RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 TMEM18Q96B42 140 aa13.57□□□□□ -0.24
SNRPA-201ENST00000243563 TIMM21Q9BVV7 248 aa13.57□□□□□ -0.24
SNRPA-201ENST00000243563 IGLV4-3A0A075B6K6 122 aa13.57□□□□□ -0.24
SNRPA-201ENST00000243563 ANGP03950 147 aaKnown RBP13.57□□□□□ -0.24
SNRPA-201ENST00000243563 LINC00269Q8N2A0 174 aa13.57□□□□□ -0.24
SNRPA-201ENST00000243563 CDC42SE2Q9NRR3 84 aa13.57□□□□□ -0.24
SNRPA-201ENST00000243563 SPANXA1Q9NS26 97 aa13.57□□□□□ -0.24
SNRPA-201ENST00000243563 RYR2Q92736 4967 aa13.56□□□□□ -0.24
SNRPA-201ENST00000243563 ZNF25P17030 456 aaPredicted RBP13.56□□□□□ -0.24
SNRPA-201ENST00000243563 OR5A1Q8NGJ0 315 aa13.56□□□□□ -0.24
SNRPA-201ENST00000243563 TMA7Q9Y2S6 64 aaKnown RBP13.56□□□□□ -0.24
SNRPA-201ENST00000243563 ENHOQ6UWT2 76 aa13.55□□□□□ -0.24
SNRPA-201ENST00000243563 SCGB3A1Q96QR1 104 aa13.55□□□□□ -0.24
SNRPA-201ENST00000243563 PYGO1Q9Y3Y4 419 aa13.55□□□□□ -0.24
SNRPA-201ENST00000243563 CSDC2Q9Y534 153 aaKnown RBP13.55□□□□□ -0.24
SNRPA-201ENST00000243563 PKIAP61925 76 aa13.54□□□□□ -0.24
SNRPA-201ENST00000243563 Q6ZR54 194 aa13.54□□□□□ -0.24
SNRPA-201ENST00000243563 ZNF664Q8N3J9 261 aa13.54□□□□□ -0.24
SNRPA-201ENST00000243563 DNAH10Q8IVF4 4471 aa13.54□□□□□ -0.24
SNRPA-201ENST00000243563 DGAT2L7PQ6IED9 249 aa13.53□□□□□ -0.24
SNRPA-201ENST00000243563 ERASQ7Z444 233 aa13.53□□□□□ -0.24
SNRPA-201ENST00000243563 TMEM101Q96IK0 257 aa13.53□□□□□ -0.24
SNRPA-201ENST00000243563 IGKV3OR2-268A0A0C4DH90 116 aa13.53□□□□□ -0.24
SNRPA-201ENST00000243563 IBA57-AS1B1ANH7 110 aa13.53□□□□□ -0.24
SNRPA-201ENST00000243563 UBE2WQ96B02 151 aa13.53□□□□□ -0.24
SNRPA-201ENST00000243563 TIMM17AQ99595 171 aa13.53□□□□□ -0.24
SNRPA-201ENST00000243563 PRR34Q9NV39 138 aa13.53□□□□□ -0.24
SNRPA-201ENST00000243563 DNAH2Q9P225 4427 aa13.52□□□□□ -0.24
SNRPA-201ENST00000243563 MRPS36P82909 103 aaKnown RBP13.52□□□□□ -0.25
SNRPA-201ENST00000243563 FABP4P15090 132 aa13.51□□□□□ -0.25
SNRPA-201ENST00000243563 G0S2P27469 103 aa13.51□□□□□ -0.25
SNRPA-201ENST00000243563 REG3AQ06141 175 aa13.51□□□□□ -0.25
SNRPA-201ENST00000243563 Q9HAA7 133 aa13.51□□□□□ -0.25
SNRPA-201ENST00000243563 SNRPEP62304 92 aaKnown RBP13.5□□□□□ -0.25
SNRPA-201ENST00000243563 HIST3H2BBQ8N257 126 aa13.5□□□□□ -0.25
SNRPA-201ENST00000243563 TMEM141Q96I45 108 aa13.5□□□□□ -0.25
SNRPA-201ENST00000243563 BAALCQ8WXS3 180 aa13.5□□□□□ -0.25
SNRPA-201ENST00000243563 IFITM10A6NMD0 228 aa13.49□□□□□ -0.25
SNRPA-201ENST00000243563 C10orf126Q8N4M7 172 aa13.49□□□□□ -0.25
SNRPA-201ENST00000243563 AMELXQ99217 191 aa13.49□□□□□ -0.25
SNRPA-201ENST00000243563 IGLV10-54A0A075B6I4 117 aa13.48□□□□□ -0.25
SNRPA-201ENST00000243563 TRAV9-2A0A087WT02 112 aa13.48□□□□□ -0.25
SNRPA-201ENST00000243563 LEPROTL1O95214 131 aa13.48□□□□□ -0.25
SNRPA-201ENST00000243563 S100A6P06703 90 aa13.48□□□□□ -0.25
SNRPA-201ENST00000243563 SMAGPQ0VAQ4 97 aa13.48□□□□□ -0.25
SNRPA-201ENST00000243563 TTC32Q5I0X7 151 aa13.48□□□□□ -0.25
SNRPA-201ENST00000243563 C5orf52A6NGY3 159 aa13.47□□□□□ -0.25
SNRPA-201ENST00000243563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.47□□□□□ -0.25
SNRPA-201ENST00000243563 LINC00959A0A1B0GUT2 108 aa13.46□□□□□ -0.25
SNRPA-201ENST00000243563 PRSS29PA6NIE9 313 aa13.46□□□□□ -0.25
SNRPA-201ENST00000243563 IFI27L1Q96BM0 104 aa13.46□□□□□ -0.25
SNRPA-201ENST00000243563 TRAV13-1A0A0B4J241 112 aa13.46□□□□□ -0.26
SNRPA-201ENST00000243563 LINC01549A6NIU2 74 aa13.46□□□□□ -0.26
SNRPA-201ENST00000243563 CRPP02741 224 aa13.46□□□□□ -0.26
SNRPA-201ENST00000243563 K7EP13 123 aa13.45□□□□□ -0.26
SNRPA-201ENST00000243563 ATP5LO75964 103 aa13.45□□□□□ -0.26
SNRPA-201ENST00000243563 NPSP0C0P6 89 aa13.45□□□□□ -0.26
SNRPA-201ENST00000243563 KRTAP26-1Q6PEX3 210 aa13.45□□□□□ -0.26
SNRPA-201ENST00000243563 TEX43Q6ZNM6 134 aa13.45□□□□□ -0.26
SNRPA-201ENST00000243563 FRAS1Q86XX4 4008 aa13.44□□□□□ -0.26
SNRPA-201ENST00000243563 RYR3Q15413 4870 aa13.44□□□□□ -0.26
SNRPA-201ENST00000243563 VCX2Q9H322 139 aa13.44□□□□□ -0.26
SNRPA-201ENST00000243563 CST9LQ9H4G1 147 aa13.44□□□□□ -0.26
SNRPA-201ENST00000243563 Q6ZN92 141 aa13.43□□□□□ -0.26
SNRPA-201ENST00000243563 Q6ZRN7 208 aaPredicted RBP13.43□□□□□ -0.26
SNRPA-201ENST00000243563 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
SNRPA-201ENST00000243563 HIST1H2BLQ99880 126 aa13.43□□□□□ -0.26
SNRPA-201ENST00000243563 UBE2D1P51668 147 aa13.42□□□□□ -0.26
SNRPA-201ENST00000243563 MIAQ16674 131 aa13.42□□□□□ -0.26
SNRPA-201ENST00000243563 PMVKQ15126 192 aa13.42□□□□□ -0.26
SNRPA-201ENST00000243563 MAPKAPK5-AS1Q8N8E1 139 aa13.42□□□□□ -0.26
SNRPA-201ENST00000243563 CHCHD10Q8WYQ3 142 aaPredicted RBP13.42□□□□□ -0.26
SNRPA-201ENST00000243563 IGKV2D-24A0A075B6R9 120 aa13.41□□□□□ -0.26
SNRPA-201ENST00000243563 TRAV8-3A0A0A6YYJ7 113 aa13.41□□□□□ -0.26
SNRPA-201ENST00000243563 H0Y8G0 127 aa13.41□□□□□ -0.26
SNRPA-201ENST00000243563 CCL25O15444 150 aa13.41□□□□□ -0.26
SNRPA-201ENST00000243563 COX6A2Q02221 97 aa13.41□□□□□ -0.26
SNRPA-201ENST00000243563 HSPB8Q9UJY1 196 aa13.41□□□□□ -0.26
SNRPA-201ENST00000243563 LINC00242Q5T6M2 205 aa13.4□□□□□ -0.26
SNRPA-201ENST00000243563 C6orf223Q8N319 242 aa13.4□□□□□ -0.26
SNRPA-201ENST00000243563 A0A0J9YXV3 536 aa13.39□□□□□ -0.27
SNRPA-201ENST00000243563 PRSS1P07477 247 aa13.39□□□□□ -0.27
SNRPA-201ENST00000243563 XCL1P47992 114 aa13.39□□□□□ -0.27
SNRPA-201ENST00000243563 DNAH17Q9UFH2 4485 aa13.39□□□□□ -0.27
SNRPA-201ENST00000243563 PAPPA-AS1Q5QFB9 102 aa13.39□□□□□ -0.27
SNRPA-201ENST00000243563 PACRGQ96M98 296 aaPredicted RBP13.39□□□□□ -0.27
SNRPA-201ENST00000243563 C2orf88Q9BSF0 95 aa13.39□□□□□ -0.27
SNRPA-201ENST00000243563 C1orf43Q9BWL3 253 aa13.39□□□□□ -0.27
SNRPA-201ENST00000243563 IGLV4-69A0A075B6H9 119 aa13.38□□□□□ -0.27
SNRPA-201ENST00000243563 GAGE12HA6NDE8 117 aa13.38□□□□□ -0.27
SNRPA-201ENST00000243563 C3orf79P0CE67 100 aa13.38□□□□□ -0.27
SNRPA-201ENST00000243563 SS18Q15532 418 aa13.38□□□□□ -0.27
SNRPA-201ENST00000243563 TRAV8-4A0A0B4J246 113 aa13.37□□□□□ -0.27
SNRPA-201ENST00000243563 RTL8CO15255 209 aa13.37□□□□□ -0.27
SNRPA-201ENST00000243563 S100A2P29034 98 aa13.37□□□□□ -0.27
SNRPA-201ENST00000243563 FOXI1Q12951 378 aa13.37□□□□□ -0.27
SNRPA-201ENST00000243563 C1orf134Q5TEV5 83 aa13.37□□□□□ -0.27
SNRPA-201ENST00000243563 PMCHL2Q9BQD1 86 aa13.37□□□□□ -0.27
SNRPA-201ENST00000243563 ODF1Q14990 250 aa13.36□□□□□ -0.27
SNRPA-201ENST00000243563 FAM19A3Q7Z5A8 133 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms