SLC52A1-201ENST00000254853 MYO18BQ8IUG5 2567 aa12.28□□□□□ -0.44
SLC52A1-201ENST00000254853 TRAV26-1A0A087WT03 109 aa12.28□□□□□ -0.44
SLC52A1-201ENST00000254853 IFITM1P13164 125 aa12.28□□□□□ -0.44
SLC52A1-201ENST00000254853 LINC00694P0DN24 101 aa12.27□□□□□ -0.44
SLC52A1-201ENST00000254853 ODF3L2Q3SX64 289 aa12.27□□□□□ -0.44
SLC52A1-201ENST00000254853 UBE2WQ96B02 151 aa12.27□□□□□ -0.44
SLC52A1-201ENST00000254853 TRGV1A0A0A0MS02 117 aa12.27□□□□□ -0.45
SLC52A1-201ENST00000254853 LINC00242Q5T6M2 205 aa12.27□□□□□ -0.45
SLC52A1-201ENST00000254853 C1orf158Q8N1D5 194 aa12.27□□□□□ -0.45
SLC52A1-201ENST00000254853 NDUFA7O95182 113 aa12.26□□□□□ -0.45
SLC52A1-201ENST00000254853 Q9H8V8 135 aa12.26□□□□□ -0.45
SLC52A1-201ENST00000254853 TRAV8-4A0A0B4J246 113 aa12.25□□□□□ -0.45
SLC52A1-201ENST00000254853 IGLV5-39A0A0G2JS06 123 aa12.25□□□□□ -0.45
SLC52A1-201ENST00000254853 PRB1P04280 392 aa12.25□□□□□ -0.45
SLC52A1-201ENST00000254853 TEX29Q8N6K0 151 aa12.25□□□□□ -0.45
SLC52A1-201ENST00000254853 ZNF625Q96I27 306 aaPredicted RBP12.25□□□□□ -0.45
SLC52A1-201ENST00000254853 LST1O00453 97 aa12.25□□□□□ -0.45
SLC52A1-201ENST00000254853 HERVK_113P63121 156 aa12.25□□□□□ -0.45
SLC52A1-201ENST00000254853 CITED2Q99967 270 aaPredicted RBP12.25□□□□□ -0.45
SLC52A1-201ENST00000254853 CRLF1O75462 422 aa12.24□□□□□ -0.45
SLC52A1-201ENST00000254853 CIRBPQ14011 172 aaKnown RBP12.24□□□□□ -0.45
SLC52A1-201ENST00000254853 STHQ8IWL8 128 aa12.24□□□□□ -0.45
SLC52A1-201ENST00000254853 IL17DQ8TAD2 202 aa12.24□□□□□ -0.45
SLC52A1-201ENST00000254853 A0A0U1RRA0 63 aa12.23□□□□□ -0.45
SLC52A1-201ENST00000254853 H3BT86 120 aa12.23□□□□□ -0.45
SLC52A1-201ENST00000254853 LINC00308Q8TCZ7 52 aa12.23□□□□□ -0.45
SLC52A1-201ENST00000254853 CLUHP3Q96NS8 147 aa12.23□□□□□ -0.45
SLC52A1-201ENST00000254853 CHD6Q8TD26 2715 aa12.23□□□□□ -0.45
SLC52A1-201ENST00000254853 NTM-AS1Q6ZSK4 140 aa12.23□□□□□ -0.45
SLC52A1-201ENST00000254853 FAM208BQ5VWN6 2430 aa12.23□□□□□ -0.45
SLC52A1-201ENST00000254853 TRAV13-1A0A0B4J241 112 aa12.22□□□□□ -0.45
SLC52A1-201ENST00000254853 TRAV4A0A0B4J268 109 aa12.22□□□□□ -0.45
SLC52A1-201ENST00000254853 SNCGO76070 127 aa12.22□□□□□ -0.45
SLC52A1-201ENST00000254853 Q6ZTI0 123 aa12.22□□□□□ -0.45
SLC52A1-201ENST00000254853 SMIM1B2RUZ4 78 aa12.22□□□□□ -0.45
SLC52A1-201ENST00000254853 K7EQD1 137 aa12.21□□□□□ -0.45
SLC52A1-201ENST00000254853 RPL36AP83881 106 aaKnown RBP12.21□□□□□ -0.45
SLC52A1-201ENST00000254853 C11orf44Q8N8P7 122 aa12.21□□□□□ -0.45
SLC52A1-201ENST00000254853 RPL36ALQ969Q0 106 aaKnown RBP12.21□□□□□ -0.45
SLC52A1-201ENST00000254853 ANAPC13Q9BS18 74 aa12.21□□□□□ -0.45
SLC52A1-201ENST00000254853 A0A1W2PRX2 142 aa12.21□□□□□ -0.46
SLC52A1-201ENST00000254853 DEFB113Q30KQ7 82 aa12.21□□□□□ -0.46
SLC52A1-201ENST00000254853 Q96MF0 132 aa12.21□□□□□ -0.46
SLC52A1-201ENST00000254853 CENPEQ02224 2701 aa12.21□□□□□ -0.46
SLC52A1-201ENST00000254853 MYO9AB2RTY4 2548 aa12.21□□□□□ -0.46
SLC52A1-201ENST00000254853 ZFYVE26Q68DK2 2539 aa12.21□□□□□ -0.46
SLC52A1-201ENST00000254853 FAM19A3Q7Z5A8 133 aa12.2□□□□□ -0.46
SLC52A1-201ENST00000254853 TEX15Q9BXT5 2789 aa12.2□□□□□ -0.46
SLC52A1-201ENST00000254853 GAGE2BQ13066 116 aa12.2□□□□□ -0.46
SLC52A1-201ENST00000254853 GAGE2EQ4V326 116 aa12.2□□□□□ -0.46
SLC52A1-201ENST00000254853 SOSTDC1Q6X4U4 206 aa12.2□□□□□ -0.46
SLC52A1-201ENST00000254853 GAGE2DQ9UEU5 116 aa12.2□□□□□ -0.46
SLC52A1-201ENST00000254853 GAGE12JA6NER3 117 aa12.19□□□□□ -0.46
SLC52A1-201ENST00000254853 GAGE4Q13068 117 aa12.19□□□□□ -0.46
SLC52A1-201ENST00000254853 GAGE5Q13069 117 aa12.19□□□□□ -0.46
SLC52A1-201ENST00000254853 PTPN13Q12923 2485 aa12.19□□□□□ -0.46
SLC52A1-201ENST00000254853 TRAV25A0A0B4J276 109 aa12.19□□□□□ -0.46
SLC52A1-201ENST00000254853 TRBV10-1A0A0K0K1A3 114 aa12.19□□□□□ -0.46
SLC52A1-201ENST00000254853 CSDC2Q9Y534 153 aaKnown RBP12.19□□□□□ -0.46
SLC52A1-201ENST00000254853 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
SLC52A1-201ENST00000254853 DAZ4Q86SG3 579 aaKnown RBP12.18□□□□□ -0.46
SLC52A1-201ENST00000254853 C15orf53Q8NAA6 179 aa12.18□□□□□ -0.46
SLC52A1-201ENST00000254853 DAZ3Q9NR90 486 aaKnown RBP12.18□□□□□ -0.46
SLC52A1-201ENST00000254853 PRIMA1Q86XR5 153 aa12.18□□□□□ -0.46
SLC52A1-201ENST00000254853 CDC42SE2Q9NRR3 84 aa12.18□□□□□ -0.46
SLC52A1-201ENST00000254853 F5H768 121 aa12.17□□□□□ -0.46
SLC52A1-201ENST00000254853 NAV2Q8IVL1 2488 aa12.17□□□□□ -0.46
SLC52A1-201ENST00000254853 MEIG1Q5JSS6 88 aa12.16□□□□□ -0.46
SLC52A1-201ENST00000254853 NOP10Q9NPE3 64 aaKnown RBP12.16□□□□□ -0.46
SLC52A1-201ENST00000254853 NHLRC4P0CG21 123 aaPredicted RBP12.15□□□□□ -0.46
SLC52A1-201ENST00000254853 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
SLC52A1-201ENST00000254853 LRRK2Q5S007 2527 aa12.15□□□□□ -0.46
SLC52A1-201ENST00000254853 AKAP9Q99996 3911 aa12.15□□□□□ -0.46
SLC52A1-201ENST00000254853 CCL24O00175 119 aa12.15□□□□□ -0.46
SLC52A1-201ENST00000254853 ZNF462Q96JM2 2506 aa12.15□□□□□ -0.46
SLC52A1-201ENST00000254853 ABCA12Q86UK0 2595 aa12.14□□□□□ -0.47
SLC52A1-201ENST00000254853 COX7A2LO14548 114 aa12.14□□□□□ -0.47
SLC52A1-201ENST00000254853 NDUFV3P56181 108 aaKnown RBP12.14□□□□□ -0.47
SLC52A1-201ENST00000254853 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
SLC52A1-201ENST00000254853 SHISA2Q6UWI4 295 aa12.13□□□□□ -0.47
SLC52A1-201ENST00000254853 KRTAP1-3Q8IUG1 177 aa12.13□□□□□ -0.47
SLC52A1-201ENST00000254853 LRRC75A-AS1Q8N1F1 130 aa12.13□□□□□ -0.47
SLC52A1-201ENST00000254853 TMEM86BQ8N661 226 aa12.13□□□□□ -0.47
SLC52A1-201ENST00000254853 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
SLC52A1-201ENST00000254853 COPS9Q8WXC6 57 aa12.13□□□□□ -0.47
SLC52A1-201ENST00000254853 BBC3Q96PG8 261 aaPredicted RBP12.13□□□□□ -0.47
SLC52A1-201ENST00000254853 GIG44P09565 113 aaPredicted RBP12.12□□□□□ -0.47
SLC52A1-201ENST00000254853 Q6Q795 121 aa12.12□□□□□ -0.47
SLC52A1-201ENST00000254853 TMEM243Q9BU79 118 aa12.12□□□□□ -0.47
SLC52A1-201ENST00000254853 WNK1Q9H4A3 2382 aa12.12□□□□□ -0.47
SLC52A1-201ENST00000254853 LOC100131303A0A0U1RQF7 123 aa12.12□□□□□ -0.47
SLC52A1-201ENST00000254853 UBE2L6O14933 153 aa12.12□□□□□ -0.47
SLC52A1-201ENST00000254853 FAM240AA0A1B0GVK7 77 aa12.11□□□□□ -0.47
SLC52A1-201ENST00000254853 HERV-K104P63124 156 aa12.11□□□□□ -0.47
SLC52A1-201ENST00000254853 PLAC8L1A1L4L8 177 aa12.1□□□□□ -0.47
SLC52A1-201ENST00000254853 GAGE7O76087 117 aa12.1□□□□□ -0.47
SLC52A1-201ENST00000254853 GAGE12FP0CL80 117 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms