RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FAT2Q9NYQ8 4349 aa9.46□□□□□ -0.89
VPS25-201ENST00000253794 MIAQ16674 131 aa9.46□□□□□ -0.9
VPS25-201ENST00000253794 C1orf134Q5TEV5 83 aa9.46□□□□□ -0.9
VPS25-201ENST00000253794 RNASEKQ6P5S7 137 aaKnown RBP9.46□□□□□ -0.9
VPS25-201ENST00000253794 OR5A1Q8NGJ0 315 aa9.46□□□□□ -0.9
VPS25-201ENST00000253794 TOMM6Q96B49 74 aa9.46□□□□□ -0.9
VPS25-201ENST00000253794 HIST1H2BKO60814 126 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 HIST1H2BJP06899 126 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 HIST1H2BOP23527 126 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 HIST1H2BBP33778 126 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 HIST1H2BDP58876 126 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 HIST1H2BCP62807 126 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 REG3AQ06141 175 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 HIST2H2BEQ16778 126 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.45□□□□□ -0.9
VPS25-201ENST00000253794 LINC00269Q8N2A0 174 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 ZNF664Q8N3J9 261 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 HIST1H2BHQ93079 126 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 HIST1H2BNQ99877 126 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 HIST1H2BMQ99879 126 aa9.45□□□□□ -0.9
VPS25-201ENST00000253794 A0A096LNJ9 63 aa9.44□□□□□ -0.9
VPS25-201ENST00000253794 IGIPA6NJ69 53 aa9.44□□□□□ -0.9
VPS25-201ENST00000253794 RTL8CO15255 209 aa9.44□□□□□ -0.9
VPS25-201ENST00000253794 CRPP02741 224 aa9.44□□□□□ -0.9
VPS25-201ENST00000253794 DGAT2L7PQ6IED9 249 aa9.44□□□□□ -0.9
VPS25-201ENST00000253794 UBE2WQ96B02 151 aa9.44□□□□□ -0.9
VPS25-201ENST00000253794 TIMM17AQ99595 171 aa9.44□□□□□ -0.9
VPS25-201ENST00000253794 TRAV8-4A0A0B4J246 113 aa9.43□□□□□ -0.9
VPS25-201ENST00000253794 LINC00310P59036 64 aa9.43□□□□□ -0.9
VPS25-201ENST00000253794 BAGE3Q86Y29 109 aa9.43□□□□□ -0.9
VPS25-201ENST00000253794 RMI2Q96E14 147 aa9.43□□□□□ -0.9
VPS25-201ENST00000253794 COX11Q9Y6N1 276 aa9.43□□□□□ -0.9
VPS25-201ENST00000253794 IGLV4-3A0A075B6K6 122 aa9.42□□□□□ -0.9
VPS25-201ENST00000253794 CCL25O15444 150 aa9.42□□□□□ -0.9
VPS25-201ENST00000253794 HBDP02042 147 aa9.42□□□□□ -0.9
VPS25-201ENST00000253794 Q6ZUT4 128 aa9.42□□□□□ -0.9
VPS25-201ENST00000253794 ERASQ7Z444 233 aa9.42□□□□□ -0.9
VPS25-201ENST00000253794 TM2D2Q9BX73 214 aa9.42□□□□□ -0.9
VPS25-201ENST00000253794 PDZD11Q5EBL8 140 aa9.41□□□□□ -0.9
VPS25-201ENST00000253794 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
VPS25-201ENST00000253794 TMEM141Q96I45 108 aa9.41□□□□□ -0.9
VPS25-201ENST00000253794 Q9HAA7 133 aa9.41□□□□□ -0.9
VPS25-201ENST00000253794 C1orf196B1AJZ1 125 aa9.4□□□□□ -0.9
VPS25-201ENST00000253794 SERF1AO75920 110 aa9.4□□□□□ -0.9
VPS25-201ENST00000253794 COA6Q5JTJ3 125 aaKnown RBP9.4□□□□□ -0.9
VPS25-201ENST00000253794 LINC00336Q6ZUF6 198 aa9.4□□□□□ -0.9
VPS25-201ENST00000253794 AMELXQ99217 191 aa9.4□□□□□ -0.9
VPS25-201ENST00000253794 LINC00959A0A1B0GUT2 108 aa9.39□□□□□ -0.91
VPS25-201ENST00000253794 HSBP1O75506 76 aa9.39□□□□□ -0.91
VPS25-201ENST00000253794 PAPPA-AS1Q5QFB9 102 aa9.39□□□□□ -0.91
VPS25-201ENST00000253794 CLPSL2Q6UWE3 100 aa9.39□□□□□ -0.91
VPS25-201ENST00000253794 SCGB3A1Q96QR1 104 aa9.39□□□□□ -0.91
VPS25-201ENST00000253794 OPRPNQ99935 248 aaPredicted RBP9.39□□□□□ -0.91
VPS25-201ENST00000253794 C1orf43Q9BWL3 253 aa9.39□□□□□ -0.91
VPS25-201ENST00000253794 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
VPS25-201ENST00000253794 LINC00173Q6ZV60 143 aa9.38□□□□□ -0.91
VPS25-201ENST00000253794 DNAH11Q96DT5 4516 aa9.38□□□□□ -0.91
VPS25-201ENST00000253794 PMCHL1Q16048 86 aa9.37□□□□□ -0.91
VPS25-201ENST00000253794 Q6ZN92 141 aa9.37□□□□□ -0.91
VPS25-201ENST00000253794 FAM19A3Q7Z5A8 133 aa9.37□□□□□ -0.91
VPS25-201ENST00000253794 HECTD4Q9Y4D8 3996 aa9.37□□□□□ -0.91
VPS25-201ENST00000253794 NUPR1O60356 82 aa9.36□□□□□ -0.91
VPS25-201ENST00000253794 SS18Q15532 418 aa9.36□□□□□ -0.91
VPS25-201ENST00000253794 RNASE13Q5GAN3 156 aaKnown RBP9.36□□□□□ -0.91
VPS25-201ENST00000253794 TEX43Q6ZNM6 134 aa9.36□□□□□ -0.91
VPS25-201ENST00000253794 MAPKAPK5-AS1Q8N8E1 139 aa9.36□□□□□ -0.91
VPS25-201ENST00000253794 CHCHD10Q8WYQ3 142 aaPredicted RBP9.36□□□□□ -0.91
VPS25-201ENST00000253794 PKD1P98161 4303 aa9.35□□□□□ -0.91
VPS25-201ENST00000253794 IGLV10-54A0A075B6I4 117 aa9.35□□□□□ -0.91
VPS25-201ENST00000253794 LRCOL1A6NCL2 159 aa9.35□□□□□ -0.91
VPS25-201ENST00000253794 IFITM10A6NMD0 228 aa9.35□□□□□ -0.91
VPS25-201ENST00000253794 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.35□□□□□ -0.91
VPS25-201ENST00000253794 ATP5LO75964 103 aa9.35□□□□□ -0.91
VPS25-201ENST00000253794 VCX2Q9H322 139 aa9.35□□□□□ -0.91
VPS25-201ENST00000253794 IGKV3OR2-268A0A0C4DH90 116 aa9.34□□□□□ -0.91
VPS25-201ENST00000253794 PSCAO43653 123 aa9.34□□□□□ -0.91
VPS25-201ENST00000253794 UBE2D1P51668 147 aa9.34□□□□□ -0.91
VPS25-201ENST00000253794 CD164L2Q6UWJ8 174 aa9.34□□□□□ -0.91
VPS25-201ENST00000253794 FAM19A2Q8N3H0 131 aa9.34□□□□□ -0.91
VPS25-201ENST00000253794 BAALCQ8WXS3 180 aa9.34□□□□□ -0.91
VPS25-201ENST00000253794 PACRGQ96M98 296 aaPredicted RBP9.34□□□□□ -0.91
VPS25-201ENST00000253794 C2orf88Q9BSF0 95 aa9.34□□□□□ -0.91
VPS25-201ENST00000253794 TRAV13-1A0A0B4J241 112 aa9.33□□□□□ -0.92
VPS25-201ENST00000253794 PRSS29PA6NIE9 313 aa9.33□□□□□ -0.92
VPS25-201ENST00000253794 TNP2Q05952 138 aa9.33□□□□□ -0.92
VPS25-201ENST00000253794 FOXI1Q12951 378 aa9.33□□□□□ -0.92
VPS25-201ENST00000253794 A0A087WTM6 91 aa9.32□□□□□ -0.92
VPS25-201ENST00000253794 GAGE12HA6NDE8 117 aa9.32□□□□□ -0.92
VPS25-201ENST00000253794 PMVKQ15126 192 aa9.32□□□□□ -0.92
VPS25-201ENST00000253794 LINC00242Q5T6M2 205 aa9.32□□□□□ -0.92
VPS25-201ENST00000253794 CST9LQ9H4G1 147 aa9.32□□□□□ -0.92
VPS25-201ENST00000253794 IGHV3OR16-9A0A0B4J2B5 98 aa9.31□□□□□ -0.92
VPS25-201ENST00000253794 A0A1B0GVY2 172 aa9.31□□□□□ -0.92
VPS25-201ENST00000253794 LEPROTL1O95214 131 aa9.31□□□□□ -0.92
VPS25-201ENST00000253794 XCL1P47992 114 aa9.31□□□□□ -0.92
VPS25-201ENST00000253794 ZC2HC1BQ5TFG8 222 aa9.31□□□□□ -0.92
VPS25-201ENST00000253794 TRAV12-1A0A0B4J245 112 aa9.3□□□□□ -0.92
VPS25-201ENST00000253794 NDUFA6P56556 154 aa9.3□□□□□ -0.92
VPS25-201ENST00000253794 SEC11AP67812 179 aa9.3□□□□□ -0.92
VPS25-201ENST00000253794 IFI27L1Q96BM0 104 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms