RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 TINCRA0A1B0GVN0 87 aa12.43□□□□□ -0.42
LRFN3-201ENST00000246529 IGHV1-58A0A0C4DH39 117 aa12.43□□□□□ -0.42
LRFN3-201ENST00000246529 IGLV1-51P01701 117 aa12.43□□□□□ -0.42
LRFN3-201ENST00000246529 C19orf73Q9NVV2 129 aa12.43□□□□□ -0.42
LRFN3-201ENST00000246529 CIDEAO60543 219 aa12.42□□□□□ -0.42
LRFN3-201ENST00000246529 NDUFA7O95182 113 aa12.42□□□□□ -0.42
LRFN3-201ENST00000246529 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.42□□□□□ -0.42
LRFN3-201ENST00000246529 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
LRFN3-201ENST00000246529 K7EQD1 137 aa12.42□□□□□ -0.42
LRFN3-201ENST00000246529 UBE2D3P61077 147 aa12.42□□□□□ -0.42
LRFN3-201ENST00000246529 UBE2D2P62837 147 aa12.42□□□□□ -0.42
LRFN3-201ENST00000246529 GAGE4Q13068 117 aa12.42□□□□□ -0.42
LRFN3-201ENST00000246529 GAGE5Q13069 117 aa12.42□□□□□ -0.42
LRFN3-201ENST00000246529 NTM-AS1Q6ZSK4 140 aa12.42□□□□□ -0.42
LRFN3-201ENST00000246529 VSIG2Q96IQ7 327 aa12.42□□□□□ -0.42
LRFN3-201ENST00000246529 DGAT2L7PQ6IED9 249 aa12.41□□□□□ -0.42
LRFN3-201ENST00000246529 GEMIN7Q9H840 131 aaKnown RBP12.41□□□□□ -0.42
LRFN3-201ENST00000246529 CDKN2A-AS1Q9UH64 79 aa12.41□□□□□ -0.42
LRFN3-201ENST00000246529 PRO1854Q9UHT4 67 aa12.41□□□□□ -0.42
LRFN3-201ENST00000246529 KMT2BQ9UMN6 2715 aaPredicted RBP12.41□□□□□ -0.42
LRFN3-201ENST00000246529 PLAC8L1A1L4L8 177 aa12.41□□□□□ -0.42
LRFN3-201ENST00000246529 H7C2G1 150 aa12.41□□□□□ -0.42
LRFN3-201ENST00000246529 HILS1P60008 231 aa12.41□□□□□ -0.42
LRFN3-201ENST00000246529 ZNF418Q8TF45 676 aaPredicted RBP12.41□□□□□ -0.42
LRFN3-201ENST00000246529 LITAFQ99732 161 aa12.41□□□□□ -0.42
LRFN3-201ENST00000246529 NDUFA12Q9UI09 145 aa12.41□□□□□ -0.42
LRFN3-201ENST00000246529 C2CD3Q4AC94 2353 aa12.4□□□□□ -0.42
LRFN3-201ENST00000246529 GAGE7O76087 117 aa12.4□□□□□ -0.42
LRFN3-201ENST00000246529 GAGE12FP0CL80 117 aa12.4□□□□□ -0.42
LRFN3-201ENST00000246529 GAGE12GP0CL81 117 aa12.4□□□□□ -0.42
LRFN3-201ENST00000246529 GAGE12IP0CL82 117 aa12.4□□□□□ -0.42
LRFN3-201ENST00000246529 COX6A2Q02221 97 aa12.4□□□□□ -0.42
LRFN3-201ENST00000246529 ADAMTSL4-AS1Q5T5F5 129 aa12.4□□□□□ -0.42
LRFN3-201ENST00000246529 TRAV4A0A0B4J268 109 aa12.39□□□□□ -0.43
LRFN3-201ENST00000246529 SMCPP49901 116 aaPredicted RBP12.39□□□□□ -0.43
LRFN3-201ENST00000246529 KRTAP10-3P60369 221 aa12.39□□□□□ -0.43
LRFN3-201ENST00000246529 RPL36AP83881 106 aaKnown RBP12.39□□□□□ -0.43
LRFN3-201ENST00000246529 RPL36ALQ969Q0 106 aaKnown RBP12.39□□□□□ -0.43
LRFN3-201ENST00000246529 TCL1BO95988 128 aa12.39□□□□□ -0.43
LRFN3-201ENST00000246529 NPC2P61916 151 aa12.39□□□□□ -0.43
LRFN3-201ENST00000246529 LOC100131303A0A0U1RQF7 123 aa12.38□□□□□ -0.43
LRFN3-201ENST00000246529 PRSS2P07478 247 aa12.38□□□□□ -0.43
LRFN3-201ENST00000246529 INSL3P51460 131 aa12.38□□□□□ -0.43
LRFN3-201ENST00000246529 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
LRFN3-201ENST00000246529 TRGV2A0A075B6R0 118 aa12.37□□□□□ -0.43
LRFN3-201ENST00000246529 CSNK1G2-AS1Q8NCQ2 148 aa12.37□□□□□ -0.43
LRFN3-201ENST00000246529 IGHV3-33P01772 117 aa12.36□□□□□ -0.43
LRFN3-201ENST00000246529 DAZ2Q13117 558 aaKnown RBP12.36□□□□□ -0.43
LRFN3-201ENST00000246529 GCN1Q92616 2671 aaKnown RBP12.36□□□□□ -0.43
LRFN3-201ENST00000246529 HIVEP2P31629 2446 aa12.36□□□□□ -0.43
LRFN3-201ENST00000246529 TRBV10-1A0A0K0K1A3 114 aa12.36□□□□□ -0.43
LRFN3-201ENST00000246529 SCGB1C2P0DMR2 95 aa12.36□□□□□ -0.43
LRFN3-201ENST00000246529 C16orf74Q96GX8 76 aa12.36□□□□□ -0.43
LRFN3-201ENST00000246529 TRAV13-1A0A0B4J241 112 aa12.35□□□□□ -0.43
LRFN3-201ENST00000246529 CMC4P56277 68 aaPredicted RBP12.35□□□□□ -0.43
LRFN3-201ENST00000246529 LINC00242Q5T6M2 205 aa12.35□□□□□ -0.43
LRFN3-201ENST00000246529 TMEM101Q96IK0 257 aa12.35□□□□□ -0.43
LRFN3-201ENST00000246529 DAZ4Q86SG3 579 aaKnown RBP12.34□□□□□ -0.43
LRFN3-201ENST00000246529 DAND5Q8N907 189 aa12.34□□□□□ -0.43
LRFN3-201ENST00000246529 DAZ3Q9NR90 486 aaKnown RBP12.34□□□□□ -0.43
LRFN3-201ENST00000246529 ZFAND6Q6FIF0 208 aa12.34□□□□□ -0.43
LRFN3-201ENST00000246529 A0A0B4J2C4 111 aa12.33□□□□□ -0.44
LRFN3-201ENST00000246529 TIRAPP58753 221 aa12.33□□□□□ -0.44
LRFN3-201ENST00000246529 SBSPONQ8IVN8 264 aa12.33□□□□□ -0.44
LRFN3-201ENST00000246529 ERG28Q9UKR5 140 aa12.33□□□□□ -0.44
LRFN3-201ENST00000246529 NOTCH2Q04721 2471 aa12.33□□□□□ -0.44
LRFN3-201ENST00000246529 IGLV5-45A0A087WSX0 123 aa12.33□□□□□ -0.44
LRFN3-201ENST00000246529 VWFP04275 2813 aa12.32□□□□□ -0.44
LRFN3-201ENST00000246529 Q1RN00 199 aa12.32□□□□□ -0.44
LRFN3-201ENST00000246529 LYRM7Q5U5X0 104 aa12.32□□□□□ -0.44
LRFN3-201ENST00000246529 FAM110AQ9BQ89 295 aa12.32□□□□□ -0.44
LRFN3-201ENST00000246529 ZNF625Q96I27 306 aaPredicted RBP12.31□□□□□ -0.44
LRFN3-201ENST00000246529 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.31□□□□□ -0.44
LRFN3-201ENST00000246529 MIAQ16674 131 aa12.31□□□□□ -0.44
LRFN3-201ENST00000246529 SPATA3Q8NHX4 192 aa12.31□□□□□ -0.44
LRFN3-201ENST00000246529 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
LRFN3-201ENST00000246529 SPANXDQ9BXN6 97 aa12.31□□□□□ -0.44
LRFN3-201ENST00000246529 SPANXCQ9NY87 97 aa12.31□□□□□ -0.44
LRFN3-201ENST00000246529 OTOGQ6ZRI0 2925 aa12.3□□□□□ -0.44
LRFN3-201ENST00000246529 LY6G6DO95868 133 aa12.3□□□□□ -0.44
LRFN3-201ENST00000246529 CDC42SE2Q9NRR3 84 aa12.3□□□□□ -0.44
LRFN3-201ENST00000246529 TRGV4A0A0C4DH28 118 aa12.3□□□□□ -0.44
LRFN3-201ENST00000246529 PF4P02776 101 aa12.3□□□□□ -0.44
LRFN3-201ENST00000246529 TRBV20-1A0A075B6N2 111 aa12.29□□□□□ -0.44
LRFN3-201ENST00000246529 A0A0U1RRA0 63 aa12.29□□□□□ -0.44
LRFN3-201ENST00000246529 HERVK_113P63121 156 aa12.29□□□□□ -0.44
LRFN3-201ENST00000246529 OVOL2Q9BRP0 275 aa12.29□□□□□ -0.44
LRFN3-201ENST00000246529 UBE2L6O14933 153 aa12.28□□□□□ -0.44
LRFN3-201ENST00000246529 NDUFA1O15239 70 aa12.28□□□□□ -0.44
LRFN3-201ENST00000246529 TMEM243Q9BU79 118 aa12.28□□□□□ -0.44
LRFN3-201ENST00000246529 Q9H8V8 135 aa12.28□□□□□ -0.44
LRFN3-201ENST00000246529 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
LRFN3-201ENST00000246529 SMIM1B2RUZ4 78 aa12.28□□□□□ -0.44
LRFN3-201ENST00000246529 NBEAL2Q6ZNJ1 2754 aa12.28□□□□□ -0.44
LRFN3-201ENST00000246529 IGLV5-39A0A0G2JS06 123 aa12.27□□□□□ -0.45
LRFN3-201ENST00000246529 LINC00482Q8N8I6 264 aa12.27□□□□□ -0.45
LRFN3-201ENST00000246529 TRBV6-4A0A1B0GX49 114 aa12.27□□□□□ -0.45
LRFN3-201ENST00000246529 J3QR89 54 aa12.27□□□□□ -0.45
LRFN3-201ENST00000246529 FHL2Q14192 279 aa12.27□□□□□ -0.45
LRFN3-201ENST00000246529 DEFB130BP0DP73 79 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms