RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 CFAP161Q6P656 301 aa13.62□□□□□ -0.23
HCFC1R1-201ENST00000248089 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.61□□□□□ -0.23
HCFC1R1-201ENST00000248089 PPP1R2P9O14990 202 aa13.61□□□□□ -0.23
HCFC1R1-201ENST00000248089 S100A8P05109 93 aa13.61□□□□□ -0.23
HCFC1R1-201ENST00000248089 CKS2P33552 79 aa13.61□□□□□ -0.23
HCFC1R1-201ENST00000248089 XCL1P47992 114 aa13.61□□□□□ -0.23
HCFC1R1-201ENST00000248089 HIGD2BQ4VC39 106 aa13.61□□□□□ -0.23
HCFC1R1-201ENST00000248089 KIR2DL4Q99706 377 aa13.61□□□□□ -0.23
HCFC1R1-201ENST00000248089 DMBT1Q9UGM3 2413 aaPredicted RBP13.61□□□□□ -0.23
HCFC1R1-201ENST00000248089 MRPL52Q86TS9 123 aaKnown RBP13.6□□□□□ -0.23
HCFC1R1-201ENST00000248089 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.6□□□□□ -0.23
HCFC1R1-201ENST00000248089 IGHV3-64A0A075B6Q5 118 aa13.59□□□□□ -0.23
HCFC1R1-201ENST00000248089 LINC00959A0A1B0GUT2 108 aa13.59□□□□□ -0.23
HCFC1R1-201ENST00000248089 F8W036 122 aa13.59□□□□□ -0.23
HCFC1R1-201ENST00000248089 CCL25O15444 150 aa13.59□□□□□ -0.23
HCFC1R1-201ENST00000248089 SLPIP03973 132 aa13.59□□□□□ -0.23
HCFC1R1-201ENST00000248089 A0A1B0GXF2 115 aa13.58□□□□□ -0.24
HCFC1R1-201ENST00000248089 LINC00862A6NCI5 91 aa13.58□□□□□ -0.24
HCFC1R1-201ENST00000248089 FOXI1Q12951 378 aa13.58□□□□□ -0.24
HCFC1R1-201ENST00000248089 SDIM1Q6ZPB5 146 aa13.58□□□□□ -0.24
HCFC1R1-201ENST00000248089 CDC42SE2Q9NRR3 84 aa13.58□□□□□ -0.24
HCFC1R1-201ENST00000248089 D6R8Y8 96 aa13.57□□□□□ -0.24
HCFC1R1-201ENST00000248089 PANO1I0J062 215 aa13.57□□□□□ -0.24
HCFC1R1-201ENST00000248089 SS18Q15532 418 aa13.57□□□□□ -0.24
HCFC1R1-201ENST00000248089 ZNF664Q8N3J9 261 aa13.57□□□□□ -0.24
HCFC1R1-201ENST00000248089 TNFRSF6BO95407 300 aa13.56□□□□□ -0.24
HCFC1R1-201ENST00000248089 C20orf78Q9BR46 151 aa13.56□□□□□ -0.24
HCFC1R1-201ENST00000248089 SMAGPQ0VAQ4 97 aa13.55□□□□□ -0.24
HCFC1R1-201ENST00000248089 PNRC1Q12796 327 aaPredicted RBP13.55□□□□□ -0.24
HCFC1R1-201ENST00000248089 RNASE13Q5GAN3 156 aaKnown RBP13.55□□□□□ -0.24
HCFC1R1-201ENST00000248089 UBE2D4Q9Y2X8 147 aa13.55□□□□□ -0.24
HCFC1R1-201ENST00000248089 TRBV24-1A0A075B6N3 115 aa13.54□□□□□ -0.24
HCFC1R1-201ENST00000248089 ATP5L2Q7Z4Y8 100 aa13.54□□□□□ -0.24
HCFC1R1-201ENST00000248089 SMIM2Q9BVW6 85 aa13.54□□□□□ -0.24
HCFC1R1-201ENST00000248089 GVQW2A0A096LPI5 108 aaPredicted RBP13.53□□□□□ -0.24
HCFC1R1-201ENST00000248089 NPYP01303 97 aa13.53□□□□□ -0.24
HCFC1R1-201ENST00000248089 TMEM18Q96B42 140 aa13.53□□□□□ -0.24
HCFC1R1-201ENST00000248089 CHTF8P0CG12 524 aa13.52□□□□□ -0.25
HCFC1R1-201ENST00000248089 RPL32P62910 135 aaKnown RBP13.52□□□□□ -0.25
HCFC1R1-201ENST00000248089 Q6ZUT4 128 aa13.52□□□□□ -0.25
HCFC1R1-201ENST00000248089 DPH3Q96FX2 82 aa13.52□□□□□ -0.25
HCFC1R1-201ENST00000248089 HERC1Q15751 4861 aa13.51□□□□□ -0.25
HCFC1R1-201ENST00000248089 MT-ND4LP03901 98 aa13.51□□□□□ -0.25
HCFC1R1-201ENST00000248089 RPL37AP61513 92 aaKnown RBP13.51□□□□□ -0.25
HCFC1R1-201ENST00000248089 CLLU1Q5K131 121 aa13.51□□□□□ -0.25
HCFC1R1-201ENST00000248089 CD164L2Q6UWJ8 174 aa13.51□□□□□ -0.25
HCFC1R1-201ENST00000248089 CSDC2Q9Y534 153 aaKnown RBP13.51□□□□□ -0.25
HCFC1R1-201ENST00000248089 IGHV1-58A0A0C4DH39 117 aa13.5□□□□□ -0.25
HCFC1R1-201ENST00000248089 TCAPO15273 167 aa13.5□□□□□ -0.25
HCFC1R1-201ENST00000248089 PPBPP02775 128 aa13.5□□□□□ -0.25
HCFC1R1-201ENST00000248089 KRTAP10-4P60372 401 aaPredicted RBP13.5□□□□□ -0.25
HCFC1R1-201ENST00000248089 RPL39P62891 51 aaKnown RBP13.5□□□□□ -0.25
HCFC1R1-201ENST00000248089 ORMDL3Q8N138 153 aa13.5□□□□□ -0.25
HCFC1R1-201ENST00000248089 ANAPC16Q96DE5 110 aa13.5□□□□□ -0.25
HCFC1R1-201ENST00000248089 LINC00526Q96FQ7 95 aa13.5□□□□□ -0.25
HCFC1R1-201ENST00000248089 TRAV13-1A0A0B4J241 112 aa13.49□□□□□ -0.25
HCFC1R1-201ENST00000248089 COX6A2Q02221 97 aa13.49□□□□□ -0.25
HCFC1R1-201ENST00000248089 PHOX2AO14813 284 aa13.48□□□□□ -0.25
HCFC1R1-201ENST00000248089 CIRBPQ14011 172 aaKnown RBP13.48□□□□□ -0.25
HCFC1R1-201ENST00000248089 SPACA4Q8TDM5 124 aa13.48□□□□□ -0.25
HCFC1R1-201ENST00000248089 PRELID3AQ96N28 172 aa13.48□□□□□ -0.25
HCFC1R1-201ENST00000248089 TIMM21Q9BVV7 248 aa13.48□□□□□ -0.25
HCFC1R1-201ENST00000248089 C1orf196B1AJZ1 125 aa13.47□□□□□ -0.25
HCFC1R1-201ENST00000248089 TMEM136Q6ZRR5 245 aa13.47□□□□□ -0.25
HCFC1R1-201ENST00000248089 A0A087WYN8 130 aa13.46□□□□□ -0.25
HCFC1R1-201ENST00000248089 IGKV2-24A0A0C4DH68 120 aa13.46□□□□□ -0.25
HCFC1R1-201ENST00000248089 J3QL48 77 aa13.46□□□□□ -0.25
HCFC1R1-201ENST00000248089 MALP21145 153 aa13.46□□□□□ -0.25
HCFC1R1-201ENST00000248089 PRSS3P2Q8NHM4 247 aa13.46□□□□□ -0.25
HCFC1R1-201ENST00000248089 ZNF561-AS1K7EIQ3 104 aa13.45□□□□□ -0.26
HCFC1R1-201ENST00000248089 COX7A2LO14548 114 aa13.45□□□□□ -0.26
HCFC1R1-201ENST00000248089 RAB5AP20339 215 aa13.44□□□□□ -0.26
HCFC1R1-201ENST00000248089 CARD19Q96LW7 228 aa13.44□□□□□ -0.26
HCFC1R1-201ENST00000248089 IFITM2Q01629 132 aa13.43□□□□□ -0.26
HCFC1R1-201ENST00000248089 MAJINQ3KP22 176 aa13.43□□□□□ -0.26
HCFC1R1-201ENST00000248089 SPANXA1Q9NS26 97 aa13.43□□□□□ -0.26
HCFC1R1-201ENST00000248089 LOC389332A0A1B0GUA5 103 aa13.42□□□□□ -0.26
HCFC1R1-201ENST00000248089 OPRPNQ99935 248 aaPredicted RBP13.42□□□□□ -0.26
HCFC1R1-201ENST00000248089 ADCYAP1P18509 176 aa13.41□□□□□ -0.26
HCFC1R1-201ENST00000248089 UQCC3Q6UW78 93 aa13.41□□□□□ -0.26
HCFC1R1-201ENST00000248089 C5orf38Q86SI9 138 aa13.41□□□□□ -0.26
HCFC1R1-201ENST00000248089 MAP1LC3AQ9H492 121 aa13.41□□□□□ -0.26
HCFC1R1-201ENST00000248089 A0A096LNI7 61 aa13.4□□□□□ -0.26
HCFC1R1-201ENST00000248089 SYCNQ0VAF6 134 aa13.4□□□□□ -0.26
HCFC1R1-201ENST00000248089 LAMTOR2Q9Y2Q5 125 aa13.4□□□□□ -0.26
HCFC1R1-201ENST00000248089 IGLV4-69A0A075B6H9 119 aa13.39□□□□□ -0.27
HCFC1R1-201ENST00000248089 IFITM10A6NMD0 228 aa13.39□□□□□ -0.27
HCFC1R1-201ENST00000248089 FAM104AQ969W3 186 aa13.39□□□□□ -0.27
HCFC1R1-201ENST00000248089 PLAC8Q9NZF1 115 aa13.39□□□□□ -0.27
HCFC1R1-201ENST00000248089 PKIGQ9Y2B9 76 aa13.39□□□□□ -0.27
HCFC1R1-201ENST00000248089 TMEM218A2RU14 115 aa13.38□□□□□ -0.27
HCFC1R1-201ENST00000248089 KRTAP29-1A8MX34 341 aaPredicted RBP13.38□□□□□ -0.27
HCFC1R1-201ENST00000248089 IFI27P40305 119 aaPredicted RBP13.38□□□□□ -0.27
HCFC1R1-201ENST00000248089 MRPS36P82909 103 aaKnown RBP13.38□□□□□ -0.27
HCFC1R1-201ENST00000248089 APOMO95445 188 aa13.37□□□□□ -0.27
HCFC1R1-201ENST00000248089 HNRNPA3P51991 378 aaKnown RBP13.37□□□□□ -0.27
HCFC1R1-201ENST00000248089 STPG4Q8N801 248 aa13.37□□□□□ -0.27
HCFC1R1-201ENST00000248089 Q6ZRU5 148 aa13.36□□□□□ -0.27
HCFC1R1-201ENST00000248089 C7orf33Q8WU49 177 aa13.36□□□□□ -0.27
HCFC1R1-201ENST00000248089 CAMK2N2Q96S95 79 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms